Tuber melanosporum: GSTUM_00011468001
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Entry
GSTUM_00011468001 CDS
T01282
Name
(RefSeq) hypothetical protein
KO
K10589
ubiquitin-protein ligase E3 C [EC:
2.3.2.26
]
Organism
tml
Tuber melanosporum
Pathway
tml04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
tml00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
GSTUM_00011468001
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tml04121
]
GSTUM_00011468001
Enzymes [BR:
tml01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
GSTUM_00011468001
Ubiquitin system [BR:
tml04121
]
Ubiquitin ligases (E3)
HECT type E3
GSTUM_00011468001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HECT
Motif
Other DBs
NCBI-GeneID:
9182809
NCBI-ProteinID:
XP_002841983
INRA:
GSTUM_00011468001
UniProt:
D5GNT1
LinkDB
All DBs
AA seq
1175 aa
AA seq
DB search
MYPTFTGSSRKHRIVNLSGRKPAAAPSRTSQFSRAPATQASVLHAQQERAQREATRQRLR
AATTVQRVWRGRREAEAQRAIWRTEWDNVFAGGAGGDFAQASDSKKRIEYGVTLFLAFYE
RGHRPGRWRKRDSGDFLRMKVLVLFMAQYLSQASNRPCLGARARGVDGHGTLMMEKFGKL
LIEVLQEEVLTADSLSVLPSLAVELPGIVDASYYKALSRITASSKSSPEEILDAVLTPLQ
HVGKENGQRNAEIHRDFAANYLVTPDLPEHLQHSGFERLKKTVGFGKLIKAMSESPGQWV
VATGEEKLWMLSYIIHFTPSMSGSEVIDLTGDKPLVSRGFEEKSYTHVMSLLLSSVAREA
SKRIQVVDISMGVEGDEEDEDDSSGERPHQNKNQPLPPFVKSRLESLIQQPSITSIFSLA
GPPSSDDRDTKMLAGFALTLLLVFPNVKQEVCMWLCLAETKDGVSVLRYLWAAVRRSELF
LGVAKDIQLAVSSLRKRNLSTDGPSIRDSDNGEWNLILLFIELYGFLLLVMDDDEFFARS
RAEKKARQLPLEDVENLSVFLKNLAFAMYYWGGEIMGEDKQRSDGGAVFFKDQPNQVWEV
EYLKTAVTGLLKAIYARDSRRKFLPSNHWLMTAAGFNIEGFIPAVVQEEENRHKMESEGE
DDEEPERQYDQAAVAALSPHEQRNLQLESRDRTQRKRQRALYLAAITPRLEILQNLPFFI
PFATRVQVFREFVSGDQRRRRGGFVDPDQWRAAMLSQNSRPPSLIHDALGGALGDARDSL
NKHHATIRRNRVFEDAYEQFWPLGEGLKEPIQITFIDRFGVEEAGIDGGGVTKEFLTGVC
SDAFTPSKNLFLENEQHLLYPNPTSIEELKEELIKTRGPYQEVIGDEVKPLSKRYEFLGR
VLGKCLYEGILVDVAFAPFFLLKWSQQASDSRASMAIGVNDLRDLDEGLYRGLVKLKNYT
GDVESDFGLNFTISSRIPRHDKTITVELKPGGETIPVTNANKLEYVHLVSRYRLSVQAHI
QTSAFLKGLSSIINPSWLSMFNQSELQTLVGGDINTPIDVEDLRRNTIYGGVYQLGEDGI
EHESIRLFWEVMRSLGDEERRKVLKFVTSVARAPLLGFGVLRPRFSIRDAGEDQGRLCSA
STCVNLLKLPRYRDPRILREKLLYSVNSNAGFDLS
NT seq
3528 nt
NT seq
+upstream
nt +downstream
nt
atgtacccaacattcacgggctcgtcacgcaaacaccggattgttaacctttccggccgg
aagcctgccgctgctccatctcggacctcgcaattctcccgggctccagctacccaagca
tcagttcttcatgcccagcaggagcgagctcaacgtgaagccacgcgtcaacgcttaaga
gccgccactacggtgcaacgtgtttggaggggtcggagagaagccgaggcccagagggcg
atatggagaacagagtgggataatgttttcgcaggaggtgctggcggggatttcgcgcaa
gcgagtgattcgaaaaagcggattgagtacggggttacactatttcttgcattttacgaa
agagggcataggcccgggaggtggcggaagagagattcaggagactttctgagaatgaaa
gttctagttctcttcatggctcaatacttatctcaagcttccaacaggccatgcttaggg
gctagggcacgaggggtagatggtcacggaaccctaatgatggagaaatttgggaagctg
ctgatagaagtgcttcaggaggaggtgctgaccgctgattccctaagtgtgcttccttct
ttagcggtagaacttcccggaattgttgatgcatcatactacaaggccctttctcgaatc
accgcttcttccaagtcctcgcctgaagaaatcctagacgctgtattgactcctttacaa
catgtcggaaaggaaaatggacagaggaatgcagagatacatcgggactttgcggccaac
tacctcgtgacccccgacttgccggagcaccttcagcatagcggctttgagcgattaaag
aagaccgtaggatttgggaagctcattaaggccatgtctgaatccccggggcaatgggtt
gttgctacgggtgaagagaaattatggatgctatcctacataattcactttactcccagc
atgtccggcagcgaagtgattgacctcactggagataaaccattagtcagcaggggtttt
gaggagaagagctatactcatgtcatgtccctcctcctttcttcggttgctagggaggcg
agcaagagaatccaagtggtagatatatctatgggagttgaaggtgatgaggaagacgaa
gacgactcgagtggggagagaccccatcaaaacaaaaaccaaccattaccgccgtttgtc
aaatctaggcttgaaagcttgatccagcagccttccattacatccattttctcactcgca
ggtccccccagcagtgacgaccgcgatacaaaaatgctcgccggatttgcactgacccta
ctattggtattcccgaacgtgaaacaagaagtgtgtatgtggctctgtcttgctgaaact
aaggatggggtatctgtgttgagatatctatgggcagccgtcaggcgatcagagttgttc
ctgggagtcgccaaggatattcagttagccgtgagcagtctgagaaaacggaacttatcc
accgatggcccctctataagagattccgacaacggtgaatggaatttgattcttttgttc
attgaactctatggattcctgctgcttgttatggacgatgacgagttttttgcgcgcagc
agggcagagaaaaaggcccgtcagttaccgctagaggatgtagaaaatctaagcgtattt
ctcaagaacctggcctttgcgatgtattactggggaggggagataatgggagaggacaag
cagaggtccgatggaggagctgtctttttcaaagaccaaccaaatcaggtgtgggaggtt
gagtatttgaaaactgctgtgacaggactcttgaaggccatctatgctagagattcgaga
cgaaaattcctcccatccaaccactggcttatgaccgccgctggcttcaacatcgagggc
tttattcctgccgtcgtgcaggaagaggaaaatagacataagatggagagtgagggggaa
gatgacgaagaaccggaacgtcaatatgatcaagcagcagttgcggcgctaagtccgcac
gagcaacgaaatctgcaattggaatcgagggacaggacacagcgcaaaaggcagcgagct
ctctacttagcagccatcaccccgcgccttgagatacttcaaaatcttcccttctttatt
ccctttgctactagggtgcaagtattccgggaatttgtctcaggtgaccaacgtcggcgc
cgcgggggatttgttgacccggatcaatggagggctgccatgctctcgcagaactctcgg
ccaccctccctaatacacgatgcacttggcggtgcacttggcgatgcccgggatagcctt
aataaacatcatgcgacgattaggaggaatagggtgtttgaggacgcttacgaacagttc
tggcccttaggagagggcctcaaggagcctattcaaatcacttttatagatcgttttggt
gttgaggaagctggcattgacggtggtggtgtcacaaaggagtttttgactggcgtatgt
agtgacgcttttacaccaagcaagaatctatttctggagaatgagcagcatttgttgtac
cccaacccgacgagcatcgaggaactcaaggaggagcttattaagacaagaggcccctat
caagaggtgatcggggatgaagttaagccactatcgaaaaggtacgaatttcttggaaga
gtgctcgggaagtgtctttacgaaggaattcttgtggatgttgctttcgcccccttcttc
ctcctcaaatggagccaacaagcctcagattctagagctagcatggccattggtgtcaat
gacctccgagatcttgacgagggcctctaccgaggacttgtgaagcttaagaattacaca
ggcgatgtcgaatccgacttcgggcttaatttcaccattagttctcggattccaagacac
gacaagactatcacagtggaacttaaacctggtggggagacaattccagttacaaacgca
aacaagcttgaatacgtccacctcgtttcccgataccgactatccgtacaggcacatatc
caaacctcggcctttctgaaaggcttgagctcgattataaacccaagctggttatccatg
ttcaatcaatcagagctacaaactctagtaggtggggatatcaatacgccgattgatgtg
gaagatttgagaagaaatactatctatggaggtgtttaccaactcggcgaggatggtatt
gagcacgagagcatacggctgttctgggaggtcatgcgttcccttggcgatgaagaacgt
aggaaggtcttgaagtttgttactagtgttgctcgggcgccgctattaggtttcggagtt
ttgaggccaagatttagtatcagagatgcgggtgaagaccagggaagactttgtagtgct
agtacttgcgtgaaccttctcaagctcccccgttacagggatcccagaatccttcgagaa
aaactcctttactccgtcaattcaaacgcaggctttgacctgtcttga
DBGET
integrated database retrieval system
