KEGG   Tuber melanosporum: GSTUM_00010689001
Entry
GSTUM_00010689001 CDS       T01282                                 
Name
(RefSeq) hypothetical protein
  KO
K14298  mRNA export factor
Organism
tml  Tuber melanosporum
Pathway
tml03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:tml00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    GSTUM_00010689001
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:tml03019]
    GSTUM_00010689001
   03036 Chromosome and associated proteins [BR:tml03036]
    GSTUM_00010689001
Messenger RNA biogenesis [BR:tml03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     GSTUM_00010689001
Chromosome and associated proteins [BR:tml03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    GSTUM_00010689001
SSDB
Motif
Pfam: WD40 Beta-prop_EML_2 WD40_CDC20-Fz WDR55 WD40_WDHD1_1st WD40_Prp19 EIF3I Beta-prop_TEP1_2nd Beta-prop_RIG_2nd ANAPC4_WD40 Beta-prop_CAF1B_HIR1 WD40_MABP1-WDR62_2nd Beta-prop_TEP1_C Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_1st WD40_RFWD3 WDR90_beta-prop_4th Beta-prop_EML Beta-prop_IFT122_1st Beta-prop_EIPR1 Beta-prop_NUP159_NUP214 Beta-prop_HPS5 WD40_like Beta-prop_WDR11_2nd NBCH_WD40 Beta-prop_IFT122_2nd Beta-prop_SCAP Beta-prop_WDR19_1st Beta-prop_Vps41 Pep3_Vps18
Other DBs
NCBI-GeneID: 9182129
NCBI-ProteinID: XP_002841512
INRA: GSTUM_00010689001
UniProt: D5GMG0
LinkDB
AA seq 361 aa
MSYFTNSSGSASTGSATTSSSLGDISADITLSSPPEDSISDLEFSTKSDLLAVASWDKRV
RIYDVSQTGANSGKAIYAHEGPVLSVAWSIDGDKLVSGGTDNAARLWDVATGQSTQVAAH
DDPIRSVRWFTPPGANAQMVVTGSWDKTIKYWDLRQQQPVCLVKLPERVYTMDVSRDLLV
VGTAEKHLQIINLKNPETVFESRISPLKWQTRVVACFPDASGFAVGGIEGRCAFVYLDPK
NTKLDFSFKCHRTARTRGAGADVYGVNAISFHPVHGTFSTAGADGTFHYWDKDSRSRTKG
FPPVGGIISATGFNRNGSIFAYAVSYDWSKGHQHNTPTYPNKIMLHRVGDEEAKRKVTSK
Y
NT seq 1086 nt   +upstreamnt  +downstreamnt
atgtcttactttacaaatagttccgggtctgcttccaccggatccgctaccacctccagt
agtctgggagatattagtgccgatataacgctgtcctcacccccggaagacagtatctct
gacctagagttctccacgaagtcagaccttttggcagtcgctagttgggacaagagagtt
cgcatttatgatgtttctcagaccggggcgaactccggtaaagcgatttacgcacatgaa
gggcccgttctcagtgtggcttggtcaatagatggtgataaactcgtctcaggaggtacc
gataacgctgcaagactgtgggatgttgctacaggtcaaagcactcaggtcgccgcccat
gatgatccaatccgctctgttcgttggtttactccgccaggagctaacgcccaaatggtg
gtcacaggatcatgggataaaacaatcaagtactgggacctaaggcagcagcaacctgtt
tgtttggtgaaattgcccgagcgggtttatacgatggatgtttctcgggacttactggtc
gtagggactgcagagaagcatctccaaatcatcaacctgaaaaatccggaaaccgttttc
gaatcaaggattagtccgctcaagtggcagacccgcgtagttgcctgtttcccagatgcg
tcgggcttcgcagtcggtggtatcgaggggaggtgcgcttttgtctatcttgaccccaaa
aataccaagttggatttctcgtttaaatgccatagaacagctagaactagaggcgccggc
gctgatgtttatggagtgaatgctatctcctttcatcctgtgcatggaactttctccact
gctggcgctgatggaaccttccactattgggacaaagattccagaagcagaaccaaaggg
tttcctcctgtcggtggaataatctccgccaccggcttcaatagaaatggctcgatcttc
gcctacgcggttagctacgactggagcaaaggccaccaacacaacactccaacatacccg
aataagataatgctgcatagggtgggcgatgaggaagcaaagcgaaaggttacctcgaaa
tactaa

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