Tuber melanosporum: GSTUM_00011245001
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Entry
GSTUM_00011245001 CDS
T01282
Name
(RefSeq) hypothetical protein
KO
K03138
transcription initiation factor TFIIF subunit alpha
Organism
tml
Tuber melanosporum
Pathway
tml03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
tml00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
GSTUM_00011245001
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tml03021
]
GSTUM_00011245001
Transcription machinery [BR:
tml03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIF
GSTUM_00011245001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TFIIF_alpha
Motif
Other DBs
NCBI-GeneID:
9182236
NCBI-ProteinID:
XP_002841845
INRA:
GSTUM_00011245001
UniProt:
D5GNE3
LinkDB
All DBs
AA seq
762 aa
AA seq
DB search
MASPAPSSAPTTGSPVPRMVARRREANSNPLVQRQKRPRAPVVNRQKLAAPPPPPPIAAA
PAKTVSSTASSVSGTGSAIAVDDEGEWHEFKLTTTKASLLKGLRHHVMRMQSKREIDPTD
PTQFTRPVRLHRRDPRAPLQGAKEEAAANQLAAANKAAEAGEKAKDEVEQAKKDAEKQAN
LDKIAPFGGAQKQKQKVFHKKTQQVFKSNDAEKKLRYEEFFPWFIEDFDNKNTWQGQLES
SLSKGVFAMFVLEEGAFRMVPIEKWYKFQEKNRFPTMTSEEAELEMKKNARPPRWLMKRT
EEKESKQRELEENARANKTLFTRKGDRLKGEADNDDLDFEDDQFADDEEAPIMEGEEQEN
KEIEKRIKKEQLSANFFDARDERDWEKEELERKKLEEVRRKHGKRVKKALMNREGNFTYE
SDSDANPYGTSGDEDSEDEEETARKEEEKKKEEERKKAEAAAEKEKADPRKSKTPPVATP
ASTSTPSAVAAPAPSQPKSKATGGTTGAPHPNAANKKDKHPAGTPLPLSDKKPQLKRAGT
PPHPESGTESRKKPKKNNAATNSTTGKSTTLPILGGTDKKNIVKLKVASESLSQIASSTP
SPSPPPPGVGAGNKKRKADVSAGARSGDERSGEMSDGPGSKKQRIKITTGGRSLSPAAAA
AASRQGTPGASRAGSPAAAAGAGNTSAPAARGTPGPPDFITDAEIRTVLSSNPEGVTLKF
IADKFKNRVRNEEVKKGLVSSLRRLSVSTDKRTYKLKEGVSA
NT seq
2289 nt
NT seq
+upstream
nt +downstream
nt
atggcttctcccgctcctagttccgctcctaccaccggtagccccgtcccccgcatggtc
gcacgcagaagggaagcgaattccaacccgctagtccaacgacagaagcgacctcgtgct
ccagtagtgaatcgacaaaaactagcggcaccaccaccccctcctccaatagcggcagcc
cccgctaaaactgtgtcaagcaccgcttcgtcggtctcgggaactggtagcgcaatcgct
gttgacgacgaaggagagtggcacgaattcaagctcacgactactaaagcttcactgtta
aaggggctgagacaccacgttatgaggatgcaatcgaagcgcgaaatcgaccctaccgat
cctacccagtttacccgtccggttaggcttcaccgtcgagatcctagagcgccgcttcaa
ggtgcaaaggaggaagcagcggcgaatcagttggctgcggcgaacaaggctgcggaggcc
ggggagaaagcgaaggatgaagttgagcaggcgaagaaggacgcggagaagcaagcgaat
ctggacaagattgcgccgtttggcggcgcacaaaagcagaagcagaaagtcttccataag
aagactcagcaggttttcaagagcaatgacgctgagaagaagctgcggtatgaggagttt
ttcccttggttcattgaggactttgacaacaagaacacttggcaggggcagctcgagagc
tcgttgagtaagggtgtcttcgctatgttcgtgttggaggaaggtgctttcaggatggtt
ccgatcgagaaatggtacaagtttcaggaaaagaacaggtttcccaccatgacgtctgaa
gaggccgaactcgagatgaagaagaatgcccgaccgccaaggtggttgatgaagcgcact
gaggagaaggagagcaaacagagggagttggaggagaatgcccgagccaacaaaaccctc
ttcactaggaaaggggataggttgaagggagaggcggacaacgatgacttggatttcgaa
gacgatcaatttgctgatgacgaggaggcccccatcatggaaggggaggagcaggaaaac
aaggagatcgagaaacgtatcaaaaaggagcaactctccgccaacttcttcgacgcccgt
gatgaacgtgactgggagaaggaggaactcgagaggaaaaagctcgaagaggtccgccgg
aagcacggtaagagggtgaagaaagcgttgatgaaccgcgagggtaacttcacatatgag
tccgactcggacgccaatccgtacgggacaagtggcgacgaggattccgaagacgaagaa
gaaaccgcgcgcaaagaagaggaaaagaaaaaggaagaggagcgtaagaaagctgaagca
gcagccgagaaggaaaaggccgatccccgcaagtccaaaactccccccgttgctactccc
gcttccacttcaactccctccgccgtcgccgcccccgccccctcacagccaaaatctaag
gccacaggaggcacaaccggagcgccacaccccaatgcagccaacaagaaagacaaacac
ccagccggtacgcctctcccactcagtgataaaaaaccacagctcaaacgtgcaggcaca
ccaccgcacccagagtcgggcaccgagtcgcgcaagaagccaaaaaagaacaacgccgcc
accaacagcaccactgggaaatcaacaactctccccatcctcggcggcacggataagaag
aacatcgtcaagttaaaagttgccagcgagagtctttcccagatcgcttcttcaactcca
tctccttccccgccaccgccaggcgttggagctggcaacaagaagcgcaaagcagatgtg
agcgccggagcacgtagtggtgacgagcgctccggcgagatgtcagacgggccagggagt
aagaagcaaaggatcaagatcaccactggcgggcggtcactctcacctgctgcagcggca
gcagcttcaagacagggcactcccggggcatcacgcgcaggctcccccgctgctgctgcc
ggcgctggcaatactagtgctccggcggcgaggggcacccctgggcctccagacttcata
acagacgccgaaatccgcacagtcctatcctccaatcccgaaggtgtaacactaaaattc
atcgccgacaagtttaagaaccgcgtccggaacgaggaagttaagaaggggcttgtctcc
agtctccgcagacttagtgtgtcgacggataagagaacttataagcttaaggagggggtc
agtgcataa
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integrated database retrieval system