Tuber melanosporum: GSTUM_00010952001
Help
Entry
GSTUM_00010952001 CDS
T01282
Name
(RefSeq) hypothetical protein
KO
K12615
enhancer of mRNA-decapping protein 3
Organism
tml
Tuber melanosporum
Pathway
tml03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tml00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
GSTUM_00010952001
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tml03019
]
GSTUM_00010952001
Messenger RNA biogenesis [BR:
tml03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
GSTUM_00010952001
mRNA degradation factors
5'-3' decay
Decapping complex
GSTUM_00010952001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
YjeF_N
FDF
Zf-C2H2_ZNF451
Motif
Other DBs
NCBI-GeneID:
9183416
NCBI-ProteinID:
XP_002841657
INRA:
GSTUM_00010952001
UniProt:
D5GMV5
LinkDB
All DBs
AA seq
840 aa
AA seq
DB search
MTSQFIGLQVLLSLNDPARTRVRGLVADVNGPELTLRDVLFVDTGYRTPGYTVNGLDIED
IDIIPSETNGSTPPIPPQPPHPPHFQAPPALSTIQPPPPPAQVQAYSQPLSQLSSNQFSR
PATAVHSPQIPATSGQFIDPAIISISQKPEANTIPTAQASVPNVKHKPKKPSYSTPPRMG
TAGSSILSAAAAIRPPNPPPLKRNGSSQGVPVAPINTLTAPTSSAPYPLSASAAPDPSRP
IGLGHSLPVRGPVSASVLQMPFGDLSLREDVAAESSAFDETDDAASNVAMPPTPYTRPPF
PRRRSRRRKAQTRNNQQRPLLESTTQEDLTQKDTVSHGILGGPIPQATSSGGTGLLQPGA
INSDKRRRQRRRDRRNDGNSNAEEEGWATEDVNDYKAREFDFQGNLDRFDKEGLFNQMKA
EDTTADEARLVSFNRLPQRGSNSKASGVPRKNYHHHENVLGTYANGQPLNDRDGWPNEFI
TEESSEDSEDELGRGRGDGAAADSGRSSRRGMSRRSQSGRRRGARQMSTSNPSMRSLENI
HHQPSNGGGLGQTPTNKPGKPTLRLAPSGKLCPIVSPLQMLDVERIAEVELCLTDDMMTE
NAGRAIAQVVIQAFGKRISASNHNALPVVLVFAGNHKSGARAIAAGRHLKNHHVRVMACV
LGLEREDGLLEHVRRQLNVFRNAGGRVARWEELANNLKTLDSPPELIVDGLLGIHLNFED
LRTDQQATAFELVQFANKSKASVLAVDIPSGVDGSTGEVAQLEGTGRLHMRAKWVVCMGA
PKSGLLNALVSGVGASWNLYVADIGISNTAWRKYGTRRRHGVEFAAEWVVELEYHGAPSA
NT seq
2523 nt
NT seq
+upstream
nt +downstream
nt
atgacatcccaatttattggtcttcaggttctcttgagtctcaacgaccctgctcgtact
cgagtccgtggactcgttgccgacgtcaatggacctgaactgacacttcgcgacgtgctt
tttgtggatactggctataggactcctggctatacagttaacggcttagatatcgaggac
attgatatcatcccctccgagaccaatggctctacccctcctatccctccccaaccgcct
cacccacctcacttccaggcccctcctgctctatccactatccaacctccaccacctccg
gcacaggttcaagcgtactcccaacccctctcccaactatcaagcaatcagttttcccga
ccagcgacagccgtgcattctccacagataccagctacctcgggtcagtttattgatccg
gccattatatcaatatcgcagaagccagaggccaacactataccaaccgctcaggcctct
gtgccaaatgttaaacacaagccgaagaaaccgagttactctaccccaccaagaatgggg
actgctggctcgtccattctctcagctgccgccgctataagacccccgaacccaccacca
ttaaagcgcaacggctcgtcgcaaggggtccccgtagctcctatcaacacccttacggcc
ccaacaagctcggcgccttatcctctttcagctagcgctgctccagatccctcaagaccc
attggactcggccattccctaccagtacggggtcctgtttcggcatctgtgctccaaatg
ccttttggtgatctctcccttcgagaggacgtcgctgctgaatcaagtgctttcgatgaa
accgacgatgctgctagcaatgtagcgatgccacccactccttatactcggccgcctttt
cctagaagacgctctcgtcgtagaaaagctcaaacaaggaacaatcagcaacgcccactc
ctcgaatcaactacccaggaggacctcacccagaaggacaccgtgtcacatgggattttg
gggggtccaataccccaagcaactagttctggcggtactggtttgcttcagccaggtgct
ataaattctgacaagagaaggcggcaaagacggagagatcggcggaatgatggcaattca
aatgcagaagaggaaggttgggccacagaagatgtcaatgactacaaagctagggaattt
gattttcaggggaacttggaccgatttgataaagagggtttattcaaccagatgaaggct
gaagacacgacagcggacgaggcacgtctggtatccttcaacaggcttccacaacgcggc
tccaatagcaaggcatcaggtgtccctcgaaagaattaccatcaccacgagaatgtcctt
ggcacctacgcaaacgggcagccgttgaatgatcgggatggctggccgaacgaatttatc
acagaagagtcatctgaggactccgaggatgagctcggccgaggtcgtggagatggcgcg
gctgcagatagtggaagaagtagcagaaggggcatgtctcgtcgatcacagagtggtcgt
cgccgaggcgcaagacaaatgagcacaagtaatccatcgatgagatccctagagaatatt
catcatcagccatcaaatggtggaggccttggacaaactccaactaacaagcccggaaaa
ccaacgttacggctagcgcccagtggcaaactttgccccatcgtcagcccactgcaaatg
ttagatgtggagagaattgcggaggtcgagctttgcctcacagacgatatgatgacagaa
aatgctggtcgggctattgcgcaggtagtcattcaggcctttggaaaacggatatctgca
tcaaaccataatgccctcccggtagtccttgtctttgccggaaatcataaaagcggggca
cgtgcgatagctgcgggaaggcacttgaagaatcatcatgttcgggtgatggcttgtgtt
ctaggtttggaacgtgaagatgggttgctagagcatgtcaggaggcagctcaatgttttc
agaaacgctggcggcagggtagcacggtgggaagagcttgcgaacaatttgaaaaccctc
gattcaccgccggagctgatagttgatggcttgctgggcattcatcttaactttgaagat
ctacgaacagatcagcaggctactgcatttgagttggtgcagtttgcaaataagagcaaa
gcaagcgtattagcagttgatatacccagtggtgtggacgggagcaccggcgaagttgca
cagcttgaaggtacaggtcgcctacatatgagagcaaaatgggtggtctgtatgggcgca
ccaaaatctggtctgctcaatgcgctcgtttctggtgtaggtgctagctggaacctttat
gttgctgatatcggcatttccaatactgcctggaggaagtatggaactcgtcggcgacac
ggcgtcgaattcgctgccgaatgggtcgtcgaattggagtatcacggcgcaccttccgct
tag
DBGET
integrated database retrieval system