Tuber melanosporum: GSTUM_00011251001
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Entry
GSTUM_00011251001 CDS
T01282
Name
(RefSeq) hypothetical protein
KO
K10581
ubiquitin-conjugating enzyme E2 O [EC:
2.3.2.24
]
Organism
tml
Tuber melanosporum
Pathway
tml04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
tml00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
GSTUM_00011251001
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tml04121
]
GSTUM_00011251001
Enzymes [BR:
tml01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.24 (E3-independent) E2 ubiquitin-conjugating enzyme
GSTUM_00011251001
Ubiquitin system [BR:
tml04121
]
Ubiquitin-conjugating enzymes (E2)
Ubiquitin-conjugating enzymes
GSTUM_00011251001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UQ_con
tSH3-B_UBE2O
SH3-B_UBE2O
Motif
Other DBs
NCBI-GeneID:
9182241
NCBI-ProteinID:
XP_002841850
INRA:
GSTUM_00011251001
UniProt:
D5GNE8
LinkDB
All DBs
AA seq
1134 aa
AA seq
DB search
MEARKPGPPEGTWDTLFLEDTCYLKEFPELVGVISKTWHEPDDDWDNEPDFVPGSIATVN
ELNVLLDTGQPPRHFAVFEPSTPSQKSRLVHESEVKVLDRALAFGDVVKRNLRSPMSGTV
ISVSTEVSVQHSFQISSEPTSVVTGIPEAELCLAHEWNDGDLVVYKGCWIGVIEDVVDEV
AIRLGNGSVVIPEDSAGLEIPILSQEEEVAVRRCIASSAHDDSADVTDPPGERRPSGRSR
RTGTVPAPALLSPGFTVTTSKANLRRGKWLYGAYNPNARPTGVIVSVKTTKLGVRWLRQN
SMITGRFVPVERPSTWLELEEVLPKLKRFCKSTGGFVGLDGAPYTASGGATGGGVLQVGD
RVRFRDLPRAVTRYPGIKNISRSDAMGFDINTFGVVSTLTRVRVRWQDLTETVDNARDLT
PYLNVDEQEVWPGEIVVLKLDHDDSPKPPDSSCHGIVFPSANTQKRSKVGVVQNVNSRGR
VANVRWFRNPVVEFNCDCVMPGFKTGELGDEAEDVSVYEVMDLEAFTVRRGDFVSILPEY
NASPGSGNSVASAGSSAGRNEHGQIYPLRLEDISWARPEGTDTLNDNIPINALDNSLLMN
LSAALGASSDPQLQGVGRQLNQIPFSSAAQYPQRSSVPQNSSRPRTPCEDAYLTQPVDWL
GEVVDMGIDGLVTVRLGALDVPRDIRVLIDRLFIVFNDDMDFDDISEEEIDDSDDDLSFE
EKSDSGSDWSAVAGSRFAFGANSRTPVAEDICYEGGERLDNGEEEDWLTDDGMEVDSNSS
VVDMDISVASVSGGVQVTAVEHGMETDIIEEGEGAEAAKNVTTHTCPQPAPCPPSSMPAP
EAFSIPETSEKPAQFAILDTPVPSDHRFIKGYATRIEPTFLRRMHKEHNILSTSLPDGIV
VRGWESRLDLLRVLIIGPMNTPYELAPFFFDFYFPGAFPQSPPIVHFHSWTGGVGRVNPN
LYEDGKVCLSLLGTWHAEQKNEAWSAGGSTVLQVLVSLMGLVLVREPYYNEAGFGVFEGA
DEVSLASALYSEKAYILSRGFVKHVLETPMSGFEDEIKWLYLPHQRGGLNLLEAVIGSTR
EVVKRSECEGTMTGEKAEETVRERVGSVTAGALILLKRNLQALERIMERVSLCL
NT seq
3405 nt
NT seq
+upstream
nt +downstream
nt
atggaagcgcgaaagccgggacctccagaaggaacttgggacacgttgtttctggaggac
acatgttaccttaaggaatttccggagctcgtgggtgttatttccaaaacatggcatgag
cctgacgatgattgggataatgagccggatttcgtccctggcagtatcgctacggtgaac
gaattgaacgttttgctggacactggccagcctccccgccactttgccgttttcgagcca
tcgacaccgtcccagaagagcaggcttgtgcacgagtctgaagtgaaagttcttgaccgg
gcgcttgctttcggagatgttgtgaaacggaatctaaggtctcccatgtcaggaactgtg
atttcagtttcaacagaagttagtgtgcaacattccttccagatttcttcggagccgaca
tctgttgttactggtatccctgaagctgagctttgtctcgcgcatgaatggaacgatggc
gatctcgtggtctataagggttgttggatcggcgttatcgaggatgtggttgatgaagtt
gctattcgcttggggaatggaagcgtggtgatacctgaggattctgctggattggaaatt
cccattttgagccaggaagaggaagttgccgtccggcggtgtattgcgtcttcggctcat
gatgatagtgcagatgtgactgacccacctggtgagcgtcgaccgtcggggcgctctcga
cgtacgggaacagtgccggcaccagctcttctctcgccgggcttcacggtgactacttca
aaagcaaatcttcgtagggggaaatggttgtatggagcttataatccgaatgcccgccct
actggagtgatagtttctgtaaagacaacaaagcttggtgtgcgctggctccgccaaaat
tcaatgattactggtcgcttcgtaccagtggaacgaccaagtacgtggctggagcttgaa
gaggtgctgcccaagctcaagaggttctgtaaatcaacgggtggatttgtcggcttggac
ggagcgccgtatactgctagtggtggggccaccggtggtggagttctccaagttggagat
agagttcgatttagggacttgcctcgcgctgtcacaaggtacccaggaataaaaaacatc
tcgaggagtgatgcgatgggatttgatatcaatacatttggggtggtttccacgttaacg
cgtgttagggtacgttggcaggatttgacggagacggttgacaatgctagggatttaaca
ccctatcttaatgttgatgagcaagaagtttggcccggggaaattgttgtgttaaaactt
gaccatgacgattcacccaaacctccggactcttcttgtcatggaattgttttcccctct
gccaatacccagaagaggagtaaagtcggggtggtgcagaatgtaaactctcgggggcga
gtggcaaatgtcaggtggtttaggaatcctgttgttgaattcaactgcgattgcgtgatg
ccaggttttaagactggggagcttggagatgaggccgaggatgttagtgtttacgaagtg
atggaccttgaggcgttcactgtgagaaggggcgatttcgtatcaattttgccggaatat
aacgcgagtcctggatccgggaattctgtggcctctgctgggagcagcgcaggtcgaaat
gagcatggccaaatataccctctgcggctcgaggatatcagttgggcgagaccagaagga
acggatacgttgaatgacaatataccaatcaatgcgctggacaatagcctactgatgaac
ttgagtgcagcattgggtgctagtagcgacccgcaattgcagggagttggtcgtcagttg
aaccaaataccgtttagtagcgccgctcaatacccgcaacgctcatcagtgccccaaaac
tcatctcgacctaggacgccttgcgaagatgcttatctaacgcaacctgttgattggctt
ggcgaggttgttgatatggggattgatggtttggttactgtgcggcttggagcattggat
gtgcctagggatatcagagttttaattgaccgacttttcattgtattcaatgacgatatg
gattttgatgatatctcggaagaggagatagatgattcggatgatgacctaagctttgaa
gagaagtcagattcaggcagcgactggagcgctgttgccggttcccggtttgcttttggg
gccaattctcggactcctgtcgcagaggatatctgctacgaaggcggcgagcgtcttgac
aatggggaggaggaagactggcttacggatgacggtatggaagtggatagcaactcctct
gttgttgatatggatatctctgttgcctccgttagcggtggcgtccaagtaactgctgtg
gagcatgggatggaaacggacataatagaggaaggtgagggagctgaagctgcaaagaat
gtgaccactcacacctgtcctcaacccgctccgtgtccgccgagcagtatgccagctcca
gaagcattctcgataccagaaacttccgagaagcctgcccagtttgccattttagatact
ccggttccctccgatcacaggttcataaagggttatgcaacacgcatagagccgacgttt
ctccgccgcatgcataaagaacataatattctctcgacgtccctcccggatgggatcgtg
gtcagggggtgggagtcgcgtcttgaccttttgcgtgtgcttataatcggtcctatgaac
accccgtacgagctggcgccattcttcttcgatttctattttcctggcgcttttcctcaa
tctccgcctattgtgcattttcatagttggaccggaggtgttggaagggtcaatccgaat
ctatatgaagatggaaaggtttgtttgagtcttttgggaacatggcatgcagagcagaag
aatgaggcatggtcagctgggggtagtactgttttgcaggtccttgtcagtttgatggga
ttggtacttgttcgggagccgtattacaacgaagccggcttcggggtcttcgaaggagct
gatgaagtatccctcgcctcagccctgtattctgagaaagcctatatcctctcccgcggc
ttcgtgaagcacgttctggaaacacccatgtccggtttcgaagacgagatcaagtggctg
taccttccccaccagagaggcggcctgaatctccttgaggcggtaatcggctcaaccagg
gaagttgttaagcgctctgagtgcgagggaactatgactggagagaaggcggaggagacg
gtgcgggagagagttggcagcgtcactgctggtgcgctaatcctgttgaagaggaacctg
caagctcttgagaggattatggagagggttagtctttgcctgtaa
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integrated database retrieval system
