KEGG   Tuber melanosporum: GSTUM_00011159001
Entry
GSTUM_00011159001 CDS       T01282                                 
Name
(RefSeq) hypothetical protein
  KO
K14324  histone deacetylase complex subunit SAP18
Organism
tml  Tuber melanosporum
Pathway
tml03013  Nucleocytoplasmic transport
tml03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:tml00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    GSTUM_00011159001
   03015 mRNA surveillance pathway
    GSTUM_00011159001
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:tml03019]
    GSTUM_00011159001
   03036 Chromosome and associated proteins [BR:tml03036]
    GSTUM_00011159001
Messenger RNA biogenesis [BR:tml03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     GSTUM_00011159001
Chromosome and associated proteins [BR:tml03036]
 Eukaryotic type
  Histone modification proteins
   HDAC complexes
    Sin3A-HDAC complex
     GSTUM_00011159001
SSDB
Motif
Pfam: SAP18
Other DBs
NCBI-GeneID: 9185908
NCBI-ProteinID: XP_002841791
INRA: GSTUM_00011159001
UniProt: D5GN89
LinkDB
AA seq 248 aa
MSAASPLATTTAPIKVDRRRTTPFLLKLFYRQGGFHRLDDFRAHSQPREHVTIYTWRDCT
LNELSMLLSHALPNVCPPRSRCGFRLIFADTRYNATRYTSKDLGAVVPNGDAVLDNVGRK
TLSEVSFVVGDWIDVCIYPEGHGGVGATGNGRGGFGGGRGGVLGGPRENGFGGFRVRGGA
RGAVMGGVSVPSGEWRRGERVEDNVPLQEGGGGGGGGRRDTVTVGRGSGGYGRRGGGGGG
GRDRRYRD
NT seq 747 nt   +upstreamnt  +downstreamnt
atgtccgcagcctctccgctcgccactactaccgccccaataaaggttgaccgtcggcgc
acgacccccttcctgcttaagctcttctacagacagggcggcttccaccgcctagatgac
ttccgtgcacactcccagccccgcgagcatgttacaatttacacctggcgcgattgcacc
ctcaacgaactaagcatgctcctctcgcatgcgctgccaaacgtctgtccgccccgttcc
cgctgcggcttccgtctcatctttgcggacacgcggtacaacgcgacgcgctacacatca
aaggacctgggcgcagtggtgccgaacggcgacgcggttttggataatgttggtcgaaaa
acgctcagcgaggtctcgtttgtcgtaggggattggatcgacgtatgtatttaccccgag
ggccatggcggggttggagctacggggaatggcaggggcgggtttggaggcggaaggggc
ggggtcttaggtgggccgcgggagaatggatttggtgggtttagggtccgtggaggtgcg
cgtggggctgtcatggggggggttagtgttccgagtggcgagtggaggaggggtgagagg
gttgaggataatgttccattgcaggaagggggcggcggtggtggtggcgggaggagggac
actgttaccgtgggtagaggtagtggcgggtacggtagacgtggcggcggagggggagga
ggtagagatcgcaggtatagggattag

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