Tuber melanosporum: GSTUM_00011472001
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Entry
GSTUM_00011472001 CDS
T01282
Name
(RefSeq) hypothetical protein
KO
K13126
polyadenylate-binding protein
Organism
tml
Tuber melanosporum
Pathway
tml03015
mRNA surveillance pathway
tml03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tml00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
GSTUM_00011472001
09123 Folding, sorting and degradation
03018 RNA degradation
GSTUM_00011472001
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tml03019
]
GSTUM_00011472001
03041 Spliceosome [BR:
tml03041
]
GSTUM_00011472001
Messenger RNA biogenesis [BR:
tml03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
GSTUM_00011472001
mRNA cycle factors
Stress granule specific factors
GSTUM_00011472001
Spliceosome [BR:
tml03041
]
Complex C
Other components
Complex C specific factors
GSTUM_00011472001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MLLE
PABC_AtC3H46
DUF6844
FAM192A_Fyv6_N
Motif
Other DBs
NCBI-GeneID:
9182812
NCBI-ProteinID:
XP_002841986
INRA:
GSTUM_00011472001
UniProt:
D5GNT4
LinkDB
All DBs
AA seq
335 aa
AA seq
DB search
MNQRMVNGKPLYVALAQRKDVRKSQLEASIQARNQIRIQQQAAAAGMQPAGFLSAQMYYG
PGQQAGFMPQSGRGLPFPQPSMMPMTSGPQGGPGGPGSRGPQAGNFVPNAGRPGPQGPIP
PGIPQQMYGPPAMGPGAGPGGPGFSPYPPNTLAAAQAQAVAASQGRGRGSVPPAGMAGIQ
QGIANMNMGPRGPVQPGRGGPRGNLPPQTQPGRPPAPPQIPHVSTSGIDPTLFAASPPQA
QKQLLGESLYPKIQRQHPELAGKITGMLLEMDNMELLALLDDEQALIAKVDEALSVYDEY
VKTRTGDDIGGHEGATTNDNENKGDEGKKEGEIKG
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
atgaaccagagaatggtaaatggcaaacctctctatgtcgctcttgctcagaggaaggat
gttaggaagagccaacttgaagcaagtattcaagctaggaatcagattaggatacaacag
caagctgcggccgccggtatgcaacccgctggatttcttagtgctcagatgtactatgga
ccaggccagcaagccgggtttatgcctcaaagtggccgtggtctcccatttcctcaacct
agtatgatgcctatgactagtggccctcagggtggtcctggtggtcctggtagtcgtggt
ccgcaagccggaaactttgttcctaacgctggccgccctggccctcagggtccaatccca
ccaggtatcccgcagcagatgtatggccctccagcaatgggccctggtgcaggacctggc
ggccccgggttttctccgtatccacctaatactctcgccgccgcccaggcgcaagctgtt
gcagcttctcaaggccgtggacgcggtagtgtgcctcctgctggaatggcaggaatacag
caggggatagctaatatgaacatgggccctcgtggtcctgttcaacccggtcgcggcggt
cctcggggcaatcttcctccccagacacagcccggtcgtcctcccgcccctccccagatt
ccacatgtatctaccagtggaattgatcccaccctatttgctgcctcgcctcctcaggcc
cagaagcaattgcttggcgaatctctctatcccaagatccagcgccagcaccctgagctt
gctggaaagatcaccgggatgttgttggagatggacaatatggagcttctcgcacttctt
gatgacgagcaagctctaatcgccaaggtcgacgaagctcttagtgtctatgacgagtac
gttaagactcgaaccggtgatgatatcgggggtcacgagggtgccacaactaatgataat
gagaacaagggtgatgagggcaaaaaagagggtgaaattaaaggttaa
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integrated database retrieval system
