Tuber melanosporum: GSTUM_00011390001
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Entry
GSTUM_00011390001 CDS
T01282
Name
(RefSeq) hypothetical protein
KO
K14570
RNA exonuclease [EC:3.1.-.-]
Organism
tml
Tuber melanosporum
Pathway
tml03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
tml00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
GSTUM_00011390001
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tml03009
]
GSTUM_00011390001
Ribosome biogenesis [BR:
tml03009
]
Eukaryotic type
Pre-60S particles
RNases
GSTUM_00011390001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
Motif
Other DBs
NCBI-GeneID:
9186206
NCBI-ProteinID:
XP_002841939
INRA:
GSTUM_00011390001
UniProt:
D5GNN7
LinkDB
All DBs
AA seq
662 aa
AA seq
DB search
MGKRKHRNAFPPPKASSSSSNARDAPSPPPLPAIKFGEFKLTSTSGPFTPNPVTTTTITN
TATTTATTVNSMGREVGEDDGGGEWQIAKRHKKSKHKYPSFEVSPARLKNAVKLSDIQSL
VLWLLADGTAPQWLLVKNKNEIRGVVVVMVPGLEMAIPGSKPGLGWGKRAFFPQELKKAQ
LQVCVRGFADMFSHVWPVVAPGDERGRVYSAIAGFLNTPIPKGKAPQDPDKYTTSQRIGI
TRLVMPFGELVENEYPVHSVHATTSSVAETTKVGWVETDLSRGNGRENNEGGSVTEAKTI
YAMDCEMVQTKQGLELVRISLVSWDGETIYDTLVKPDSPITDYLTPRYSGVTKAMLDPVT
TSLKDVQNHLLRLLNNDTILVGQSLNADLSAIKIAHPHIVDTSVIYNHPRGPPYRASLKW
LSTKHLKREIQKDGSNGHDSIEDAKACLDLLKLKLERGLEYGTSSAAAESIFKRLSRVRP
VPRIGGVVDYGTPDKWWSPSAARVIQAKDDAEVATGIVKSICGDPPGTRDGHPKLDLVWG
RMHALEALRGWNKAAAPEEGPPIPIENTESNHAVIAQGVRDVATQLKQIYDSLPPCTAFI
VYSGTGDPRELRRLQDMQREHKRQYMTMKWDELTVKWTDTENRALAAAANTTREGIAFLT
VK
NT seq
1989 nt
NT seq
+upstream
nt +downstream
nt
atgggaaaacgcaaacaccgaaacgccttcccaccacccaaggcttcgtcctcatcgtca
aacgcccgcgacgcaccctccccaccgccacttcctgccatcaagttcggagagttcaag
ctgaccagtacatctgggccatttacccctaatcccgtaaccactactaccatcaccaac
accgcaaccaccaccgccacgacagtcaattcgatgggaagagaagtaggggaagatgac
ggcgggggggagtggcagatagctaaacgacataagaagtcgaaacacaagtatccgtct
ttcgaagtctcgcctgccagactgaaaaacgctgtcaagctcagtgacatacagtctctt
gttctgtggctgttggctgacgggactgcgccccagtggctgcttgtcaagaataagaat
gagattcgcggggttgtggttgtcatggttcctggattggagatggcgattcctggttca
aagccgggcctgggttggggaaagcgtgcgttttttccccaggaacttaaaaaggcccaa
ttacaggtctgtgtgagagggttcgcggatatgttttcccatgtttggccagttgtagcc
cctggggatgagcgtgggagggtgtactccgctatagctggattcttaaatacacctatt
cctaaagggaaggccccacaggatcccgataagtatacaacgagtcagaggataggcatc
actcgacttgttatgccctttggagaactggttgagaatgagtatccggtccattctgtt
catgctacgacctcatctgtggcagaaactactaaagttgggtgggttgaaacggatctt
tcgagggggaatggtcgggagaataacgagggtggttccgttacagaggcaaagacaatt
tacgctatggactgcgagatggtgcagacgaagcaagggttggaactagtgagaatcagt
ctcgtgagttgggatggggagacgatttatgatactctggttaagcccgatagtcctatt
acagactatttgacgcctaggtattccggcgtgaccaaggcgatgctcgatcccgtcacc
actagcctgaaagatgtccaaaaccacctcttaaggctcctcaataacgatacaattctc
gtcggacaatccctcaacgccgatctcagcgccatcaaaatagcccatccacatatcgta
gacacctcggtaatttacaatcacccccgcggacccccatacagagcttcattaaaatgg
ctctccacgaagcaccttaaacgcgagattcagaaggacgggtcaaacggtcatgactcg
atagaagatgcaaaagcctgtctggacctcttaaagctcaaactagagagagggctcgaa
tatggaactagcagcgcggccgccgagagcattttcaaacgactatccagggtgcggccg
gtaccccgcattggtggagtcgtcgactacgggacaccggacaaatggtggagccctagc
gctgccagagtgatccaggcaaaggacgacgcagaggtagctacaggcattgtaaaatct
atctgtggggatcctcccggcactcgtgacgggcatcctaaacttgatttagtctggggc
cgtatgcatgctctcgaggctctccgcggatggaacaaggcggccgcaccagaggagggt
cctcccatccccattgaaaacaccgagtcgaatcatgctgtgattgcccagggagtcagg
gacgttgcaacccagctaaagcagatctacgactccttgccaccttgcactgctttcatt
gtgtactccggtaccggagaccctagggaattaagaagactacaggatatgcagagggag
cacaaaaggcagtacatgactatgaagtgggacgaacttactgtcaaatggacggatacg
gagaaccgtgcgttggcagctgctgcgaatactacccgggaggggatcgccttcttgacg
gttaaatag
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