Tuber melanosporum: GSTUM_00011217001
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Entry
GSTUM_00011217001 CDS
T01282
Name
(RefSeq) hypothetical protein
KO
K15216
RNA polymerase I-specific transcription initiation factor RRN3
Organism
tml
Tuber melanosporum
Brite
KEGG Orthology (KO) [BR:
tml00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tml03021
]
GSTUM_00011217001
Transcription machinery [BR:
tml03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
Transcription initiation factors
GSTUM_00011217001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRN3
Motif
Other DBs
NCBI-GeneID:
9182214
NCBI-ProteinID:
XP_002841823
INRA:
GSTUM_00011217001
UniProt:
D5GNC1
LinkDB
All DBs
AA seq
618 aa
AA seq
DB search
MPAPLRGTLFYRFGSKLPAMGGSEARSVIGVKREQPISESDSENKGPSSKRIKKNAGMKA
KATEINATNSLFRKFVNNALDERAAGSNANFELLRRKFSADPGNEDAPSSLELQNTILAL
TNTVSRLNGSCSQLVEDIINCQWVARESGFVVSYVKLLGNLVSAHSNYMDLIVNMLVQHL
VWLRSSAGQLPNHTPVKRSVIYERVHYALQFILDLVPTAAFSTLFPALISEFPHKSESKK
AHVTYVTNLLRVIEYAPSLRNKLLTFITDRVIKIDTEIQADLDDLEDEQGEELEAEITET
EMERNGDMVTNIKDTVDKLDVMLDLLFSYYSKSFPNKSVESPTQESIENFTLIMRLFNSI
ILPTYRSRYTQFLVFWAAQKAPRFSDTFCAAAITNALDNALQPGTRQAAAAYVASFIARA
KLMPGQYVQMATNVMCRWLGTFVDERSAECEGPDVSKWGGFYSVCQAVMYIFCFRWKDLR
VVEEDEFGIIGERWMGFLQDLNKAIISKFNPLKVCSPAVVETFAKIASYFQLVYCFTIIE
QNKRKGLSSQEELDSYFPFDPYNLRRSKQWIQGCYNEWEPIEGLENEEEEDNDSSGESDN
DNESIVEEEVDDESEAHE
NT seq
1857 nt
NT seq
+upstream
nt +downstream
nt
atgcccgctcccctgcgtggcaccttattctatcgctttggcagcaaattaccggccatg
ggtgggagcgaagcgagatccgtcattggtgtgaaacgtgagcagccaatttcggagtct
gattctgagaataagggcccttccagcaagaggattaagaagaatgcggggatgaaggca
aaggctacggaaataaatgcaaccaactccctgttccgaaaatttgtgaacaatgctctg
gatgaacgggctgctggaagcaatgccaattttgagcttctccggcggaaattctcggcc
gaccccggcaatgaagacgcaccgtcttctttggagttgcagaatactattttggctctt
acaaataccgtctcgaggctgaatggatcgtgttcccaactagtggaggatattatcaac
tgccaatgggtagcgagggagagcggctttgtggtatcatatgtgaagctattgggtaat
ttagtcagcgcacattcgaattatatggatctgatcgtcaacatgctcgttcaacatttg
gtttggttgcgtagttcggcaggccagctgcccaaccatacaccagtcaagagaagcgtc
atatatgagcgtgttcattatgcactgcagttcattcttgacctagtcccgactgcagct
ttctctaccctttttccggcattaatatctgagtttcctcacaaaagcgagagcaagaag
gcccacgttacttacgtcacgaatctattacgagttatcgagtatgccccttcacttcga
aacaagttattgaccttcatcaccgaccgggttattaaaatcgacacggaaattcaagcc
gaccttgacgacttggaagacgaacaaggcgaggagttggaggccgagattacagagaca
gaaatggagagaaacggggacatggtgacaaatatcaaggacactgtggataagctcgac
gttatgcttgacctattgttctcgtattactcaaagagttttccaaacaagagtgttgaa
agccctacccaagagtccatcgagaactttactcttatcatgaggcttttcaatagcatc
attctgcccacataccgctcccgctacacacaatttctggtattctgggccgcgcagaag
gctccacgcttctcagataccttctgcgctgctgctattaccaatgcattggacaatgca
cttcagcctggtaccagacaagcggcggcggcctatgtcgcttcattcattgctagggct
aaactaatgcctggccaatatgtccaaatggccacaaatgtcatgtgtcgatggctcggg
acttttgtggatgaacggtctgcagaatgtgaggggcctgatgtctcaaaatggggtggg
ttttacagtgtctgtcaagctgtcatgtatattttctgttttagatggaaagatctcaga
gtggttgaggaggatgagttcggtattattggagagcggtggatgggattcctccaggat
cttaacaaggccatcatttccaagtttaaccccttaaaggtttgttcaccagccgttgtc
gagacgttcgcgaagatcgcatcctactttcaattggtctactgctttaccatcattgag
caaaataagcgcaaagggctgagtagtcaagaggagctggatagttacttcccttttgac
ccgtacaacctaaggcgaagtaaacaatggatccaaggctgctataacgaatgggagcct
atcgaggggcttgagaatgaggaagaggaagacaacgacagttctggagaaagtgataat
gacaatgaaagtattgttgaggaagaagtagatgacgaaagcgaggctcacgaatag
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