Tuber melanosporum: GSTUM_00010670001
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Entry
GSTUM_00010670001 CDS
T01282
Name
(RefSeq) hypothetical protein
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
tml
Tuber melanosporum
Pathway
tml03022
Basal transcription factors
tml03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
tml00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
GSTUM_00010670001
09124 Replication and repair
03420 Nucleotide excision repair
GSTUM_00010670001
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tml03021
]
GSTUM_00010670001
03036 Chromosome and associated proteins [BR:
tml03036
]
GSTUM_00010670001
03400 DNA repair and recombination proteins [BR:
tml03400
]
GSTUM_00010670001
Enzymes [BR:
tml01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
GSTUM_00010670001
Transcription machinery [BR:
tml03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
GSTUM_00010670001
Chromosome and associated proteins [BR:
tml03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
GSTUM_00010670001
DNA repair and recombination proteins [BR:
tml03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
GSTUM_00010670001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HBB
DEAD_2
Helicase_C_2
ResIII
DEAD
nSTAND3
SLFN-g3_helicase
Motif
Other DBs
NCBI-GeneID:
9183256
NCBI-ProteinID:
XP_002841495
INRA:
GSTUM_00010670001
UniProt:
D5GME3
LinkDB
All DBs
AA seq
748 aa
AA seq
DB search
MFAKSFKRVSRPKPHVEAQSFKRKKKKRPTSPLHRAAPPQLAMRFKIDELEVLFPYPRIY
PGEWRYMTDLKRTLDAGGHCVLEMPSGTGKTVSLLSLIVAYQQSFPEPRKLIYCSRTMSE
IEKALAELKALMAYRSKELGYVEEFRGSLTAGFVKEKKARGEEVEVCVFHDNLDTLEPHN
LITPGVYTLDGMLKYGEKHTQCPYFTARRMMPFCNVIIYSYHYLLDPKIAERVSKELSKD
CIVVFDEAHNIDNVCIESLSIDLTDDSLRRAARGAQNLEKKINEMKASDAEKLQNEYKKL
VEGLRDVDEGTEEDSFMANPVLPKDLLKEAIPGNIRRAEHFLAFLKRFVEYLKTRMKVLH
VISETPASFLQHLKDLTFIEKKPLRFCAERLTSLVRTLELANIEDYKSLQEVAMFATLVA
TYEKGFLLILEPFESETATVPNPILHFTCLDASIAIRPVFERFSSVVITSGTISPLEMYP
KMLQFNTVVQESYSMTLARRSFLPMIVTRGSDQVAVSTRFEIRNDPSVVRNYGSLLVEFS
KITPDGMVVFFPSYLYMESIISMWQGMGILDEVWKYKLILVETPDSQETSLALETYRTAC
CNGRGAISTTISVELCFESPSNTPKNDFLSFDAMRHAAQCLGRVLRGKDDYGIMVLADRR
FGKKRSQLPKWINQALLESDVNLSTDMAVAIAKKFLRTMAQPFAPKDQEGISTWSLADLE
EHQGKGSELQDVGEEEGEEDVVMANAVA
NT seq
2247 nt
NT seq
+upstream
nt +downstream
nt
atgttcgcgaaatcgttcaaacgcgtctcccgcccaaaaccacacgtggaggctcaatcg
ttcaagcgaaaaaaaaaaaaacgccccacctcccccctccaccgtgccgccccaccacag
ctcgctatgaggttcaagatcgatgaactggaagtgctcttcccttatccaaggatttac
cctggtgagtggcgctacatgacagatctcaagagaaccctagacgccggtggccactgc
gtcctcgagatgccttcaggaaccggtaaaactgtctccctgctctcactaatcgtagcc
tatcaacagtcgttccccgaacccaggaagctaatttactgctcccgcaccatgtccgag
atcgagaaggccctggcagagttgaaggcgctcatggcgtaccggagtaaggagcttgga
tacgtggaggagttccgggggagtctaacggcagggttcgtcaaggagaagaaggcgagg
ggggaggaagttgaagtttgcgtattccatgataatctggacactctcgaaccgcacaac
ttgattacgcctggggtttatacgcttgatgggatgttgaagtatggggagaagcatacg
cagtgtccctactttaccgcccgaagaatgatgccgttttgcaatgtcataatctactca
taccattatctgttggatcccaagatcgctgagagggtttccaaggagctttctaaggat
tgtatagttgtctttgacgaggcgcataatattgataacgtatgcatcgagtctcttagc
attgacttgacagatgactcgctccgtcgagcagctagaggtgcgcagaatcttgagaaa
aagatcaacgagatgaaggcatcagacgcggagaaactgcaaaacgagtataagaaactt
gtcgaaggcttgcgggacgttgatgagggaactgaagaagattcttttatggctaatcca
gtattgcctaaggatctgttaaaggaggcgatacccgggaatatcaggagagctgagcat
ttcctggcgtttttgaaacggtttgttgagtacctgaagacaagaatgaaagtgttacat
gtcatttcggaaacgcccgcttcatttcttcagcacttgaaggacttgacttttattgag
aagaagccgttgaggttctgcgccgaacgtttaacctcacttgtccgaaccttagagtta
gcaaacattgaggactacaagtcgctgcaagaagtcgctatgtttgcaactttggttgcg
acatatgagaagggatttttgctaattcttgagccttttgagtctgagacagctactgtg
ccgaaccctattctccactttacctgtttagatgcttctattgccatcaggccggttttc
gagaggttctcttcagttgtcatcacttcaggaactatctctccgctagagatgtatccc
aagatgttacagttcaacacagttgtgcaagagtcgtattccatgacacttgcgcgaaga
agtttcttgccaatgattgtaactaggggcagtgaccaagtggctgttagtacacgcttc
gagatcagaaatgaccctagtgtcgtccgaaattacgggagtcttttggtcgagttctcc
aagattacgcctgatgggatggttgtgttctttcctagttacctatacatggagagcatt
atcagtatgtggcaaggaatgggaatcctagacgaagtctggaaatataagttgatcctg
gtagaaacacccgatagtcaagaaaccagtctagcactagaaacctaccgaaccgcttgc
tgtaacggcagaggcgcgatttcgaccaccatttcggtcgaactgtgctttgagtcccct
tccaatacacccaagaatgacttcctttctttcgacgccatgcgccatgcagcgcaatgt
ctcggtcgtgtcctccgtggaaaggatgattacggaataatggtactcgctgaccgccgg
ttcgggaagaagcggagtcaattgcccaagtggatcaaccaagccctgttagagtcggac
gtcaacttgtcgacggatatggcggttgccatcgcaaagaagtttctaaggaccatggcg
cagccgttcgctccgaaagatcaggagggtatatcaacatggagtttggcggatttggag
gagcaccagggaaaggggagcgagttgcaggatgtcggggaggaggagggagaggaggat
gtagttatggcgaatgcggtggcctga
DBGET
integrated database retrieval system
