Tuber melanosporum: GSTUM_00011228001
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Entry
GSTUM_00011228001 CDS
T01282
Name
(RefSeq) hypothetical protein
KO
K20372
TBC1 domain family member 20
Organism
tml
Tuber melanosporum
Brite
KEGG Orthology (KO) [BR:
tml00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tml04131
]
GSTUM_00011228001
Membrane trafficking [BR:
tml04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Rab associated proteins
GSTUM_00011228001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RabGAP-TBC
RabGap-TBC_2
Motif
Other DBs
NCBI-GeneID:
9182223
NCBI-ProteinID:
XP_002841832
INRA:
GSTUM_00011228001
UniProt:
D5GND0
LinkDB
All DBs
AA seq
451 aa
AA seq
DB search
MKDEKLSSTSPSPSPSPAVKPKSDDGVGPLSPESVSGSSSQDRWSTEKVKAIKEACRAGN
RKTVVELATSKDGLISDGIRKEAWPFLLGYGTVPHGKSVPPTDIPEACPSWKTLPPHRDE
DQVKLDVDRSFIYYPTNLSPRELRTRKTELLDLIVKVLRRHPMLCYFQGFHDICQVLLLV
LGPTDAVAAVEHISLLRIRDFMLPTMSPTSDHLQLLHPLLYSIDPKLFHHISRTQPFFAL
AATLTLYAHEIQEYNKIARLFDVFLAMDPVFPLYLFAEIVLRRRDELFEIPDDEPEILHS
ILSKLPKPLDLDDLISRAVSLLEQQPPESLSTWHKVSSRSVLKTSRSLDQSPPSLSHAEK
LFNQQWRELEWARKRKVMFKAIAKKGRITLLGLTLLVGTSAIGLGFYLQKKGTPIDSISG
SSVSPLLRRLLAGFGIGTGGCHFSVGNSCES
NT seq
1356 nt
NT seq
+upstream
nt +downstream
nt
atgaaagacgagaaactatcctcaacctcgccgtcgccatcaccgtcaccggcggtgaag
cctaagagcgatgatggggttggtccgctgagccccgaatcagtctccggatctagctca
caagataggtggtctacggaaaaagtgaaagctatcaaggaagcttgtcgagctggtaat
cggaaaactgttgtggagctggcaacatccaaagatggcctcataagcgatggaattcgt
aaggaagcatggcccttcctgttaggatatgggactgtcccccacgggaaaagcgtgcct
cccacagatatacctgaagcatgcccatcttggaaaacccttcctcctcacagagacgag
gatcaagtgaagctagatgtggaccgatccttcatctattaccccactaatttgtcacct
cgagagctcaggactaggaaaaccgagcttttagatttaattgttaaagtattgcggcga
catccgatgctatgttatttccaggggtttcacgacatctgtcaggtcctattattggtc
cttggtccaactgatgctgtggccgctgttgagcacatatcacttttgcggatacgggac
tttatgcttcctacaatgtcgccaacttcagaccacctccaacttctccatccactgcta
tattctatagatccaaaactttttcatcatatatctcggacccaacccttttttgcctta
gccgctacattgaccttatacgctcatgaaattcaagagtataacaaaatagcaagatta
tttgacgtatttttggctatggatccagtatttccactttatctgtttgctgaaattgtt
ctgcgaagaagggatgaattgtttgagatccccgatgatgaacctgaaatacttcattcc
atactctcgaaacttccaaagccactggatttagatgatctcatttctcgcgcagtcagt
ttgctcgagcaacaacccccagaatctttgtcgacttggcataaggtatcttcccgaagt
gttctcaaaacttcacgaagcctggatcagagtcctccaagcttgagccacgccgagaaa
ttatttaaccagcaatggcgtgaacttgagtgggctcgtaagagaaaggttatgtttaaa
gccattgcaaagaagggtagaattacccttctcggattgacccttctcgttgggacctcg
gcgattgggctcggattctacctacaaaagaagggtacccctatcgatagtatctcgggg
tctagtgtttctccattactcagacgtctcctagcaggattcggtattggcaccgggggg
tgccacttttccgtagggaattcttgcgaatcctga
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