Tuber melanosporum: GSTUM_00010685001
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Entry
GSTUM_00010685001 CDS
T01282
Name
(RefSeq) hypothetical protein
KO
K12590
exosome complex component RRP46
Organism
tml
Tuber melanosporum
Pathway
tml03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tml00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
GSTUM_00010685001
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tml03019
]
GSTUM_00010685001
Messenger RNA biogenesis [BR:
tml03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
GSTUM_00010685001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
Motif
Other DBs
NCBI-GeneID:
9182126
NCBI-ProteinID:
XP_002841509
INRA:
GSTUM_00010685001
UniProt:
D5GMF7
LinkDB
All DBs
AA seq
204 aa
AA seq
DB search
MADGSAQYTDGPTTLLASINGPIEVKPRDEIPLEAYLEITIRPSAGVTSVREKHLEALLR
SAISPLIIRTAYPRTLLQITLQVIQHEQASMAYALHTLLTSAIVVVMLALVDAGVPMRGM
LAAAFVEEGDGSAAHVFGYAITGGGGGWGGIKEGLVFVESDGVFDEKGFVAASEVGRKKC
LEVGELMKDWVREKVGKDMKYRLK
NT seq
615 nt
NT seq
+upstream
nt +downstream
nt
atggccgacggttccgcgcaatacacggacggcccaacaaccctcctagcatcaatcaac
ggcccgatagaggtaaagcccagagacgaaatcccgctagaagcttacctagagataaca
attaggccctccgccggagttacctctgttcgcgaaaaacacctagaagccctccttcgc
tccgccatatccccactcataatacgtactgcctacccccgcacgcttttgcaaatcacc
ttacaggttatccagcatgagcaggcgtccatggcgtacgcattacatactttgttgact
tcggctatagtggttgtcatgctcgcgctcgtcgatgcgggggtcccgatgagggggatg
ctggctgcggccttcgtggaggagggtgatgggagtgcggcgcatgttttcgggtatgcg
attacgggcggtggcggaggatggggaggtattaaggagggattggtatttgtggagagt
gatggggtatttgacgagaagggattcgtggcggcctcggaggtggggaggaagaagtgt
ctggaggtcggagaattgatgaaggactgggtcagggagaaagtcggaaaggacatgaaa
taccgcttaaagtaa
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