Tuber melanosporum: GSTUM_00010524001
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Entry
GSTUM_00010524001 CDS
T01282
Name
(RefSeq) hypothetical protein
KO
K15172
transcription elongation factor SPT5
Organism
tml
Tuber melanosporum
Pathway
tml03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
tml00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
GSTUM_00010524001
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tml03021
]
GSTUM_00010524001
03019 Messenger RNA biogenesis [BR:
tml03019
]
GSTUM_00010524001
Transcription machinery [BR:
tml03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
GSTUM_00010524001
RNA polymerase I system
GSTUM_00010524001
Messenger RNA biogenesis [BR:
tml03019
]
Eukaryotic type
mRNA processing factors
3' end processing
DRB sensitivity inducing factor (DSIF) complex
GSTUM_00010524001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
KOW4_SPT5
Spt5-NGN
KOW5_SPT5
Spt5_N
KOWx_SPT5
KOW
KOW1_SPT5
KOW2_Spt5
CTD
DUF3912
Motif
Other DBs
NCBI-GeneID:
9187375
NCBI-ProteinID:
XP_002841400
INRA:
GSTUM_00010524001
UniProt:
D5GM48
LinkDB
All DBs
AA seq
1054 aa
AA seq
DB search
MSTSNLLNQDFDADEDDQDFDAGHLDQDAEGEPDDDAPPAGGQPDDDDEEDDEEDDEEDD
EEDEDDDLPQRKRARRPPRNQFLDIEADVSDEDEEDPDEDEEDGAEAGFIADDADRPELS
DLRQYPRDDHRHRELDRKHEAEQAEDMEQIAAGFKERHGRSARRRMEDSQVVPRRLLLPS
VNDPSIWGVKCKPGKEREIVFSILRKQEELANTKAPLQITSALERGNTMPGYIYVEAKKQ
ADVMHALQGVSFVYPMTKMILVPIKEMPDLLFVMKKAEITPGTWVRFKRGKYQGDLAQVE
NVLASGLEVKIRMVPRLDYGNGADADDPSGNKRKRNPFGKNGSLAGRPPQRLFSEVEARK
NHAKYLSQAAQGLKKIFTYLGDEYEDGYYIKDVKLNLIQTENVNPTLEEVSKFASGGDDG
TESLDLHALAQSLKKTVSTYQVGDTVEVYDGEQNGLVGKAVSVHGDIVTLDVLEGPLKGK
RTEVPFKGLRKRFNPGDHVKVTGGSRFRDEVGMVLRINEDRVTLISDVGMTEITVFSKDL
REASESGGMETGGKYDLHDLVQLDATTVACVTKVDRESVRIIDQLGNIRTIMPSQIASKL
SNRRPGVATDRNGSEIRVGDTVKETGGETRSGVILHIFRSFAFLHNREETSNAGVFVCRT
NNVATIAAKGGRITNTQSTGPDLTKMNPAMQRNGRSLDASAMPPPRTGGRDRTIGQTVTI
RQGPYKGLVGIVKDATDATARVELHTKNKIVTIEKAKLGFKDLHTGTIKSYQDFMRPGGR
GDGGGYSRTPSISSDRASSWSGSRTPQSSIPGSRTPAYNLGNKTPAWLSSSDGSRTPGYF
PGSKTPAYGMDGSRSSYAGNKTPAWNPSSRTPYASDTDRSTWDAGSKTPGRPNLDSFMDS
NSTSTNSSNNNTSYSARTPGASYNASSPDFIPPSYSKELSAPTPGGPISAPTPSGAMSAP
TPGPISAPTPRDAYGGTWGGPETAPTPAPYGAAPTPGASGSYGGGVGSGGSRDPRGGYYQ
GAPTPAAGYGNPRTPGVWAGGDDDEIRYAEPTTP
NT seq
3165 nt
NT seq
+upstream
nt +downstream
nt
atgagtacttctaatttactcaatcaagactttgatgccgacgaagacgaccaggatttc
gacgctggccacctggaccaagatgctgagggcgagcccgatgatgatgctccgcccgcg
ggaggccaaccagacgacgatgacgaggaagacgatgaagaggacgacgaggaggacgac
gaggaggacgaggacgatgacctgccgcaacgcaagcgtgctcgtagaccacctcgcaat
caattcctcgatattgaagccgatgtctccgacgaagacgaggaggatcccgacgaagac
gaagaagacggtgcggaagcaggctttatcgccgacgatgctgaccgcccagagctaagc
gacctccgccaataccctcgcgacgaccatcgccatcgtgagctcgatcgcaaacatgag
gctgagcaagcagaggacatggagcaaatcgccgctgggtttaaagaacgtcatggcaga
tcggctcggagacgtatggaggactcgcaggtagttcctagaaggctattattaccatcc
gttaatgatccgagcatttggggcgtcaagtgtaagcctggaaaggagagggaaattgtt
ttttcgattcttaggaagcaggaggaattagccaacacgaaggctcctctacagatcacc
tctgcactcgaacgcggtaatactatgcccgggtatatctacgtcgaagcaaagaagcaa
gcggacgttatgcatgcccttcaaggtgtctcttttgtctatcccatgacgaagatgatt
cttgtccctattaaggagatgccagaccttctttttgttatgaagaaagccgagatcaca
ccagggacatgggttcgttttaaacgtggaaaataccaaggcgatcttgctcaggttgaa
aacgtcttagctagtggcctcgaggtcaagattaggatggtacctaggttggactacggc
aacggggctgatgcagacgacccgagcggtaacaagcgaaagcgcaaccctttcggaaag
aatgggtcacttgccggacgccccccacagcgactattctccgaagttgaagccagaaag
aaccacgcaaagtatttgtcacaggcggcacagggattgaagaagattttcacctatctc
ggagatgaatatgaagacggatactatatcaaggacgttaaactcaaccttatacagacc
gaaaacgtcaatccaactctagaagaggtttccaagtttgcatctggaggggatgatggg
actgagagcttggatctccatgcgctggctcagtcactaaagaagactgtttccacgtac
caagttggtgatactgtcgaggtttatgatggcgagcagaatggtctcgtcgggaaagct
gttagtgttcacggcgacattgttacattggacgtgttggaaggcccattgaagggaaaa
cgcaccgaagttcctttcaaaggattaaggaagcgattcaatccaggagatcacgtcaag
gttaccggaggaagcagattcagagacgaagttggaatggttttgaggatcaatgaggac
agggtcactcttattagtgatgttggcatgaccgagatcactgtcttttccaaggatttg
agggaagctagtgagtctggaggcatggaaactggtgggaaatatgatctccacgatttg
gtacaacttgacgctactaccgttgcctgcgttaccaaagtcgacagagagtctgttaga
atcatcgatcaactcggcaacattagaacaatcatgccatctcagattgcaagcaagctt
tcaaaccgtcgcccgggcgtagccacagatcgaaatggctccgagatccgcgttggcgat
acagtcaaggaaaccggcggagagacccgatctggtgtcatcttgcatatctttagatct
tttgccttccttcacaatcgtgaagagacttcgaacgctggtgtgttcgtctgcaggact
aataatgtcgctaccatcgctgccaaggggggtagaattacgaatacccaatctaccggc
ccggaccttaccaagatgaaccctgctatgcaacgcaatgggcggtccctggatgcttct
gccatgccgcctccacgcactggtggaagagatagaaccattgggcagacggttacgatt
agacagggaccgtacaaaggactagtgggaattgtcaaggatgcgaccgacgctacggca
cgagtagagttgcacactaagaacaagattgtcacaatcgaaaaggcgaagttgggtttt
aaagaccttcacactggtactattaagtcttaccaagattttatgcgtcctggtggtcgt
ggagatggaggggggtatagtagaacgccctcaatatcctcggatagagcctcttcttgg
agcggtagcagaacccctcagtccagcattccgggatcgcgtacgccagcatataatctt
ggtaacaagactcctgcctggttgagctctagtgatggcagtcgtacacccggatacttt
cccggcagtaagacacctgcatatggtatggacggtagtagatcttcttatgctggaaac
aaaacacctgcttggaatccctcctctcgtactccctatgcctcagacaccgatcgtagc
acctgggacgctggctctaaaactcccggccgccctaaccttgattccttcatggattcc
aactccacctctacaaactcctctaacaacaatacctcctactctgcccgcactcctggt
gcctcttacaatgctagctccccagattttattccaccctcctatagcaaagagctctct
gcacccacccccggggggcctatttctgcgcccacccctagtggcgccatgtccgctccc
actcccggtccaatctctgccccgaccccgagagacgcttacggcggaacctggggcggt
ccggagactgctcccactcctgctccatacggcgctgctcctactcccggtgctagtgga
agctatggcggaggcgtcggtagtggcgggtctagagatcctcggggcggctattaccaa
ggtgctccaactcctgcagccggctatggaaatcctagaactccgggcgtctgggccggt
ggtgacgatgatgagattcgatacgcggagccaacaacaccttag
DBGET
integrated database retrieval system
