KEGG   Tuber melanosporum: GSTUM_00010646001
Entry
GSTUM_00010646001 CDS       T01282                                 
Name
(RefSeq) hypothetical protein
  KO
K12860  pre-mRNA-splicing factor CDC5/CEF1
Organism
tml  Tuber melanosporum
Pathway
tml03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:tml00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    GSTUM_00010646001
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:tml03041]
    GSTUM_00010646001
   03400 DNA repair and recombination proteins [BR:tml03400]
    GSTUM_00010646001
Spliceosome [BR:tml03041]
 Complex B
  Other components
   Prp19 complex
    GSTUM_00010646001
 Complex C
   Prp19-CDC5 complex
    GSTUM_00010646001
DNA repair and recombination proteins [BR:tml03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   PSO4 complex
    GSTUM_00010646001
SSDB
Motif
Pfam: Myb_Cef Myb_DNA-binding Myb_DNA-bind_6 Rap1_C TPR_HPS5_insect Met_synt_B12 C45G9_C
Other DBs
NCBI-GeneID: 9183234
NCBI-ProteinID: XP_002841473
INRA: GSTUM_00010646001
UniProt: D5GMC1
LinkDB
AA seq 742 aa
MPVVKGGVWTNVEDEILKASVSKYGLNQWQRVSSLLARKSAKQCKARWAEWLDPSIRKVE
WSRDEDEKLLHLAKLMPTQWRTIAPIVGRTATQCLDRYQKLLDEAEARETARPDAVDMDE
DEKEMLSEARARLANTQGKKAKRKARERQLEDSRRLAVLQKRRELKHAGINIKLTNRRRG
EMDYNADIPFEKKPALGFYDISEEEARNERQRANIDPRKALSHTKRKGDQDEDLDRKRRK
GGDKDKNGAAAAFASAAKAGQLQKIRQAEQLSKRRQLVLPSPQVGETELEEIVKMGLMGE
DANKIAGASDNESTKGLVGSYTNINTGAPIRTPRAPPTEDRVANEIKNIRALTETQSSLL
GGENTPLHESGTTGFDGIAPRKMTVSTPNPLATPFRAGGVVDATPGATPGRPGQTPLRTP
RDSLAINQNGAYAGSLVSMTPRDQKLQQNSIKQQLRSGFASLPKPKEIELEEPEEPEEDT
DTPAGSQPVEDREEIDRRNRERAEAEATAELKRRTQVIQKSLPRPRIVDIGALLEAGMSN
ERNSIQKMISQEMATLIGTDALRYPVKGGKVTGAPKPLEKLDDDLLEKARMEIVLELSPE
IVERAKPGVEGAWLRIHSSPNLPGLEDYRAGDEDNQIKTYDFIQEKLTKDATQGNKLEKK
LSLHLGGYQARSKMLCQKLIEASEAIAETRRDLEGFRTLKISEAAALPKRLEGLRKEVAF
LDKREREAQEVYRTRKEELESL
NT seq 2229 nt   +upstreamnt  +downstreamnt
atgccggtcgtaaagggcggtgtctggaccaacgtcgaggacgaaattcttaaagcttcg
gtttctaagtacggactcaaccagtggcaacgcgtctcttcgctccttgcccgaaaatcg
gcgaaacaatgcaaagctcgttgggcggaatggctggaccccagtattagaaaagttgaa
tggtctcgcgatgaagatgaaaaactccttcatttggccaagttaatgcccacacagtgg
aggacaattgcgcccattgttggaagaaccgccacgcagtgcctagatcgataccagaag
ctcctcgatgaggccgaagctcgagagaccgctaggcctgatgcggttgacatggatgag
gatgaaaaggagatgctaagcgaagctcgtgcccgtctcgcgaatactcaaggaaagaag
gctaagcgcaaggctcgtgaacggcaactcgaagactctaggcgattagccgtacttcag
aaacgccgggaactcaaacatgcgggtatcaatattaaattaaccaaccggcgcagaggc
gaaatggattataacgcggatattccatttgagaagaaaccagcattgggattttacgat
attagtgaggaagaggctcggaatgagaggcagcgtgccaacatcgatccccggaaggct
ttgtcccataccaagcggaaaggagatcaagacgaggatctagatagaaagaggagaaaa
ggtggggataaagacaagaacggtgctgctgctgctttcgcatccgcagcaaaggctgga
caattacaaaagattcgacaagccgagcaattgagtaagagaaggcaacttgtccttcct
tcgccacaagttggggagacagaattggaggaaattgttaaaatgggtttgatgggtgaa
gatgcgaataaaattgctggagccagcgataacgagtcgactaaagggctggttggcagc
tatactaatattaatactggcgcacctattcgcactccgagggctcccccgaccgaagac
cgtgtagcgaacgaaatcaaaaatatccgtgcgcttactgaaacccagtcttcacttctt
ggaggggagaataccccattgcatgaatcgggtaccactggttttgacggcattgccccc
cggaagatgaccgtgtcaacaccgaatcctttagcgacaccattccgtgctggtggggtc
gtagacgctacacctggtgctaccccaggtagacctggacaaacacctttaaggactcca
agagattctttagcaatcaatcagaatggggcatatgccggttctcttgtttccatgact
cctagggaccaaaagctgcaacagaactcgatcaagcagcagttgagatctggttttgcg
tcgctccctaagcctaaggagatagaattagaagaaccagaggagccagaagaagatacg
gacaccccggcggggtcacaacccgtagaggacagagaagaaatagaccgccggaaccgt
gaacgcgctgaggctgaggctacggcagaactgaaacgcagaacacaggtcatacagaag
tcactcccgcgcccaaggattgttgacatcggagcacttctagaggccgggatgtcaaac
gaacggaattctatacaaaaaatgatttcccaagaaatggccaccctgattgggacagat
gccctacgatacccagttaagggcggaaaggtcacaggcgctccaaaacccctcgagaaa
ttggatgatgatctcctcgagaaggcgagaatggagattgttttggagttgtcgccggaa
attgtcgagcgggctaaaccgggggttgagggtgcttggctgaggattcattcatctcct
aatcttccaggactcgaagattaccgagcaggtgacgaagacaaccagattaaaacctat
gacttcatccaagaaaagctcaccaaagatgccactcagggcaacaaactagagaagaaa
ctcagcctccacctcggcggctaccaagcccgttccaaaatgttgtgccaaaagttaatc
gaagcatctgaagcaatcgcggaaacaagaagggacctggagggcttcagaaccctgaaa
attagcgaagcagccgccctcccgaaaaggcttgaagggcttaggaaggaagttgccttc
ttggacaagagggaaagggaagcccaagaagtctatagaactagaaaagaagagttggag
agtctgtaa

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