Tuber melanosporum: GSTUM_00010634001
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Entry
GSTUM_00010634001 CDS
T01282
Name
(RefSeq) hypothetical protein
KO
K14792
rRNA biogenesis protein RRP5
Organism
tml
Tuber melanosporum
Brite
KEGG Orthology (KO) [BR:
tml00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tml03009
]
GSTUM_00010634001
Ribosome biogenesis [BR:
tml03009
]
Eukaryotic type
90S particles
Other 90S particles
GSTUM_00010634001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
S1_RRP5
S1
OB_RRP5_4th
Spt6_S1
HAT_Syf1_CNRKL1_N
HAT_PRP39_N
Suf
HAT_PRP39_C
HAT_Syf1_CNRKL1_C
TPR_19
OB_RRP5
TPR_15
NRDE-2
UTP6_C
TPR_CcmH_CycH
DUF7017
Motif
Other DBs
NCBI-GeneID:
9184304
NCBI-ProteinID:
XP_002841464
INRA:
GSTUM_00010634001
UniProt:
D5GMB2
LinkDB
All DBs
AA seq
1787 aa
AA seq
DB search
MGSEKKRKRPQDADPRRANKSETKKNPATANKRLKPEASTAASKFEPPKLSTFCSSKDEE
TSFPRGGGSVLTPLEFKQISNDAAKDVLFEAENAKAKSTKKKPMREELKKDKKSKRDESK
KGEQKGIKAEGLSYKRLVPGTLVLGCISQINQTDLALSLPNNLTGFVPLTSISESLNKRV
EALVRDSDDDEDEDVEEKIGTAKSESSEDDVDLKAMFQIGQYLRAYVVSSSELANSKSPS
GSKKIKKRIELSLDPVMANNGLTTTELVVGCTVQASVTSVEDHGLVMNLGIGNDLKGFLS
SKELGKGRSVTDAKEGQVMLCTTIGLSSNGKIVKLSGDLEQKPSKKGKYSGGKAAWWLSS
APTVDTFLPGTGVEVLITDIAKGSKAVGIVGKVMGLVDATMDFFHASGWREKDIESKFKV
GEKIKARVIATYAEPHKLALSILPHVLSFTRPIENEPTTILPTSTIINSAKILNIEPKTG
LSLDVGVPGVPGFVHISRVSSDSRIEVLSKDSGLHQTGSVHMARIIGYNSMDGLYLVSME
QKVLDQPFLRVEDIKIGEVVKGTINRVLDSGRVIVSLAEGITGIVDELHLSDIKLKHPEK
KFREGIEVKARVLLTDPSKRKVMLTLKKAIVNSDAPIISSYEDTSSGTRSVGTLVKILPS
GAVVKFFSDVCGFLPISEMSEAYIQDPHEHFTVGQSVNVHVLSVDPTNQKLRVSCRDPNL
FGEVHKVALAKLPPGDVVSGTVVEKSADDLIVEINGLGAEGIRGVLVIGQLTDGSREKSL
GVFKKLRAGQKLDGLLVLEKHEERRSITLSMKPSLVKAAKRGRMISKFEDVNEGERVKGW
VRNTTLHGLFVGFAGGIVGVVYKRDLPAEVQSLPNFGFVKNQSITGRVVYIDPSERRFRL
SLNSAKSEEKVSAVANTAGNSERLTVNPVDARFKLIDDYTPGKLTKAKVVSIQETQLNVK
LADNVQGRIDVSLVFETWDAIKDKKSPLALFKKGDVLDAKVIGIHDARNHRFLAITHQKS
NTKTPIFELSAKPSHIKEEGIEGCITKLEDITPNSTWVTFLNNISEECAWANIMPDIRGR
IRILDLSDNVAQLKTLQKSFPVGCALKCQVLRVDSEHSKLDLSARSPSSSALTFDKLAKG
MVVPGRVTKVTDRQVLVQISESVSGPISLTDLADDFSQANTNGYSKNEVIRVCIIDIDSP
NKRVTLSARPSRVMISDLPVKDPEIQAIVNVKVGDIRRGFVKQVSPKGLFVTIGGNVTAW
TKISDLSDGFLKEWEGLFTVGQLVKGKIMAVDSTLGHVQMSLRESDISGKEKPKPADYSS
LKEGQIVKGKVKNIAEYGVFISVDGSQNISGLCHKSQIADSAIDDISKLYATGDPVKAKI
ISIDLEKKRISFGLKSSYFKDEVSEDESEDGSESEGGADLSAVKVCLGLFWIDADGESDE
REQEQEEPSVEMNDAPTSEGLSTGGFDWSASILDKRGPDTDSEGDSNSEEEKHKKKKRKK
AQIKEDLTGNLATREPQSVADFERLLLGDPNDSKLWIMYMSFELQLSEVEKARGIAERAI
KTIALREESEKQNVWIAMLNMESMYGTDETLEEAFKRACQYNEAQGMHEKLASIYIQTSK
TEKADDLFKVMIKKFSQDPKIWVNYADFLLSSKQSCDAARALLQRAMQALPQSQHKDLIS
KFAKLEFRSGDPERGRTLFENLLATFKKKSDLYNMFLDMEIKYGSEEEDGKEGVRALFKR
ALAEKTSTRQAKALFKKWLEFEKSKGDKKSTETVTRKAKEYVEAKEE
NT seq
5364 nt
NT seq
+upstream
nt +downstream
nt
atgggctccgaaaagaagcgaaaacgccctcaagacgcggatccgcgccgagcgaataag
agcgaaacgaaaaaaaaccctgcaactgcaaataagaggctgaaacccgaggcatcgaca
gctgcttcaaaatttgagccaccaaagctatcaacattctgttcctcaaaggacgaagaa
acatctttcccaagaggtggtggctctgttcttactccgttggaattcaaacaaatatcc
aatgatgctgctaaagatgtccttttcgaagccgaaaatgcgaaggccaaatcgaccaaa
aagaagccgatgagagaagaattaaagaaagataaaaagagtaaaagggatgaatccaag
aaaggtgaacaaaagggaattaaagcagaaggattgagctataagagactagtaccggga
acacttgttcttggatgcatttctcaaatcaatcaaaccgacctcgccctttctttgcca
aataatctgactggctttgttcctctcacttctatttcggaatcgttgaacaagagggtt
gaagctttagtccgggatagcgatgacgacgaagatgaggacgtagaggaaaagatcgga
acagcaaaatcggaatctagtgaggacgatgttgacctcaaggctatgttccagatcggg
caatatctccgagcgtacgttgtgtcttcttcagaacttgccaattcgaaatctccttca
ggctccaagaaaattaagaagcggatcgagctatccttggatccggttatggccaataac
ggccttacaactactgaattagtcgttgggtgtactgttcaggcttctgtcacaagtgtg
gaggatcacggtctcgttatgaacttgggtatcgggaatgatctcaaagggtttctctca
tccaaggagctcgggaagggccgttcggtgacagatgcaaaggaaggccaagtgatgctt
tgcacaaccattgggctttcgtcaaatggtaaaattgtcaagctttcaggagatctagaa
cagaaaccaagcaagaagggcaaatactctggtggaaaggcagcctggtggctgagttct
gcgcctacagtcgatacatttttacccgggactggcgtggaggtactcatcaccgatata
gcaaagggtagtaaagccgttgggatcgtaggaaaagttatgggacttgtggatgctaca
atggacttctttcatgcttctggctggagggaaaaggatattgaatccaagtttaaggtt
ggagaaaagatcaaagcgcgtgtcattgctacttatgccgagcctcataaactcgctctt
tcaatcctcccccacgtcctttcatttactcggccaattgagaatgagcctacaactatc
ctcccaacatccaccattatcaactccgcaaagattcttaatatcgagcctaaaaccggc
ctctctcttgacgtcggcgttcctggtgttcccggtttcgtccatatatctcgggtctca
agcgacagcagaatagaagttctatctaaggattctggcctacatcagactggttcagtc
catatggctagaataattggttataactctatggatggcctctatcttgttagcatggag
cagaaggttctcgaccaaccatttttaagggtggaggatatcaaaatcggtgaagtcgtg
aagggaactatcaatcgagtcctagatagtggacgcgttatcgtaagcttagctgaaggg
atcaccggaatagtagatgagcttcatctaagcgatatcaaactcaagcatcctgaaaag
aagtttagagagggtattgaagtaaaagcaagggttttattaactgacccttcaaagagg
aaagtaatgttgaccttaaaaaaggctattgtgaactccgacgccccaataatatcatct
tacgaagatacaagttccggcactcgctcagttggtaccttggtcaaaatactacccagc
ggcgctgtagtcaagttcttttcagatgtctgtggcttcctccctatttccgaaatgagt
gaagcatatatccaggacccccatgagcacttcacggttggccaatctgtgaatgtccat
gtgttatcagtggatcctacaaaccaaaagttacgagtttcctgcagagatccaaaccta
tttggtgaagtccataaagtggctcttgccaaactacctcctggtgatgttgtctctggg
accgtagtcgaaaagtcagcggatgatcttattgttgagataaatggcttgggggctgaa
ggcatcagaggtgtgctagtgattggacaactaaccgatggtagccgtgagaagagctta
ggtgttttcaagaagctcagggctggacaaaaacttgatggcctcttggttttagagaaa
catgaggaaagaaggtcgattaccttgagtatgaagccaagcttagtcaaggcagcaaaa
cgcggaagaatgatcagcaaatttgaggatgtgaacgagggagaaagagtgaaaggctgg
gttaggaacactactcttcacggcctctttgttgggtttgccggtgggatagttggagtg
gtttacaaaagggaccttccagcagaagtccagtctctccccaatttcggattcgtcaag
aaccagtccatcaccggtagggtggtatatatagatccatcagagcgacgattccgatta
tcgctaaattccgctaaatcagaagagaaggtctcggccgtagctaacacagccggcaac
tcagagaggctcactgttaaccctgttgacgcgaggttcaaacttatcgacgactacacc
cccggaaaactcactaaagcaaaggtcgtttctatacaagagacgcagctaaacgtgaaa
ctcgccgacaacgtgcagggtaggattgacgtatcactagtgtttgaaacctgggatgct
atcaaggacaaaaagtctcccctcgcgttgtttaagaaaggggacgtcttggatgccaaa
gttattggaattcatgatgcgcgaaaccatcgcttccttgctatcacccaccaaaaatcg
aacaccaagactcctatctttgagctttcagccaagcccagccacataaaggaagagggt
attgaaggatgtattacaaagctagaagacattacccctaattcaacatgggtaacgttc
ttgaacaacatttcggaggagtgtgcctgggccaatatcatgcctgacatcaggggaaga
attcgcatcctggatctctcagacaatgtcgctcaactaaaaacactacaaaagagcttc
cctgttggctgcgccctcaaatgccaagttctccgagtcgactcagagcacagcaaactt
gatctttctgctcgtagcccttctagttcggctttgacgtttgacaagttggccaaggga
atggttgtccccgggagagtaactaaagtcactgatcggcaagtcttggtccaaatcagt
gaatcagtttctggaccgatcagccttaccgaccttgcagacgacttctcacaagcgaac
accaacgggtacagcaaaaatgaggtgattcgcgtttgtatcatagatattgattccccc
aacaagcgagttactctttcagctaggccttcccgtgtaatgatctcagatctaccagtc
aaggatcccgaaatccaagccattgtgaatgtcaaagtcggagatattagacgcggcttt
gtgaagcaagtctctcccaaagggctcttcgttactataggtggtaacgtcacagcctgg
accaagatttctgatctctcggatgggttcttgaaggaatgggaaggtttattcacggtt
ggtcagctcgtcaagggtaaaatcatggctgttgattccaccttgggtcacgtccagatg
agccttagagaatcggatatatccggaaaggaaaaaccgaagccagcagactactcctca
ctaaaggaagggcaaatcgtcaaggggaaagtgaagaatatcgcggaatatggtgttttt
atcagcgtggatggctctcaaaatatcagtggactatgtcataagagccaaatcgcggat
agtgccattgatgatattagcaagctctatgcgaccggagatcctgttaaggcaaagatt
ataagtattgatctggaaaagaaaagaatttcttttgggttgaagtcaagctacttcaag
gatgaagttagtgaggatgaaagcgaggacggtagtgaaagtgaaggtggtgctgacctc
agcgctgtaaaggtatgtttggggttattttggattgatgctgatggagaatctgacgag
agagagcaagagcaagaggagcctagtgtcgaaatgaacgatgcacctactagcgaaggt
ctcagcactggggggttcgactggtccgcaagtatcctagacaaacgcggtcctgacacc
gattctgagggggatagcaactccgaagaggaaaagcataaaaaaaagaagcgcaagaag
gcccaaatcaaagaagatttgacaggaaatctggcgacaagggaaccacaatccgtcgct
gacttcgaacggctcctccttggagaccctaacgattccaaactatggatcatgtacatg
tcattcgaactacagcttagcgaagtcgagaaagctagggggattgcggagagagcgatc
aagactatcgcccttcgggaggaaagtgaaaaacagaacgtctggatcgctatgctaaat
atggaatccatgtatggcaccgatgagactctcgaagaagccttcaagagagcttgccag
tataacgaggcgcagggcatgcacgagaaactagcaagtatctatattcaaactagcaag
actgagaaagcagatgaccttttcaaagtaatgatcaaaaaattcagccaagatcctaaa
atctgggtaaactacgccgactttctcctcagcagcaagcaaagctgcgatgctgcccgt
gcactccttcaacgcgcgatgcaagcactcccgcaaagccagcacaaagacctcatatct
aaatttgccaagttagaattccgcagcggtgatcccgagagaggacgaacactgtttgag
aacttgctcgccacctttaaaaagaagagcgatctatacaacatgttcttggatatggaa
attaagtacgggagtgaagaggaggacgggaaggaaggtgtcagagcattgttcaagagg
gctctcgctgagaagacttcgacccgtcaagccaaggctcttttcaagaagtggttggag
ttcgagaagagcaagggggataaaaagagcactgagactgtgacgaggaaggcgaaggaa
tacgtcgaggcgaaggaggagtga
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integrated database retrieval system
