Tuber melanosporum: GSTUM_00011623001
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Entry
GSTUM_00011623001 CDS
T01282
Name
(RefSeq) hypothetical protein
KO
K14544
U3 small nucleolar RNA-associated protein 22
Organism
tml
Tuber melanosporum
Pathway
tml03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
tml00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
GSTUM_00011623001
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tml03009
]
GSTUM_00011623001
Ribosome biogenesis [BR:
tml03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
GSTUM_00011623001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nrap_D4
Nrap_D2
Nrap
Nrap_D5
Nrap_D3
Nrap_D6
DUF1359
Motif
Other DBs
NCBI-GeneID:
9183553
NCBI-ProteinID:
XP_002842069
INRA:
GSTUM_00011623001
UniProt:
D5GP17
LinkDB
All DBs
AA seq
1101 aa
AA seq
DB search
MAPATKKRRTEIEEGDEEVRAKETIGGLSSEEEMEAVSKEDDFGDRTFEAKSKPRKTPKH
SSSEQEKAQAISESYESKTNVFRMETEELLSEIRVDYRKRMAPAEKMLHKLKNIIEKIPR
KTGATIDKVEGEMRKCKIHIPFPEPRPGADIKYKFSYERPAYMNIAGSYALKTVAKQHEG
FAIDLIIQIPSTVFQEKDYLNYRYFHKRAYYLATIAEAIQDSGLDLQLSYVDLHDDPLRP
IIVAAPSGGSETDFTTSKCLIRIIPAIAKNTFSASRLRPDRNAVRPVAERDTAKNSLPPT
PRYNSSILADTTYFEHLAQLHDISSEAKVFKDACLLGRTWLRQRGFGSNINQGGFGHAEW
SILMSLLLKGGGSKGNSVLAKGYSNYQMFKAMLQFLATRDLIVNPLLFDVESECARWPNG
PNVFDGKIGLNILFKMTEWGYRLLKHEAEITLKLLSDPVMDHFEEVFLHRLDDPRFKFDA
LAYIPIPECLNKNNGLDPLLSFSQKLYDMLSTGLTDRAKLIHLTLPSISDLPVRADGINR
SPAPAAQIIVGLLLNAAQCNRAVDHGPPAGHKDGASYRVFWGDKAELRRFKDGSILESVV
WGTKDSKQSIYNQIIQYLVAKNFGDGIGNHIKFIGDEYTTAVGGGRDVSLFQPAMAAFEK
LIKELRNLEGLPLAIRQVSAAAPVLRYSSVEVPLLSSGQLMQPADVVVQFESSGRWPDDL
IAIQKTKTAFLLKMSELLEKAGTVTRIGLENIDYPTMNSAFLEVVYYEGSAFRIRIYHDR
EQTLLERQLLNKDLPGKKRDEVTAALSEHRRRFIVGPLHTQEVQKLSHRFPALSPSIRLL
KRWFQTHLLSREISEELAELMTIRTFVATSSPPNSVMSGFLRTLHFISLWDWRAEPAVIG
TVAKNASETFDAIRKSDPAINRHAMVIPTEYDPTGTTFTEFGPRKVVAARVTALARSAIG
ASFKNMFISSTKDYDFVMYIEPKYTLPGIRSKSSKFKNLQKTEITPQDIAKLGLNVPDTF
VDELNDIYGDTVIFFTDGNIIAGLWNPSSESGRRWKVNIPYSTIPQVRGNGEEVLVLNKK
SILNEISRLGGEILTKIEIIK
NT seq
3306 nt
NT seq
+upstream
nt +downstream
nt
atggcgcctgctacaaaaaaacgccgaaccgaaatagaggagggtgatgaagaagttagg
gccaaagagactatcggtgggctctcttcggaagaagaaatggaggctgtttctaaggag
gacgactttggagaccgaacctttgaggcgaaatcaaaaccacgaaagacccccaaacac
tcttcttccgagcaggaaaaagcgcaggctattagcgagagctatgaatccaagaccaac
gtgttccgaatggaaactgaggaattgctctctgaaatccgtgtggactatcgcaaaaga
atggcaccggcagagaagatgctgcacaagcttaagaatatcatcgaaaagatcccacgc
aaaacaggtgccactattgataaggttgagggggaaatgcgaaagtgcaaaatccatatt
ccattcccggagccgaggccaggagcagacatcaagtacaagttctcgtacgaaaggccg
gcatacatgaatatcgcgggaagctacgcgcttaagactgtcgcaaaacagcacgaaggc
tttgctattgacctaattattcagataccttcaaccgttttccaggagaaagactacctc
aactaccggtattttcacaagagggcttattatcttgctacaatcgcagaagctattcag
gactctggtttagatttacagctttcctatgttgatcttcacgatgaccctctaagacct
atcattgtagccgccccaagcggtggcagtgaaacagacttcacaacctcgaagtgcctc
atccgcattattcctgctattgccaagaacaccttctcagcctctaggctacgtcccgac
agaaatgccgtaagacccgttgctgagagagacacagccaaaaactcactcccaccaacc
cctcgatacaactcttcaattttggccgatacaacttacttcgagcatctcgcacaactg
catgacatctcctccgaagccaaggttttcaaagacgcttgcctgctgggtaggacatgg
cttaggcaacgtggatttggttccaacattaatcaaggaggatttggccatgctgaatgg
tcaatattgatgtcgctgctgctgaagggcggtggcagcaaagggaatagtgttctcgca
aaagggtacagcaactatcagatgttcaaggctatgctgcagtttttagccactcgtgat
ttaatcgtgaacccattactctttgacgtagagtcagagtgcgcgcgctggcccaatggg
cctaatgtgttcgatgggaagattggattgaacatattattcaaaatgacagagtgggga
tatcgtctgttaaaacatgaagcagagataacactaaagctcttaagtgatccagtaatg
gatcatttcgaagaagttttcttgcacaggcttgatgacccccgcttcaagttcgatgca
ttagcatatattccgattcctgaatgcctaaataaaaataatgggcttgatcccctactc
tcgttttctcaaaagctgtacgacatgttatctacgggccttaccgacagggcaaagctc
attcatttgacccttccttctatttcagatctaccggttagagctgatggaatcaaccgc
agtcctgcaccggctgcacaaataattgttggcctcctgctcaatgcagcacaatgcaac
cgtgctgttgatcatgggcccccagccggccacaaggatggtgcctcatatcgcgtgttt
tggggggataaggctgaactccgtcgtttcaaggatggaagcatacttgagagtgtagtg
tggggcaccaaggattcgaaacaatctatatataatcaaatcattcaatacctggtagcc
aaaaacttcggtgacggaataggcaatcacatcaaatttattggggacgaatacacgacc
gcggttggaggggggagggatgttagcttatttcaacccgccatggcagctttcgagaaa
ctcatcaaagaactcaggaatcttgaagggcttccattagccatccggcaggtttctgct
gcggcaccagtattgcgatattcgagtgtggaagtgccactcctctcatctggtcagcta
atgcagcccgcagacgtggttgttcagttcgaaagttccggccgatggcctgacgatctg
attgccatccaaaaaaccaagaccgcattcctccttaagatgtctgagcttctagaaaag
gctggcactgtcactcgcattgggctagaaaacatcgactatccaacaatgaactcggca
tttctggaggttgtctattacgaaggttcagcattccggattcggatctatcatgatcgt
gagcaaacccttctggagcgacagctcttgaacaaagatcttccaggtaagaaacgggat
gaggtcactgcggcactttcagaacatcgcagaaggtttattgtcggcccacttcacact
caggaagtgcagaagttgtctcatcgcttcccagccctctcacctagtatccgtctgctc
aaaagatggtttcaaacacatctcttgtcaagagagatttcggaggagctcgctgaacta
atgaccatccgtacattcgttgctacttcctctccaccgaatagtgttatgagtggattt
ctccgaacactacacttcatttctctatgggactggcgcgctgagccggctgtcattggt
acagtcgctaaaaacgcctccgaaaccttcgacgccattcgaaaatccgatcctgccata
aacagacatgctatggttatccctaccgagtatgaccctacgggaactactttcacagaa
tttggtccgagaaaagttgttgcagcaagggtcacagcgttagcaaggtctgccattggt
gctagttttaagaatatgtttatctcttcaacaaaagactacgacttcgtgatgtatatc
gaacccaaatacactctacctggtatccgctcaaaaagttcaaaattcaaaaacctacag
aagaccgaaatcactcctcaagatattgccaagttaggcctaaacgttcccgacaccttt
gtcgatgagcttaatgatatttatggagataccgtcatctttttcacggacggaaatata
atagctgggctctggaatccctcatctgaaagtggaaggagatggaaagttaacatccca
tattctacaattccacaggtgaggggaaatggcgaggaggttttggtgctgaacaagaag
tctatattaaatgagatttcaagacttgggggagagatccttacgaaaattgaaatcatt
aagtag
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integrated database retrieval system