Tuber melanosporum: GSTUM_00010623001
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Entry
GSTUM_00010623001 CDS
T01282
Name
(RefSeq) hypothetical protein
KO
K02350
DNA polymerase zeta [EC:
2.7.7.7
]
Organism
tml
Tuber melanosporum
Pathway
tml03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
tml00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
GSTUM_00010623001
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tml03400
]
GSTUM_00010623001
Enzymes [BR:
tml01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
GSTUM_00010623001
DNA repair and recombination proteins [BR:
tml03400
]
Eukaryotic type
TLS (translesion DNA synthesis) factors
B-family DNA polymerases
GSTUM_00010623001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol_B
POL3_N
REV3_N
DNA_pol_B_exo1
zf-C4pol
divDNApol
Mltc_N
Motif
Other DBs
NCBI-GeneID:
9183225
NCBI-ProteinID:
XP_002841455
INRA:
GSTUM_00010623001
UniProt:
D5GMA3
LinkDB
All DBs
AA seq
1622 aa
AA seq
DB search
MAFRIRLNNIDSYQAYPTSLDPTFPHIPDDERPPKIPIVRVFGATETGQKVCAHIHGAFP
YLYVEYPGKSLMPEDDRAMGLSAGRSIRSQEKPPRFVAHISLVKGVPFYGFHVGWKFYCK
IYLFNPHMRGRLARILQSGGVLSRVFQPHEAHIQYIPQFMIDFNLNGCGFIECDKVLFRG
EIPDADEIGEQHIWHNKSIPEVSILPESQFQRQSYCTLEVDIHVRDIFNRKQVSARPLHF
DFVERTNPISPDIKLVHSMAELWKDENRRRGNNSNPAEGLVSSSSDQRGPSGTWIHEEEY
RERIKDIIKTERRVSDGRTLKFETYVSRAQFENLWPTAFESVAESFEGAGLPPDKKVELV
VEAEIAEVDESLVYDIGEGEFSDSDFEGLFDVMDDPGGEQSAKVKAEKSHEQVKRGLVWE
LQGRELKISSSPPMPEASNGEGRVEKSLSNNSQLTIAGGSFYEGLVEEFIEEEDDIVVTD
SRVWFPTSSVDPDVPTSYQVPSKRVKMESFSSNIESQMPPSSDCSDVPEKICSTSASVRR
DIPNGKSPALSNGHPSSAQPGCRFVDSVSENSKTRASISEPLQKSRKRAQPSSSRANDTP
RPEKIGRRGKVAVDLSNLPTRLDPTSSLRGAFDIPSNSSIRCYSQRAPSSSELLTSEDKE
EIAKVAYQEPYYSDDRDVPTKVWEYAGREFKFKSSKLSDLPIFNPNNENRIVWEYNRLNQ
RDPRFKMWNIAEAPPSRKEVAKLLEERKIVRKGKGARQSVAYEHNSFFASQIQGPTQKNK
YGFKFSQNAKSDNVQHELQHMSIMSLELHINTVGDFVPNAERDQIECIFWSLKEMEEGED
GEVKEVTRIGIITLVDEHNNDPNPGLKFRRQCRAEIRTETSELGMINTLIDTVRVLDPDI
LTGWEVNSSSWGYLIKRANQLFEMNLCDDLSRVKIETHSRFGKESNLWGFNTGSAIRITG
RHMVNIWRAMTAELNLLGYSMENVVFHLLHQRIPHYSFRVLTGWYTSGSPLLFGKVIKHL
VRKVQLDLEILDRQELITRTSEQARLLGIDFASVSGRGSQFKVESMMFRIAKPESFILVS
PSKAQVGQQNALECLPLVMEPFSRFYTSPVVVLDFQSLYPSVMIAHNYCYSTFLELCEKD
INIAPNGMMYIKQTIRKSLLAKMLTEILDTRVMVKNGMKRDKHDKALQKLLNSRQLALKL
IANVTYGYTSASHSGRMPCTEIADSIVQTGREILEKAIRLIQDDPNWDAEVVYGDTDSLF
IHLEGRTKDEAFRIGEEIAARVTEANPRPIKLKFEKVYLPCVLLAKKRYVGFKYEYREQA
EPDFDAKGIETVRRDGTPAEQMIEEAALKILFRTKDLSQVKAYCQREWTKIMREKAVRLG
TYAEGVSLPPGAQLAAKRVEKDPENAPQYAERIPYVVIAGSPGQTLADRTIEVNDLLASP
ELSLDSEYYICKNIIPPLERIFNLVGANVRQWYDEMPKYKHLRKLIKYNDSAAATSGGTG
AQKEKSRAIIESYMTKSSNICAVCGCKTSRTKNNICKDCTQNRDASIIHVRTQLARAEKR
VLDLQTVCRSCEGSSPGEEVACTSQDCAVYYSRRRQGAAFTWERENVRGVLGVLEGVGEL
EW
NT seq
4869 nt
NT seq
+upstream
nt +downstream
nt
atggcttttcgtatacgtttgaataatattgattcgtatcaagcctatccaacctctctt
gaccctacgttccctcatatccctgatgatgagcgtccgccgaagattccgatagtccgg
gtctttggagccactgagactggtcagaaagtatgtgcgcatattcatggggctttccca
tatctctatgttgaatatcctgggaaaagcttgatgccagaagacgaccgggctatgggg
ctatccgctggccgttctatccgatcacaagagaagccacctcgctttgttgctcatata
tcacttgtcaaaggtgtcccattctatggtttccatgttggatggaagttctattgcaag
atatacctattcaacccgcatatgaggggtcggcttgcgaggattctacagagcggaggt
gttttgagtagggttttccagccacatgaggctcacattcagtacataccgcaatttatg
attgatttcaatctaaatgggtgtggattcatcgagtgcgacaaggtcctcttcagaggg
gaaataccggatgcggatgaaataggggagcaacatatctggcataataagtcaataccg
gaggtatctattctgcccgagagccagttccagcggcaatcttattgtactttggaggtc
gatattcacgttcgggacatattcaatagaaagcaagtttcggcgcggccacttcatttc
gacttcgttgaacgcacaaatcctatatcgcctgatataaaactcgttcatagcatggca
gagctatggaaagatgagaatcggcgaagaggtaataatagtaaccccgcggagggtctg
gtatcttcatcctccgaccagcgtgggccttccggaacttggattcatgaggaagagtat
cgagagaggataaaagacataatcaagactgagaggcgggttagtgacggccgcactctc
aaattcgaaacttatgtatctcgcgcacaattcgaaaacctttggccaactgctttcgag
agtgtagcagaatcgtttgagggagcaggcctgcccccggacaagaaagttgagcttgtt
gtagaagctgaaattgctgaagttgacgagagtctcgtttacgatatcggtgagggagag
ttcagcgatagtgattttgaaggtctctttgatgtaatggatgatccagggggcgagcag
agcgctaaagttaaagctgagaagagtcatgaacaagtgaaaaggggcttggtatgggag
ctgcaggggcgcgagctaaagatatcatcgtcgccgccaatgccagaagcctcaaatggg
gagggccgagttgaaaagagcttgtctaacaattcacaattaactatcgcgggtggttca
ttctatgaaggactagttgaagaattcattgaagaggaagacgatatagtcgttactgat
agcagggtctggtttccgacaagctctgttgatccagatgtaccaacttcataccaagtt
ccttcaaaacgagtgaagatggagtccttttcttcaaatatcgaaagtcaaatgccaccg
tcttctgattgctctgacgtacctgaaaaaatctgttccacttctgcctcggttaggagg
gatatacctaacgggaagtctcctgcgctttccaacggccacccttcctccgcacagcct
gggtgccgctttgtagactcggtttcggaaaactcgaaaactcgagcttcaatatccgaa
ccgctgcaaaaaagccgcaaaagggctcagccctcttctagtagggccaatgatacgcct
aggccagagaagattggtcgtcgaggtaaagtagctgttgatttatctaatcttccaacc
cgactagacccaacctcctcactgcgcggtgccttcgacatcccctcgaatagctcaata
agatgttatagtcaacgcgctccatcatcatctgaactgctaacctccgaagacaaggaa
gaaatagctaaagtagcctatcaagaaccatactacagcgacgacagagacgtcccgaca
aaggtctgggaatatgccgggcgtgaattcaagttcaaatcaagcaagctgtcagatctt
cccatttttaaccccaacaatgaaaaccggattgtctgggaatacaacagactcaatcag
cgggatcctaggttcaagatgtggaatatagcggaggcacccccaagtaggaaggaagta
gcaaaattgctagaagagcgaaagatagtgaggaaggggaagggtgcgaggcagagtgtc
gcatatgaacacaatagcttttttgcgtctcagattcaaggtcccacgcagaaaaataaa
tatggtttcaagttttctcagaatgcaaagtcagataatgtgcagcatgagttacagcat
atgagtattatgagtttggagcttcatatcaacactgtgggagactttgttcctaatgcg
gagcgggaccagatcgagtgtattttctggtctctgaaggaaatggaagagggtgaggat
ggtgaggttaaggaagtaactcgcattggcattatcaccttagtcgatgaacacaataat
gatcccaaccctggcctgaaattccgccgccagtgcagggccgaaatccggaccgagacc
tcggaacttggcatgataaacacactaatcgatactgtgcgagtcctcgatccagatatt
ctcacaggatgggaggtcaactccagttcctggggctaccttatcaagcgtgccaatcaa
ctcttcgaaatgaacctctgcgacgacctctcccgggttaagatcgaaacgcatagtaga
ttcggaaaagaatccaatctctgggggttcaatactgggtctgccatcaggattaccgga
aggcacatggtaaacatatggcgagctatgaccgcggagcttaacttgttgggctattcc
atggaaaatgttgtatttcacttattgcaccagaggataccacattactcattcagagta
ttgactggatggtatactagtggatcaccgctattgtttgggaaggtcattaagcattta
gtgagaaaggtgcagttggatttggagatcctggaccggcaggagcttattacgcggacg
agcgagcaagcacgccttctgggcattgactttgcgtctgtctctggacgcggttcgcaa
tttaaggttgaatctatgatgttccgaatagcgaaaccggagtcgttcatactggtttcg
ccaagtaaggcacaggtcgggcaacaaaacgcacttgaatgcctacctctggtcatggaa
cctttctcgaggttctataccagtccagtggttgttctggatttccaatctttatatccg
tccgtgatgattgcgcacaactattgctattctacattcctagaactctgcgagaaggat
atcaatatcgccccaaacggaatgatgtacatcaaacaaaccatccgcaaatccctcctg
gcgaaaatgctgacggaaatccttgacacccgcgtgatggtgaagaacggcatgaagcgc
gacaagcacgacaaagccctccagaagctgctgaacagccgccaactcgcgctgaagctc
atcgcgaacgtgacatacgggtacacctcggcctcccactcgggccgcatgccgtgcacc
gagatcgccgatagcatcgtccagacagggcgcgagatcttggaaaaagccatccgcctg
atacaggacgatcccaattgggacgcagaagtagtctatggcgacacagacagcctcttc
atccacctggagggccgcacaaaagacgaagccttccggatcggggaagaaatcgcggcg
agagtgacggaggcaaacccccggcccatcaagctcaagttcgaaaaggtctacctcccg
tgcgtgctgttggcaaagaagcgctatgtggggttcaagtatgagtatcgcgagcaggcg
gagcccgacttcgacgcgaaggggatcgagacggtcaggagggatgggactcccgctgag
cagatgatcgaagaagctgcgctcaagattttgttcagaacaaaggacttgtcgcaggtt
aaggcttattgtcagagggagtggacgaagattatgagggagaaggctgtcaggttgggg
acttatgccgaaggagtatccctcccccctggcgcacaactagccgcaaagcgggtagaa
aaagatcccgaaaacgctcctcaatacgccgaacgtatcccctacgtagtaatagccggt
tcccccggtcaaaccctagcagaccgcacaatcgaagtcaacgacctcctagcgtcgcca
gaactaagcctagattcagaatactacatctgcaaaaacataatcccacccctggagcgc
atcttcaaccttgtcggcgcgaacgtgaggcaatggtacgacgagatgccaaagtacaag
catttaaggaagttgataaaatacaatgactctgctgccgccaccagtggaggaaccggc
gcccagaaggagaaatccagagccataatagaatcatacatgaccaagtcctcgaatatt
tgcgccgtatgcgggtgcaaaacttccagaaccaagaacaatatatgcaaagactgcact
caaaaccgtgacgcctccatcattcacgtgcgcacacaacttgcgcgcgctgagaagcgg
gtgctggacttgcagaccgtgtgtaggtcgtgcgagggcagctctccgggagaggaggtg
gcgtgcacgtcgcaggactgtgcggtctattattcgcgcaggaggcagggcgctgcgttc
acttgggagagggagaatgttagaggcgtgttgggcgttttggaaggggtgggggagttg
gagtggtaa
DBGET
integrated database retrieval system