KEGG   Tuber melanosporum: GSTUM_00011245001
Entry
GSTUM_00011245001 CDS       T01282                                 
Name
(RefSeq) hypothetical protein
  KO
K03138  transcription initiation factor TFIIF subunit alpha
Organism
tml  Tuber melanosporum
Pathway
tml03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:tml00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    GSTUM_00011245001
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:tml03021]
    GSTUM_00011245001
Transcription machinery [BR:tml03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIF
     GSTUM_00011245001
SSDB
Motif
Pfam: TFIIF_alpha
Other DBs
NCBI-GeneID: 9182236
NCBI-ProteinID: XP_002841845
INRA: GSTUM_00011245001
UniProt: D5GNE3
LinkDB
AA seq 762 aa
MASPAPSSAPTTGSPVPRMVARRREANSNPLVQRQKRPRAPVVNRQKLAAPPPPPPIAAA
PAKTVSSTASSVSGTGSAIAVDDEGEWHEFKLTTTKASLLKGLRHHVMRMQSKREIDPTD
PTQFTRPVRLHRRDPRAPLQGAKEEAAANQLAAANKAAEAGEKAKDEVEQAKKDAEKQAN
LDKIAPFGGAQKQKQKVFHKKTQQVFKSNDAEKKLRYEEFFPWFIEDFDNKNTWQGQLES
SLSKGVFAMFVLEEGAFRMVPIEKWYKFQEKNRFPTMTSEEAELEMKKNARPPRWLMKRT
EEKESKQRELEENARANKTLFTRKGDRLKGEADNDDLDFEDDQFADDEEAPIMEGEEQEN
KEIEKRIKKEQLSANFFDARDERDWEKEELERKKLEEVRRKHGKRVKKALMNREGNFTYE
SDSDANPYGTSGDEDSEDEEETARKEEEKKKEEERKKAEAAAEKEKADPRKSKTPPVATP
ASTSTPSAVAAPAPSQPKSKATGGTTGAPHPNAANKKDKHPAGTPLPLSDKKPQLKRAGT
PPHPESGTESRKKPKKNNAATNSTTGKSTTLPILGGTDKKNIVKLKVASESLSQIASSTP
SPSPPPPGVGAGNKKRKADVSAGARSGDERSGEMSDGPGSKKQRIKITTGGRSLSPAAAA
AASRQGTPGASRAGSPAAAAGAGNTSAPAARGTPGPPDFITDAEIRTVLSSNPEGVTLKF
IADKFKNRVRNEEVKKGLVSSLRRLSVSTDKRTYKLKEGVSA
NT seq 2289 nt   +upstreamnt  +downstreamnt
atggcttctcccgctcctagttccgctcctaccaccggtagccccgtcccccgcatggtc
gcacgcagaagggaagcgaattccaacccgctagtccaacgacagaagcgacctcgtgct
ccagtagtgaatcgacaaaaactagcggcaccaccaccccctcctccaatagcggcagcc
cccgctaaaactgtgtcaagcaccgcttcgtcggtctcgggaactggtagcgcaatcgct
gttgacgacgaaggagagtggcacgaattcaagctcacgactactaaagcttcactgtta
aaggggctgagacaccacgttatgaggatgcaatcgaagcgcgaaatcgaccctaccgat
cctacccagtttacccgtccggttaggcttcaccgtcgagatcctagagcgccgcttcaa
ggtgcaaaggaggaagcagcggcgaatcagttggctgcggcgaacaaggctgcggaggcc
ggggagaaagcgaaggatgaagttgagcaggcgaagaaggacgcggagaagcaagcgaat
ctggacaagattgcgccgtttggcggcgcacaaaagcagaagcagaaagtcttccataag
aagactcagcaggttttcaagagcaatgacgctgagaagaagctgcggtatgaggagttt
ttcccttggttcattgaggactttgacaacaagaacacttggcaggggcagctcgagagc
tcgttgagtaagggtgtcttcgctatgttcgtgttggaggaaggtgctttcaggatggtt
ccgatcgagaaatggtacaagtttcaggaaaagaacaggtttcccaccatgacgtctgaa
gaggccgaactcgagatgaagaagaatgcccgaccgccaaggtggttgatgaagcgcact
gaggagaaggagagcaaacagagggagttggaggagaatgcccgagccaacaaaaccctc
ttcactaggaaaggggataggttgaagggagaggcggacaacgatgacttggatttcgaa
gacgatcaatttgctgatgacgaggaggcccccatcatggaaggggaggagcaggaaaac
aaggagatcgagaaacgtatcaaaaaggagcaactctccgccaacttcttcgacgcccgt
gatgaacgtgactgggagaaggaggaactcgagaggaaaaagctcgaagaggtccgccgg
aagcacggtaagagggtgaagaaagcgttgatgaaccgcgagggtaacttcacatatgag
tccgactcggacgccaatccgtacgggacaagtggcgacgaggattccgaagacgaagaa
gaaaccgcgcgcaaagaagaggaaaagaaaaaggaagaggagcgtaagaaagctgaagca
gcagccgagaaggaaaaggccgatccccgcaagtccaaaactccccccgttgctactccc
gcttccacttcaactccctccgccgtcgccgcccccgccccctcacagccaaaatctaag
gccacaggaggcacaaccggagcgccacaccccaatgcagccaacaagaaagacaaacac
ccagccggtacgcctctcccactcagtgataaaaaaccacagctcaaacgtgcaggcaca
ccaccgcacccagagtcgggcaccgagtcgcgcaagaagccaaaaaagaacaacgccgcc
accaacagcaccactgggaaatcaacaactctccccatcctcggcggcacggataagaag
aacatcgtcaagttaaaagttgccagcgagagtctttcccagatcgcttcttcaactcca
tctccttccccgccaccgccaggcgttggagctggcaacaagaagcgcaaagcagatgtg
agcgccggagcacgtagtggtgacgagcgctccggcgagatgtcagacgggccagggagt
aagaagcaaaggatcaagatcaccactggcgggcggtcactctcacctgctgcagcggca
gcagcttcaagacagggcactcccggggcatcacgcgcaggctcccccgctgctgctgcc
ggcgctggcaatactagtgctccggcggcgaggggcacccctgggcctccagacttcata
acagacgccgaaatccgcacagtcctatcctccaatcccgaaggtgtaacactaaaattc
atcgccgacaagtttaagaaccgcgtccggaacgaggaagttaagaaggggcttgtctcc
agtctccgcagacttagtgtgtcgacggataagagaacttataagcttaaggagggggtc
agtgcataa

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