Tuber melanosporum: GSTUM_00011594001 Help Entry GSTUM_00011594001 CDS       T01282                                  Name (RefSeq) hypothetical protein   KO K18995   ATP-dependent RNA helicase DHX29 [EC:5.6.2.6] Organism tml  Tuber melanosporum Brite KEGG Orthology (KO) [BR:tml00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03012 Translation factors [BR:tml03012]     GSTUM_00011594001 Enzymes [BR:tml01000]  5. Isomerases   5.6  Isomerases altering macromolecular conformation    5.6.2  Enzymes altering nucleic acid conformation     5.6.2.6  RNA 3'-5' helicase      GSTUM_00011594001 Translation factors [BR:tml03012]  Eukaryotic type   Initiation factors    Initiation associated factors     GSTUM_00011594001 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  OB_NTP_bind Helicase_C DEAD HA2_C AAA_22 DSRM_DHX29 nSTAND3 HA2_N NPHP3_N UBA_DHX29 ABC_tran Rad17 AAA_19 Tas3-like_N Motif Other DBs NCBI-GeneID:  9183529 NCBI-ProteinID:  XP_002842045 INRA:  GSTUM_00011594001 UniProt:  D5GNZ3 LinkDB All DBs AA seq 1488 aa AA seqDB search MGGKKKNKVASIPARGFVTTSVPSKTKTPAPVPEGPSEKETDTVVASGPSEKDSGKAGEI LGIPNEEEVEEHRLKALVDKLGQRARKETQRIVARVEVEKRTIRSICYPLKVNKLLEFDF VRYNSQPRTTGGVKELGVGDQILALAKEEFIQMGRTNETECKRGEALLLNAWILQRAFIS MGFPKGRVEEGLQALADHGSTALDKEKGLDGALEEMFDWLALNCEEEELPGFYDEFSRGK KDVASGSSDVTPSEIKPDSGTPTPRQPFGADKRHLTGKLLRVADRSLESRDVSGEDKKVG NNESGDSEDEDVEVAPEELVPQYIKLQTQKYHLHPASTIITGKKVKGKNEIKASSIAGVS PAKAEQLGKIQNKLDELTRDPLFDLREAEDVWRVERLRLEKEEWARKQSRGGSTFKQGTK ASAGYTVNSEGNGVKEETESTSPIDLPHTEEDSNIDQYFVDGLFKPTPTEELTAIQEGEN ENVDIRDFELVNASGGNFGKGKPRGKAGVGTPAVKKVLEELCRSRDVNSKIRFEMIPGTS ISARSKLIITWSSIAESSSVDVSPITPTLGPGARPPVIISTLGLLCTTFSMASIAAMSKD QADGFIATYALFKLCGKKDEKMYLRLPSIWRELWFELLNEGQLESERQEREVLRNLEGAL KIGNFGLSGPDYLAEKKPRAIKAVGPKEQGVTGGRVESGNTTSDAIKEDWFYRTSRSGYQ HMLEHRRKLPMWAFKEDVLAAMEKNQVIIICGETGCGKSTQTPAFILEHELSQGKSCRIY CTEPRRISAISLARRVSEELGERKSEVGSKSSLVGYAIRLEGRMHSGTRLIYATTACFFS FLLSPELEEVTHLVLDEVHERSIDSDFLLLVLKKLLVQRKDLRVVLMSATVDADRLSAYL GDAPVMVAPGRTFPVETYYLEDAIRLTQDTLSRLNLHHINYELIVRLIDFVGSSPEYVDY SKAILIFMPGFAEIRRLNDMLIAHPTFGNNRGDGGWLIYPLHSTIASEDQEAAFSIPPSG MRKIVIATNIAETGITIPDVTCVIDTGKHKEMRFDEKRQLSRLVETFVSRANAKQRRGRA GRVQKGLCFHLFTKSQHNNWMVEQQTPEIMRLSLQDLVLRIKICRLGQVEEVLSQALDAP LPKNIRRAIDSLLEVKALTVAEELTALGRQLAKLPLDVYLGKLVLMGSIYGCLDAALTIA AILSSKSPFVTPIGHKKEAESCRLSFKRADSDLLTGWNAYSSWRRVCQRKTMMSESEFCQ RNYLSSRNLLGIEELKQQLLVSVVEARFLTLKEEEKAELNRCRFSTYYRRNFFIVPESVN YSSENDSIVNSVIAASFYPKLLAKGGNGWRNILNNHRIAIHPSSVNRYAKSEWLAFHSIM QSNRSYDAHETSHVDGTAIALLCGDVDYKMHAGSMTLDGHRVRFAFEDWKSLIAFKILRS RLKEITTRSFRAPGKELTQNQRKWMQIFYRVFLRLKQIEDERVGGEAG NT seq 4467 nt NT seq  +upstreamnt  +downstreamnt atgggtggaaaaaagaaaaataaagttgcatctattcctgcacgcgggtttgttactaca tcagtgccatccaaaacgaaaacacctgccccagtccccgaaggtccaagtgaaaaagag accgacactgttgtggcatcggggccttcagagaaggactcgggaaaggccggtgagatt ctaggtatcccgaacgaagaagaggtggaggagcaccgattgaaggcacttgtggacaag ctaggtcaaagggccaggaaggaaacacagagaattgtggcccgggtggaagtcgagaaa cgcacaattagaagtatctgctaccctttgaaggtgaacaaacttctagagtttgacttc gtgcgttataatagtcagccaaggactactggtggagtgaaagaacttggggtaggggac cagattctggcgcttgctaaggaagagttcattcaaatgggccggacgaatgagaccgaa tgcaaacgaggagaagctttactcctgaatgcttggattctgcaaagggcttttatctcc atgggctttccaaagggaagggtcgaggaggggttgcaggcgctggctgatcatggttcc actgctctcgataaagaaaaaggcttagatggagcattggaggaaatgtttgattggcta gcgctcaattgcgaggaagaagagcttccggggttttatgatgagtttagtagagggaag aaagacgtggcctcgggctcatcagatgtgacacccagtgaaataaaacccgattctgga acacctactccccgacagcccttcggggccgacaaacgccatttgactggaaaattgctt cgagttgccgatcggagtcttgagagcagagatgtttcaggtgaggataagaaggttggg aataatgaaagtggtgacagcgaggatgaagatgtcgaggttgcgccggaggaattggtt ccacaatacatcaagctgcagacacaaaaatatcacctccaccctgcttctacaattata acaggcaagaaagttaaggggaaaaatgagataaaagcttcctcgatagctggtgtttct cccgccaaagcggagcaactcgggaaaattcagaataagcttgatgaacttacccgcgac ccgctctttgacctccgggaagcggaggatgtttggcgtgtagagaggctgaggctagaa aaggaggaatgggccaggaaacagagtagagggggttcgacctttaagcaagggactaaa gcatcggctggctatacggtcaactccgaaggcaacggggttaaggaagagacagagtct acttcccctatcgatttgccacatacagaagaggattcaaatatagatcagtactttgta gatggccttttcaaaccaacaccgacagaagaattaaccgctatacaagagggtgagaat gaaaatgtggatatcagagatttcgagctggtcaacgcttctgggggaaattttggaaaa gggaaaccaagaggaaaagcaggggttggtacgcctgcggtcaagaaggttttggaggag ctttgccggagccgggatgtgaattccaaaattcgcttcgaaatgattccgggaacatcg atttcggcccggagcaaactaatcattacttggtcttccattgccgaatcatcatctgtc gatgtttcccctataactccaacccttggccccggcgctcgcccacctgttattatatca accctgggcttgctttgtactacgttttccatggcatcaattgccgcgatgagtaaggac caagcggacggcttcattgctacttatgcgcttttcaagttatgtggtaaaaaggatgaa aagatgtatcttcggctcccaagcatttggcgtgagctgtggtttgaactactaaatgag ggtcaactagaatccgagaggcaggagcgggaggttctcaggaatctggagggggcttta aagataggaaatttcggcctttccggccctgattatcttgcagagaagaagcctcgggct attaaagctgttggccctaaggagcaaggagtcacgggcggaagagtggagtccggaaat acgacttcggatgcaataaaagaagattggttctatagaacaagtcgttctggatatcaa catatgttggaacatagaaggaagctgccaatgtgggcattcaaagaagatgttttggct gctatggaaaaaaatcaggtaattatcatatgtggtgaaactggatgtggaaagagtacc caaactcctgctttcattttagagcatgaactctcccagggaaaatcctgccgcatatac tgtacagagccacgtagaatttctgcaatatcgctcgcgagacgtgtatcggaagaactg ggtgaaaggaaatccgaagttggtagcaaaagttcgctcgttgggtacgctattaggctt gagggtagaatgcattctggtacaaggttgatctatgcgactacggcatgttttttctca ttccttctgtcgccggaattagaggaggtgactcatttagtgttggacgaggttcatgag agaagtatagacagtgactttctattacttgttctgaagaagctgttggttcaaagaaag gacctgagggttgttctcatgtctgccactgtcgatgcagataggctctcagcgtatctc ggcgatgcgccagttatggtggctccgggcaggactttccccgtggagacttactacctt gaggatgctatcagacttacccaggataccctaagtcgtctaaatcttcatcacatcaac tatgagttgattgttcggcttattgactttgttggaagctcacctgaatatgtggactac tctaaagcaatacttatattcatgcctggttttgccgaaattcgaagactaaacgacatg ttaatagcacatccgactttcggtaacaatcggggtgatggagggtggctgatatatcca cttcattccacaattgcaagcgaggatcaagaggcggctttttcaatacctccctcagga atgaggaagatcgttattgcaactaatattgcggaaacaggaataacaattccggatgtc acttgtgttattgatacagggaagcataaggaaatgcgattcgacgaaaaaaggcagctt agcaggctagttgagaccttcgtaagccgggctaatgcgaaacaaagaaggggtagagct ggaagagttcaaaaagggctatgttttcacctgtttaccaaaagccaacacaacaattgg atggttgagcagcaaactcctgaaattatgagactgtctcttcaggatctcgtgctgagg attaaaatttgtagacttggccaagtcgaagaggtcttgtcgcaagcccttgatgctcct ttacccaaaaatattagacgggctatagattctctacttgaagtgaaagcgttaacagtg gcagaagagcttactgccttagggcggcaacttgcaaagctgcctctggacgtttacctc gggaaattggtactaatgggctctatttatggatgcttggatgcggccctcaccattgca gctatcctatcctcgaagtctcccttcgttaccccaatagggcacaaaaaggaagccgaa tcctgcagattgtctttcaagagagctgactcagatcttctcactggctggaacgcgtac tcttcgtggaggcgagtttgccaaagaaaaacaatgatgtctgagagtgaattttgccag agaaactatctcagtagtcgaaatttacttgggattgaggaattgaaacagcagcttctt gtttctgtggtagaagctagattcctaaccctgaaagaggaagagaaggcagagctaaac cgatgccggttttcaacttactatcggcgcaacttcttcattgtcccagaatcagtcaac tacagtagcgaaaatgattccatagtgaattcagttattgctgcaagcttctaccctaaa ctattggctaagggaggtaatgggtggcgaaatattctcaacaaccatcgtattgccatc catccaagctcggtgaaccggtatgcaaagagcgagtggctggcgttccatagcattatg caatccaataggtcctacgatgcacatgagaccagtcatgtggacggcactgcaattgca ctactctgtggagatgttgactataagatgcatgcgggctcgatgacacttgatggacac cgggtaagatttgccttcgaggactggaaaagcttaattgcattcaaaatcctgcggagt aggcttaaggagatcacgactcggtccttccgtgcccccggaaaggagttgactcaaaac cagaggaaatggatgcagatattctatagggtatttctaagattaaaacagatagaggat gagagggtggggggtgaggcaggttag

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