Tuber melanosporum: GSTUM_00011264001
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Entry
GSTUM_00011264001 CDS
T01282
Name
(RefSeq) hypothetical protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
tml
Tuber melanosporum
Pathway
tml03420
Nucleotide excision repair
tml03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
tml00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
GSTUM_00011264001
03430 Mismatch repair
GSTUM_00011264001
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tml03400
]
GSTUM_00011264001
Enzymes [BR:
tml01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
GSTUM_00011264001
DNA repair and recombination proteins [BR:
tml03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
GSTUM_00011264001
MMR (mismatch excision repair)
Other MMR factors
GSTUM_00011264001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrD_C
UvrD-helicase
AAA_19
UvrD_C_2
AAA_30
AAA_12
AAA_11
ADDB_N
Motif
Other DBs
NCBI-GeneID:
9182246
NCBI-ProteinID:
XP_002841855
INRA:
GSTUM_00011264001
UniProt:
D5GNF3
LinkDB
All DBs
AA seq
1031 aa
AA seq
DB search
MSFRASQLDLEPILAGLNNAQRLAVTNPSSVVQILAPPGSGKTRTLTSRAAWLLCPPQSL
DPRNVIVATFTVKAAREMKERISKLVGNGVEGRLVLGTFHCIARKYLVKYRHLVDIKPGW
GIADSSDSLGIRIIKRRKSPLDPSQVRSRISYFKARNSSPVADALPPPSTAGTQSAQARV
RDIPTEDFAQIFEDYEAALGASNLLDYDDLLLRCLELLRHNLECVSNVEAVLIDEFQDTN
LVQFELMKLLAWKRERITIVGDPDQSIYGFRAAEIRNLSRMVRAYPQTLVVHLEQNYRSS
ASILLAALEVIEQDHDRPKKPLTPSHSVGTRPVLRRIPSAFLEASWIVSEIQRVRAMTGG
MVELGDIAILVRSANLTRNIETSFVKAGVAYKMVGGLRFYDRVEIKTLLDYLRIVQNPGN
NDALTRIVNTPSRKVGDTTIKALLDEADKRAKSVWEIIRTGLGGIWKDVRIAKAAEKGLG
DFMGIILSTQKQLEGDEQGKGLVDVVEFLMRRIGYEDYLRRSYPEDFDAKWSNVSELLSQ
AQEVERLDDDEDTLPDIDGLPQSQVEQSRLQLVLDRFLSNTALANEVKGDDETVKQGQVT
ISTIHASKGLEWPIVFIPAVYQGSIPHSRADDTDEERRLLYVAMTRAQALLYMSCAVRNS
QGDKTKLSQFLTHRSLYPLLDSRGPTLGFSSVQSVSGILGRECPSEVHIQIAVDKSGVAS
TLDDQFPDRDPLESDSEGDDLGEDGARLKRRRLQSEQASCKKTNKPLDEGFRPVVSREWP
AGRMEKQPPGAVVGFRSAGSHMQELKETRLNQEADRARVEKEEQRRGPTMAEPPNRSGNL
IEGTPATAVRSNSRPADQGSLHRYFGQRMPEPVRKVVPPKAHTATEVIRDKSIRDKSLKE
QIEALPQPKFPVRPDHHSDVMLLSSSPARAPPKRRREKEEIPSSPPAFSVPFSRYLESAV
AERCVEIEETTIAGASAAVIHNAAGSRNTTTVTNPNAVAMAATATTAPKRRTLGVRRSMG
DGWRNRASANR
NT seq
3096 nt
NT seq
+upstream
nt +downstream
nt
atgtcttttagggcatcacagttagatcttgagccgatacttgccggactgaacaatgcc
caacgactagctgtgacgaacccgtcgtctgtggtacagatacttgccccacctggttcc
ggtaaaactagaacactaacctctcgcgccgcatggctactatgtcctccgcagtcgctg
gacccccgaaatgtcattgtggctactttcaccgttaaagctgcccgggagatgaaggag
cggatatcgaagctcgttgggaacggagtggaaggtcggctggtgctgggcactttccat
tgtatagctaggaagtacttggtaaagtataggcatctggtagacatcaagccggggtgg
ggaattgcggattccagtgatagtttgggaattaggataatcaaacggaggaaatcgcca
ttggatccaagccaggttagatctcggatatcctatttcaaagcccgaaatagctctccg
gtggcagatgccctaccacctccttcaaccgcagggacacaatctgcgcaggctagagtt
agggacattcctactgaggatttcgctcagattttcgaggactacgaggcggctttgggg
gcgtcaaacttactcgactatgacgacctgttgcttcggtgtcttgagctgcttaggcat
aacctggaatgcgttagcaacgtagaagcagttcttatcgacgagtttcaggatacgaat
ttggtccagtttgaattaatgaagctgcttgcctggaagcgtgaacggattacaattgtt
ggagatccggaccagagcatatatgggttccgagctgcagaaatccgtaacctgtcgagg
atggttagggcttatccacagacacttgtggttcaccttgagcagaattataggagctct
gctagtattttgcttgctgcattggaggtgattgagcaggatcatgatcgtccgaagaaa
ccccttaccccctcgcattcggtgggaactaggccggtcttgagaaggattcccagcgct
tttttggaagcaagttggatagtctcagagattcagagggttcgagctatgactgggggt
atggtggagcttggtgatatagctatcctcgtgcggtccgcgaatttaacgagaaatata
gagacgagctttgtgaaagctggagtggcatacaagatggtaggagggttgaggttttac
gatcgcgtggagattaaaactcttctagactatctgagaatagtacagaatccgggtaat
aatgatgcgctgactaggattgttaataccccttcgaggaaggttggggatacaacgatt
aaagcattacttgatgaggcggacaaacgagccaagagcgtgtgggaaattatcagaacg
gggctcggtggcatctggaaagatgtgaggatcgccaaagctgccgagaagggtctgggt
gactttatgggtattatcctgtccacccagaagcagcttgaaggggatgaacaagggaaa
ggtctggtggatgttgtggaattcttgatgaggagaataggctatgaagactacctcaga
aggagctatcccgaagatttcgatgcaaagtggtctaacgttagcgagctcctttcacaa
gcacaggaggtggagaggttggatgacgacgaggatacgcttccagacattgatgggttg
ccgcaaagtcaggttgagcagagcaggttgcagttggtgctggaccgcttcttgtctaat
acggcgctggcgaacgaggttaagggggatgatgagacggttaagcagggacaggttaca
attagtaccattcatgcttctaaagggttggaatggccaatagtttttatcccggcagtc
taccagggcagcattccgcattcgagggcagatgatacagatgaagagagaagattgctc
tatgttgcaatgactagggcacaggcgcttttgtatatgtcatgtgctgtgaggaattct
caaggagacaagacgaaactctcgcaattcctcacgcatcgctctttatatcctcttctt
gacagccgtggacctacactcgggttctcttccgtccaatctgttagcggaattcttggc
cgagagtgcccttcggaggttcatatccaaatagctgttgataagagtggggttgcgtcc
accttggatgaccaatttcctgatagggatcccttagagtctgatagtgagggtgacgac
cttggtgaggatggggcacggttgaagaggaggaggttacagagtgagcaagcttcttgc
aaaaaaacaaataaacctttagacgaaggattcagaccagttgtttctcgggagtggcct
gcggggaggatggaaaaacaaccacctggggcagtggtagggtttagaagtgcgggtagc
cacatgcaggagctcaaggagactcggttaaatcaggaggcggatagggctcgagttgag
aaggaagaacaaaggcggggtcccacgatggccgaaccaccaaacagaagcggtaacttg
atcgagggaactccggctaccgcagtgcgatcgaatagcaggccggcagatcaagggagt
ctgcacaggtatttcgggcaaaggatgccagaaccggtgagaaaggttgttccgcctaaa
gcacacactgcgacggaggtcataagggacaaatctataagggataagagtcttaaggaa
caaattgaagcgctacctcagcccaaattccccgtccgacctgaccatcacagtgatgtc
atgttattgagttcttcgcctgcgcgtgcgccgcccaagagaaggcgagagaaagaagaa
atcccctcctcaccaccggcgttttccgtgccgttttctagatacttagagtcagcggta
gcggagaggtgcgttgagattgaagagactaccatcgctggagcgtcggctgcagttata
cataacgcagcaggctcaaggaatacaactacggtgacaaatcccaatgctgtagcgatg
gccgcgacagcgaccacggccccgaagagaagaactttgggcgttcgacggagtatgggt
gatggatggagaaatagggcgagtgctaaccgatga
DBGET
integrated database retrieval system
