Tuber melanosporum: GSTUM_00011208001
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Entry
GSTUM_00011208001 CDS
T01282
Name
(RefSeq) hypothetical protein
KO
K17301
coatomer subunit beta
Organism
tml
Tuber melanosporum
Brite
KEGG Orthology (KO) [BR:
tml00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tml04131
]
GSTUM_00011208001
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
tml04147
]
GSTUM_00011208001
Membrane trafficking [BR:
tml04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
GSTUM_00011208001
Exosome [BR:
tml04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
GSTUM_00011208001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Adaptin_N
Coatamer_beta_C
Coatomer_b_Cpla
Cnd1
HEAT_2
Coatomer_g_Cpla
INTS1_R4
AP4E_app_platf
DUF5025
Motif
Other DBs
NCBI-GeneID:
9182207
NCBI-ProteinID:
XP_002841816
INRA:
GSTUM_00011208001
UniProt:
D5GNB4
LinkDB
All DBs
AA seq
950 aa
AA seq
DB search
MSSFLEHSYSIVHLDNAADQPSIQQLQQQLEKGTDESKVETMRRILTIMLNGDPMPQLLM
HIIRFVMPSKSKPLKKLLYFYYEICPKHDAGGKLKQEMILVCNGIRNDLLHPNEFIRGAT
LRFLCKVKEPELIEPLVPSARQCLEHRHAYVRKNAVLAIQSVYLHSEHLIPDAPELIQTF
LQTESDNTCRRNAFASLSAISHAKALEYLNSVFDDIANTDELTQLVLIEFTRKDAILNSG
NKARYLRLIFDLLEASSNTVVYEAATSLTALTSNPVAIKAAAGKFIELSIKVSDNNVKLI
VLDKVDQLRKKNDGVLDDLVMEVLRVLSSPDIDVRKKALDIAMDMASSKNVEEVVMLLKS
QLAKTVDQDYEKNNEYRQLLIHAIHTCAIKFSEVAASVVGLLMDFISDFNNSSAVDVIAF
VKEVVEKFPALRSSIIERLMGTLGEVRAGKVYRGALWIVGEYCVEQKDIREAWKRIRASL
GEIPILASEQRLLDEQPEDDAEQVGEGSKPAVPSGSRKVLADGTYATESALTSESASAAK
LEAVKAAQKPPLRSLILDGDFFLASVLSSTLTKLVMRHSEISSDASRTNALKAEAMLIMI
SIIRVGQSEFVKAKIDEDSVDRIMSCVRSLAEFETKKEIEKVFLEDTRKAFRVMVAAEEK
KRIAKEELEKGKNMIQVDDVLAIRQLSKKSAANGADIVEQDLEKATGADASVEDLSSKLS
RVVQLTGFSDPVYAEAYVKVHQFDIILDVLLVNQTTETLQNLSVEFATLGDLKVVERPTT
QNLGPHSFQSVQATIKVSSTDTAVIFGNVVYDGPSSTETNVVILNDVHVDIMDYIQPAYC
SETQFRTMWTEFEWENKVNINSKAKTLRDFLDQLMKSTNMACLTPEASLKGDCQFLSANL
YARSVFGEDALANLSIEKEGDDGPVIGFVRIRSRSQGLALSLGSLKGLQK
NT seq
2853 nt
NT seq
+upstream
nt +downstream
nt
atgtcttccttccttgagcactcgtactcgatcgttcaccttgataatgccgcagaccag
ccatcgattcagcagctacaacagcagctggaaaagggtaccgatgaatccaaggtggaa
actatgcgtcggattctcaccatcatgttgaatggcgatcccatgccgcaactcttgatg
cacattatccgatttgtcatgcccagcaagtcaaaaccactcaagaaattgctatacttc
tactacgaaatttgcccgaaacatgatgcaggtgggaagctcaagcaggagatgatattg
gtgtgcaatggtatccgaaacgaccttctccatcctaatgaattcatccgtggtgcaaca
ctgcgtttcctttgcaaagtcaaagagcccgagcttatcgaaccattggtcccctctgcc
cgtcaatgcctcgaacatcgtcatgcctatgtccgcaagaatgccgttctggctatccaa
tcagtatatcttcactcggaacatctgatacctgatgcccccgaacttatccaaacgttc
ctgcaaactgagagtgacaatacttgcaggaggaacgcttttgcttctctaagtgcgatc
tcacatgcaaaagctttagaataccttaattccgttttcgatgatattgccaatacagat
gagctgacgcaactcgtgctcattgagttcactagaaaggatgccatacttaactcagga
aacaaggcaagatatctaagattgattttcgatctgctcgaggcatcctcaaatactgtc
gtatacgaagctgcaacctccctaacagctttaacaagtaatccggttgcaattaaggct
gctgctgggaaatttatcgagctcagtatcaaagtttctgacaataatgtcaagcttata
gttctcgataaagtagatcagcttcgtaagaagaatgatggtgtgcttgatgatctagtc
atggaagtactacgggtcctgtccagtcctgatatcgatgtgcggaaaaaagctctcgat
atcgcaatggacatggcgtcaagcaaaaacgtagaagaggtggtaatgctgctcaagagc
caacttgctaaaaccgtggatcaagattatgaaaagaacaacgaatataggcaacttttg
attcacgccatccatacatgcgccatcaaattttctgaggttgccgcgagtgttgttggg
ctgcttatggacttcattagcgacttcaacaactcttctgcagtagatgttattgcattt
gttaaagaagttgtcgagaaattccctgcattgcgttcatctatcatcgagcgcctcatg
ggcactttaggtgaagtgagagccggaaaggtctatagaggagcattatggattgtcgga
gagtactgtgttgagcagaaagatatccgggaggcgtggaagcggatccgtgccagtctt
ggtgaaataccaatccttgcgtcggaacagcgtctactagatgagcaacccgaagacgat
gcagagcaagttggtgaaggttcaaaaccggcagtgccatcaggatcacgcaaagtgctt
gcagatggtacatatgcaactgaaagcgccctgacaagcgagtctgcgagtgctgccaaa
cttgaagctgtcaaggccgctcagaagccacctctacgctcactcatccttgacggcgac
tttttcttggcttctgtactttcatctactctcacaaagcttgtcatgcgccactcggag
atctcctctgacgcctctcgcaccaatgccttgaaagccgaggctatgctgatcatgatt
agtatcattcgtgttggtcagagtgaatttgtgaaagcgaagattgacgaggacagcgtg
gacagaatcatgtcctgtgtgcgttcgttggcggagtttgagacaaagaaggagattgag
aaggtcttcttggaagacaccagaaaggcatttagggttatggtggctgccgaggaaaag
aagaggatcgcaaaggaggagcttgagaagggaaagaacatgattcaagtcgatgatgtt
cttgctattagacaattgagcaagaagtcggcggctaacggagccgatatagtcgagcag
gatctggaaaaggctacaggggccgatgctagtgtcgaggacctttcctcgaagcttagt
cgcgttgtgcagctcaccggattttccgacccagtatatgctgaggcatatgttaaggtt
caccagttcgacatcattcttgacgttctacttgtcaaccaaaccaccgaaaccttgcaa
aacctctcggtcgaattcgccacattaggagatttgaaggttgttgaaagaccaactacc
cagaatcttggccctcactcattccagtctgtccaagcaacaattaaggtctcctccaca
gacaccgcagtaatcttcggtaacgtcgtctacgacggaccgtcatccaccgagaccaac
gtggtcatcttaaacgatgtacatgtcgacatcatggactacattcagccggcttactgc
agcgagacccaattccgaaccatgtggaccgagtttgaatgggagaataaggtcaacatc
aattcgaaggccaagacactgagagacttccttgaccaattgatgaagagtacgaacatg
gcttgcttgacccccgaagcaagcttaaagggggactgccaattcctgagcgcaaatctt
tacgcaagatctgtctttggtgaggatgcactagcaaacctcagcatcgaaaaagaaggt
gacgatggcccggtaataggcttcgtccgcatccgaagtaggtcccaaggcctcgcgctc
agcctcggttcgttgaagggcctgcaaaaataa
DBGET
integrated database retrieval system
