Tuber melanosporum: GSTUM_00011210001
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Entry
GSTUM_00011210001 CDS
T01282
Name
(RefSeq) hypothetical protein
KO
K02202
cyclin-dependent kinase 7 [EC:
2.7.11.22
2.7.11.23
]
Organism
tml
Tuber melanosporum
Pathway
tml03022
Basal transcription factors
tml03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
tml00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
GSTUM_00011210001
09124 Replication and repair
03420 Nucleotide excision repair
GSTUM_00011210001
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
tml01001
]
GSTUM_00011210001
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tml03021
]
GSTUM_00011210001
03019 Messenger RNA biogenesis [BR:
tml03019
]
GSTUM_00011210001
03400 DNA repair and recombination proteins [BR:
tml03400
]
GSTUM_00011210001
Enzymes [BR:
tml01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.22 cyclin-dependent kinase
GSTUM_00011210001
2.7.11.23 [RNA-polymerase]-subunit kinase
GSTUM_00011210001
Protein kinases [BR:
tml01001
]
Serine/threonine kinases: CMGC group
CDK family
GSTUM_00011210001
Transcription machinery [BR:
tml03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
GSTUM_00011210001
Messenger RNA biogenesis [BR:
tml03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Capping factors
GSTUM_00011210001
DNA repair and recombination proteins [BR:
tml03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
GSTUM_00011210001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pkinase
PK_Tyr_Ser-Thr
ABC1
Kinase-like
Seadorna_VP7
Motif
Other DBs
NCBI-GeneID:
9182209
NCBI-ProteinID:
XP_002841818
INRA:
GSTUM_00011210001
UniProt:
D5GNB6
LinkDB
All DBs
AA seq
378 aa
AA seq
DB search
MTTSNGDNTPAPAPNGGELAQQMNEETKKKYTKDRKVGEGTYAVVHLGHVKSTALPVAIK
KIKLSAMVDGISMDAIREVKFLQELRHENIIRLIDVFSSKNQNLNLVLEFLDSDLEMIIK
DTKIGFGGADIKSWLAMSLRGLWWCHKNFVLHRDIKPNNLLLATNGQLKLADFGLARSFS
DPYRAMTSTVITRWYRPPELLFGAKSYSSSVDIFSLGLVFAELLLRVPFLPGDSDVHQLR
LIATALGTPTEQNWPGVTKLPDYVIPNTEDIRPEQGSLFYGETFRTLTPEGLTLLMSMLR
LDPRKRWSAKQCLESEWFKEEPTPTKPELLPRKGGGKGIEKVGGDLKRRAGWDEGTDVAE
LEGHRGRKVARKLDFGGK
NT seq
1137 nt
NT seq
+upstream
nt +downstream
nt
atgacgacctccaacggtgataacacccccgcacctgcccctaacgggggcgaattagcc
cagcaaatgaacgaggagacgaaaaagaagtacactaaagatcgcaaggtcggggaagga
acctatgccgtggtccacctcggccatgtcaaatccactgccctccccgtcgcaatcaag
aagatcaaactctccgcgatggtggacgggatctcgatggatgcgatccgtgaagtcaag
ttcctgcaggagctgcggcatgagaacatcatccgactgatcgacgtcttctccagcaag
aaccagaacttgaaccttgtgcttgagttcctggattcggatctcgagatgatcatcaag
gataccaagattgggtttggcggcgcggatatcaagagttggcttgcgatgagcctgagg
gggctttggtggtgccataaaaattttgttttgcatagggatatcaaaccaaacaatctc
ctcctagcaacaaatggtcaactaaaacttgcggattttggcctcgcccgcagcttctcg
gacccgtaccgcgccatgaccagcacagtgataacccgctggtaccgtcctccagagctc
ctcttcggcgccaagtcctactcctcatcagtggacatattctccctcggcctcgtcttt
gcggaactcctcctccgcgtgcccttcctccccggtgactcggacgtgcaccagttgaga
ctaatcgccacggcactcggaacgcccacggagcagaactggccgggcgtgacgaagcta
ccggattacgttatcccgaacaccgaagatataagacccgagcaagggagtctcttctac
ggtgaaactttcaggacgctaacgccggagggcctgacgttgctcatgtccatgcttaga
ttggatccccgaaagcgctggtctgcgaagcagtgcttggagagcgagtggtttaaggag
gagcccacgcctacgaagccggagttgctacccaggaagggtggtgggaaggggattgag
aaggtcggtggcgatctcaagagaagggcgggctgggatgagggtaccgacgttgcggag
cttgaggggcatagaggtaggaaagttgccaggaagttggattttggcgggaaataa
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integrated database retrieval system
