Tuber melanosporum: GSTUM_00011011001
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Entry
GSTUM_00011011001 CDS
T01282
Name
(RefSeq) hypothetical protein
KO
K12236
transcriptional repressor NF-X1
Organism
tml
Tuber melanosporum
Brite
KEGG Orthology (KO) [BR:
tml00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tml03000
]
GSTUM_00011011001
04121 Ubiquitin system [BR:
tml04121
]
GSTUM_00011011001
Transcription factors [BR:
tml03000
]
Eukaryotic type
Zinc finger
Other zinc fingers
GSTUM_00011011001
Ubiquitin system [BR:
tml04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
NFX1 proteins
GSTUM_00011011001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
R3H
zf-NF-X1
Motif
Other DBs
NCBI-GeneID:
9183455
NCBI-ProteinID:
XP_002841696
INRA:
GSTUM_00011011001
UniProt:
D5GN12
LinkDB
All DBs
AA seq
1332 aa
AA seq
DB search
MVTVEPTPSQPPSHSSAPSRGTARQRAGRVPFLGIGRSQQQQPPETPAPAEPRPQSHTGQ
PTIAGYRRRRYGKGRGGGSGSSFGSGYSSNRDIQELVNHENGVETDKRSQASGSTNEELH
FDMASVAPSTCDGSGPIGTPSTIHGVDEPNGAPLSVHSSTAASSSSHNTVRKGKGKERAV
SETNSTTDDGSVSHKTSSRKSNKPRGRRLSPHKPFGGHLSSTANSENSASTSSNTSIVGS
PDENRPTPKLSRVPPQREFGGQLTTGEDSVLNGKLRAEATAYQPGESTDQYLPPHLRGVS
HNIDSRDLYSDWGPPTTLYDSTTASVRSKSTVPTGGRGRGRGSRRGPQIPHIPLADGKPS
PRIINMRPHTNEHKGPENISTRIHREITSGSYECLVCFSNLTRRAKVWNCKCCWAVFHLD
CVKKWAKQGLEQTPAGPVGAEFSPTWRCPACNNHEKIVPTTYSCWCEKEVQPESTNFLPP
HSCGQTCGKKRGLPKDCPHACDLQCHAGPCPPCPAMGPRQPCHCGRDEVQKRCIDTVYEG
GWSCGHACGDSLPCGKHSCPKPCHPGVCGDCQIPEMLKCFCGNNTKGIKCSDKQEPVEST
ISDIHGVESWLGYWNCHSPCNRYFDCGKHTCQKPCHPQDALPARCPRSPDLVTHCPCGRT
KISEILESPRASCEADVPSCGKACGKILRCGHECDKTCHEGECPVCVRIVDIRCVCGKTI
LETLCHQGEPGESPRCMRVCKTLLNCGRHECAERCCSGEWGAHDRLNSRRKMKSYNPGQS
SSDGFESEHICTRPCGRPLKCGTHSCQMLCHRGPCGTCLEASFDELSCNCGRTVLPPPVA
CGATPPKCEFPCTRDTDCGHPKVPHSCHADEVKCPNCPYLVEKACLCGKKGIKNVPCFKN
TVSCGTECGKKLSCGSHNCQKVCHASGGCDESCKQQCGKAKSCGHPCLEACHAPFQCPEV
KPCSTTIQFTCACGGLKQEARCCSTKTNPTGNKRELKCNDQCRSRRMALAFELDPDRESI
PPYSEGTLFHYAKDRKWSAAVEEKFRAFAESNQKRYTFNPMKSGQRAFLHSLAEDYGFQS
VSQDPEPYRSVILFKGSNNGTAPKKTIAEYIASKPSAVPTSTPVSIQQLKKPQRQPYNAI
ILQNIRIGLLNAEIERELEPVLKDTQLRFNLQWSGGDDVLLVPKASSFGNDQIDVELADA
LIPQLKRLIAKNGLADKAELCLVGKDGQIVNRESQPKWSLVVGKSSPAAGTKPPAQANVG
SKSRFDLEHGKAELARKSAESLKKKEKKKGKEVDVVDDWETAADNEAEAAGGGLASSVSM
EANMGDEVEGQV
NT seq
3999 nt
NT seq
+upstream
nt +downstream
nt
atggttaccgtcgagccaactccctcacaaccgccaagtcatagttctgcaccgtcaaga
ggcactgctcgtcagcgtgccggtagagttccttttctcggtattggaagaagtcagcag
caacaaccacccgaaactcccgcacctgccgagccccgaccacaatctcacacaggacaa
cccacaatagcaggttatcgcaggaggagatatgggaagggtagaggtggtggtagtggt
agtagtttcggtagcgggtactcgtcaaacagagatatccaggaactggttaatcatgag
aatggcgtggagactgataagagatctcaggcatcgggctctacaaatgaggaattacac
ttcgatatggcttcggtggcgcccagcacatgcgatggtagtggacccatcggaactcct
agtactatacacggggtagacgaacctaatggagccccattatctgtccacagttctact
gctgctagctcctcttcacataataccgtccggaaagggaaggggaaggagagggctgtc
agtgagacaaatagtactactgatgatggctcggtgtcccataagacttcgtctcgcaag
agcaataagcccaggggccgacgtttgtctccacacaagccgtttggggggcatctatct
tccactgcgaactctgagaattctgcctctacatcatccaatacctctattgttggctca
cctgatgaaaaccgtccaaccccgaaactctctcgtgtgccaccgcagagagaattcgga
gggcaattgacaacaggggaggactccgttcttaacgggaaacttcgtgcggaggcaacg
gcctatcaacccggggagtcgacagatcagtaccttccgccacatcttcgcggcgtctcc
cataatatagacagcagagatctttattctgattggggacccccaacaacattatatgat
tccacgactgcaagtgttagatctaaaagcactgtgcctactggtggacgcgggcgtgga
aggggtagtcgccgcggaccgcaaatcccgcatattccattggctgatggtaagccatct
cctagaatcataaacatgagacctcataccaacgaacacaaaggtcctgagaacattagc
accagaattcatagggaaattacgagtggatcctatgaatgtctagtgtgctttagtaat
ttaactagaagggcaaaggtctggaattgtaagtgctgttgggcagtattccacttggat
tgtgtcaaaaaatgggcaaaacaaggtctggagcagacaccggccggaccagttggtgcc
gaattttcaccgacatggagatgcccggcttgcaacaatcatgagaaaatagtaccaact
acctattcttgttggtgtgagaaagaagtccaaccagagtctaccaattttctcccccct
catagctgcggccaaacgtgcggaaagaagcggggtttgcccaaggactgtccccatgct
tgcgatcttcaatgtcatgctggaccgtgccccccttgtcctgcgatgggacctagacaa
ccttgccattgcggcagagatgaagtacagaagcgctgtattgacacagtttatgaaggt
ggttggagctgtgggcacgcctgtggggacagtttgccatgtggcaagcattcctgtcca
aaaccatgccaccctggggtctgtggcgattgccaaataccggagatgcttaagtgcttc
tgtggaaataacaccaaaggaatcaagtgcagtgacaaacaggagccggtcgagagtacg
atcagcgatattcatggtgtcgaaagttggttgggttactggaactgccactcaccatgc
aataggtattttgactgcggtaaacatacttgtcagaagccttgccatcctcaagatgcg
ctccccgcccgctgccctcgctcgccagaccttgtcactcattgcccatgtggtaggacc
aagataagtgaaattcttgaatcgcctagagccagttgcgaggcagacgtcccatcatgt
ggcaaggcttgtggcaagattcttaggtgtggccatgaatgtgacaaaacctgccacgaa
ggcgaatgccctgtttgtgtgaggatagttgatatcagatgcgtctgtggcaagaccatt
ttagagaccctatgccatcaaggagaaccaggcgagtcccctcggtgtatgagggtctgc
aaaacgctcttgaattgtggcagacatgagtgtgcagagcggtgttgctctggagaatgg
ggggctcatgaccggctgaattcaaggaggaagatgaagtcatataacccaggccagtct
agcagtgatggattcgaatcagaacatatctgcacacgaccgtgcggtcggccattgaag
tgcggaacccacagctgccagatgctttgccatcgtgggccgtgtggcacatgcttggaa
gctagctttgatgagctgagctgtaattgcggaagaacagtcttaccacctccggttgct
tgcggtgcaacgccgcctaagtgcgaatttccgtgcactcgagatacagattgtggtcac
cctaaggttcctcattcgtgccatgcggatgaagttaaatgcccgaattgtccctacctt
gtggagaaggcatgtctctgcggtaagaaagggatcaagaacgttccttgctttaagaat
accgtttcttgcggaactgaatgcggcaagaagctttcctgtggttcccacaattgccag
aaggtctgccacgccagcgggggctgcgatgagtcttgcaagcaacagtgtggaaaggcc
aaatcttgtggacatccctgcttagaagcttgccacgcaccattccagtgcccggaggtc
aagccatgctctaccacgattcagttcacttgcgcttgtggggggttgaagcaagaagcc
agatgctgttctacaaagactaaccctactgggaataagagagagctgaaatgcaatgat
caatgccgcagtcgacgtatggcactcgctttcgaactcgacccggatcgcgaatctatt
cctccttactccgaaggaactctctttcactatgccaaagacaggaaatggtcggctgct
gttgaggagaagttcagggcttttgctgaatcaaatcagaaacggtacactttcaaccca
atgaagagtggccagcgtgctttcttgcactctcttgcagaggattacggattccagagt
gtgtctcaggatcctgagccctacaggagtgtcatccttttcaaaggatccaataacggc
accgccccaaaaaagactattgcagaatatatcgcctcaaagccaagtgctgtcccaacc
agcaccccggtttctattcagcaactcaaaaaaccccaacgacaaccctacaatgctata
atcctgcaaaacatcagaatcgggcttttgaatgctgagattgaaagagagttagaaccg
gtcctaaaggacactcaactccgctttaaccttcagtggtctggtggcgacgacgtcttg
cttgtcccgaaagccagctcgtttggcaatgaccaaatcgatgtcgaactcgccgacgcc
cttattccgcaactcaagcgcctcattgccaagaatggcttggcagataaggccgaacta
tgccttgttggaaaagacggacagatagtcaatagggagagtcagcccaagtggtctctt
gtcgtcggaaagtcttcccccgcagctggaacaaagccccctgctcaggcgaatgttggg
tcgaagagtaggttcgacctcgagcacggaaaggccgaattagcacgtaagagtgctgag
agccttaaaaagaaggagaaaaagaaggggaaggaagttgacgttgtggacgattgggag
actgcggctgataacgaggcggaggctgcaggcggtggtctggcttcgtctgtgagtatg
gaggctaacatgggggacgaggttgaggggcaggtttga
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integrated database retrieval system