Tuber melanosporum: GSTUM_00011389001
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Entry
GSTUM_00011389001 CDS
T01282
Name
(RefSeq) hypothetical protein
KO
K27103
serrate RNA effector molecule
Organism
tml
Tuber melanosporum
Brite
KEGG Orthology (KO) [BR:
tml00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tml03019
]
GSTUM_00011389001
Messenger RNA biogenesis [BR:
tml03019
]
Eukaryotic type
mRNA processing factors
Other processing factors
GSTUM_00011389001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SERRATE_Ars2_N
ARS2
DUF4187
Motif
Other DBs
NCBI-GeneID:
9186205
NCBI-ProteinID:
XP_002841938
INRA:
GSTUM_00011389001
UniProt:
D5GNN6
LinkDB
All DBs
AA seq
823 aa
AA seq
DB search
MSYPGNDRYNGGDRDRDRSRGSRDRATLESDYSRLGDVEWGYGRGRGRSPGPMRRLPPRR
SRSPPVGGNIDRYVPRSPQPRRSRSPSRSRFEYAQHGVPQLPMVGKPGAIDRYVPPHNGT
APPMYFDPHRLDYQVTFNYFSDWYHQENPGGTGPNMKEEVKQKYDEYKDELTARLAKLFV
TTHKNDEWFKERYVPGEKEVTKAKIVDYRRGAFERWRAQMQSGALDNIDRETGTGTAPKS
EDTGLEPGEEIEEINRTVEDGGLKPVLLIKTISPTVSRAQLEELASTNLSNFHYISLSDP
NPLKKFHRIGFILLSHTDPTSEPAPVDESIVELLNGKSIHDDVHGDFVCHVGIHNGPTSA
RTKKVLNEAMSLPENLKREAKLVEKCIEKLEAELHRDGDDSMIEYDGWEMIKDKVEEWGR
GEREKRMGSEEEGEESGESEVELKIIKKTIDMGVEYLRRVFSFCIYCVSSSDSIVELTRK
CPGGHMRRPTPASDFAPDNRTVNWTKAWQDKLEFFVSPPQPNDEDYKDRLRKVGGKPVPE
AVEDEVQRSMKQEDEGKYRCKVAGCTKLFKAEEFWRKHLDKKHGEWLQLLKTEAQLVNSY
VLDPCRVHPPKIEQNNQGGFQTVQTGGNRGFAPMMSLGTFGGPAPPPGTFQPPPGFNFNA
PFFAGHHGNGADKYVPNHLMPAAGPGLPDAGRGRDGGNGVGPQRRRENRVPPMGAAGLPI
VVGTGRERFAPYSARRDRGDRERERERRDREMRELARQPGNAPANRASGPVGGTPSAAPT
STSSGTSGGGEAELAVLGRSVKSYMDLDAAGGEGKKSVEELDY
NT seq
2472 nt
NT seq
+upstream
nt +downstream
nt
atgtcttaccctggaaacgaccgctataatggcggtgacagggatagggacaggagccgg
ggaagtcgggatcgcgctacattggagagcgattatagccggttgggtgacgttgaatgg
ggttacggaagagggcgaggaagaagtcctggccccatgcgtcgtttaccacctcgccgt
tcacgatctccccctgtaggtgggaatatcgatcgttatgtgcctcgatctcctcaaccc
cgtcgctctcgctcaccttctcgttcgcgctttgagtacgctcagcatggcgtcccccag
cttcccatggttgggaaacctggcgcaattgatcgctacgttccaccacacaacgggact
gcccctcccatgtacttcgatcctcataggctagactaccaagtcacgtttaattacttc
tctgattggtaccatcaggaaaatccaggtgggactggccctaatatgaaggaggaggta
aagcagaagtatgatgaatataaggacgaacttactgcgcgcctcgcgaagctgtttgtg
accacacataagaatgatgaatggtttaaagaacgctacgtccccggtgagaaggaagtc
acaaaggcgaagatagtggactatagaagaggggccttcgagagatggagggctcaaatg
cagagtggggctttagataacattgaccgtgaaactggcactggcactgccccaaagtcc
gaagatactggtcttgagcctggtgaggagattgaggagatcaatagaaccgtcgaagac
ggtggtctgaaaccagtattgttgatcaagactatcagtcctactgtcagccgagctcaa
ttagaagagcttgcctctacaaatctttcaaattttcactatatctcgctctcggaccct
aatcccttaaagaaatttcaccgtatcggcttcatccttctttcccacacagaccctaca
tctgagcccgcaccagttgatgaatcgatcgtcgaacttctcaatggaaagagcattcac
gatgacgtccacggcgactttgtatgccatgtgggaatccataatggaccgactagtgct
agaaccaagaaggttctaaacgaagccatgagtctgcctgagaatctgaagagagaagcc
aagttggttgaaaaatgtatcgagaaactggaagcagagcttcatcgcgatggcgatgat
tcaatgatagaatatgacggctgggagatgatcaaagataaagttgaggaatggggccgt
ggtgagcgagagaaaaggatggggagtgaggaggaaggggaggagagtggtgagagtgag
gtcgagcttaagatcatcaagaagaccatcgatatgggggtggaataccttcgtcgggtc
ttttcgttttgtatctactgtgtttcctcatccgactccattgttgaactcaccaggaaa
tgccccggcggccatatgcgccgccctaccccggccagtgattttgctccggacaaccgc
accgtcaattggaccaaagcctggcaggacaaactggagtttttcgtcagtcccccacag
ccaaatgatgaagactacaaagacaggcttaggaaagttggtggcaagcctgttcctgaa
gcagtcgaggatgaggtccaacgaagcatgaagcaagaagatgaaggtaaataccgatgt
aaagtcgccgggtgtaccaagttgttcaaagccgaggagttctggaggaagcacttggat
aaaaagcatggcgaatggttgcagcttttgaagacagaagctcaactagtcaacagctat
gtcctggatccgtgcagagttcatcctcctaagatagaacagaacaaccaaggagggttc
cagaccgttcagaccggtggtaaccgtgggttcgcgccgatgatgtctttgggcactttc
ggcggccctgctcccccgcctggaactttccaaccaccccccggattcaacttcaatgcg
ccattcttcgcagggcaccacggcaacggtgcggataagtacgtgccgaatcacctcatg
ccagccgctgggcccggcctcccagacgccggtagaggtagggatggtggaaacggggtt
ggtccacagcgccggagagagaatagggtgcctccgatgggtgctgcagggcttcccata
gtcgtgggcactggacgggagaggttcgctccctacagtgcgagaagggataggggcgac
agggagagggagagggagagacgcgacagagagatgagggaactcgcgaggcaacccggc
aatgctcctgccaatagagcatctgggcctgttggaggaacccctagcgccgcacccacg
tccaccagcagtggtactagtggtgggggagaggcagaattggcggtgttgggaaggagt
gtcaagagttacatggacctagatgcagctggtggggagggcaaaaagtcagtcgaagaa
ctggattactag
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