KEGG   Tuber melanosporum: GSTUM_00011622001
Entry
GSTUM_00011622001 CDS       T01282                                 
Name
(RefSeq) hypothetical protein
  KO
K14829  pre-rRNA-processing protein IPI3
Organism
tml  Tuber melanosporum
Brite
KEGG Orthology (KO) [BR:tml00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:tml03009]
    GSTUM_00011622001
Ribosome biogenesis [BR:tml03009]
 Eukaryotic type
  Pre-60S particles
   5-FMC complex
    GSTUM_00011622001
SSDB
Motif
Pfam: WD40_Prp19 WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_EML_2 WD40 EIF3I WDR55 Beta-prop_TEP1_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_EML Beta-prop_SCAP Beta-prop_IFT140_1st NBCH_WD40 Beta-prop_WDR19_1st Beta-prop_LRRK2 WD40_RFWD3 WD40_MABP1-WDR62_2nd Beta-prop_WDR75_1st Beta-prop_RIG_2nd Beta-prop_HPS5 PQQ_2 WD40_MABP1-WDR62_1st Beta-prop_Vps41 Beta-prop_CAF1B_HIR1 Beta-prop_VPS8 Beta-prop_WDR11_2nd Beta-prop_IFT122_1st
Other DBs
NCBI-GeneID: 9183552
NCBI-ProteinID: XP_002842068
INRA: GSTUM_00011622001
UniProt: D5GP16
LinkDB
AA seq 474 aa
MLNEQVAISTFRPTPDISSTATAEPVISIYNLHTFSQTAAFKRSTTAKNCLAVTDSHLFA
AQSDKAVVNIYSREKGSLETTVPFKEKFTVLEAGSQEIIAGGTEDGRLLLWETATGRYIS
TQQAHLQRLTSIVFDCSSNFVITGSADSNVCVWSIPALLDIRTGERSPLYTLDRHTREIT
ALATGRVAAGGPSDILLTASRDQSVAAWDFHTGTHLRTYIFSSIPTCLAIDPADRAFYAG
LEDGGIQCVDFFNPADGVDDAASNQLFTREFRDVPVTLPEKRWFASGIDSVITALGVVFE
GNYVVSGNENGDVCVWDVATGHMFRSLVKLKASIASLKILPPIGFMPAHLEISEQKHQPT
SISKPRYDAIVSPSVADLYGYTVSTKFLTPSLPGVVTSPLASMQVSLSSSFSPENDLCTL
QQQADEMAAYRPALVSKHKIEALEAELRILYEQYDKLATLHNMTWEGIVKEALE
NT seq 1425 nt   +upstreamnt  +downstreamnt
atgctcaacgaacaggtggctatttcaactttccggccgacaccagacatctctagtact
gcaacagcagaacctgtgatttccatctacaatttacacacattctctcaaactgctgct
ttcaaacgatccacgaccgctaagaattgtcttgcagtaacagattcacatctgtttgct
gcgcaaagcgataaggcagttgtaaacatatacagtcgagagaaagggagtttagagacc
acagttccgttcaaagaaaaatttactgttctcgaggctggcagtcaggaaattattgcc
ggaggaactgaagatggaagactattgctttgggagactgctacgggacgatatatatct
actcaacaagctcacctccaaagacttaccagcatagtctttgattgctcttcgaacttt
gttatcactggctctgccgatagtaatgtgtgtgtttggtcgatacctgccctcctcgac
atacgaactggtgaacgctcgcctctttatactctggaccgacacactcgagagattact
gcgcttgctaccgggagagtggcagctggtgggccttccgatattctgctcactgcttcc
cgggatcaatctgtcgccgcctgggacttccacaccggcactcatctacgaacttacatc
ttctcttcaattccgacgtgccttgccattgatcccgcagaccgagcattctacgcgggg
ctagaagatggaggaatacaatgtgtggacttcttcaacccagctgatggagtggatgat
gctgcctcaaatcagctattcaccagagaatttagggacgtacccgttacactgcccgag
aagcggtggtttgcttctggcattgacagtgtcataaccgctctgggtgtagtttttgaa
ggaaactatgttgtttcagggaacgaaaacggtgatgtttgtgtctgggacgttgcgacg
ggccatatgtttcggagtcttgttaagcttaaagcaagtatcgcgagtctaaaaattctt
cctccaattggcttcatgcctgcgcacctagaaatttcagagcagaaacatcaaccaacc
agcatatcaaaacctcgctatgacgccattgtatcaccctcagttgccgacctttatgga
tacactgtctcgacaaaatttctcacgccctcgcttcccggggtagttacctctccatta
gcgtctatgcaagtcagcttgtcaagctcattttcaccggaaaatgacctgtgtacgcta
cagcaacaggcagatgagatggcggcttataggcccgcattggtgtcaaaacacaagatc
gaagcgctggaggccgagctgaggatcctgtatgaacaatatgacaagctggcaacactg
cataacatgacatgggagggcatagtgaaagaggccctagaataa

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