Tuber melanosporum: GSTUM_00011744001
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Entry
GSTUM_00011744001 CDS
T01282
Name
(RefSeq) hypothetical protein
KO
K10591
E3 ubiquitin-protein ligase NEDD4 [EC:
2.3.2.26
]
Organism
tml
Tuber melanosporum
Pathway
tml04011
MAPK signaling pathway - yeast
tml04120
Ubiquitin mediated proteolysis
tml04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
tml00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
GSTUM_00011744001
09130 Environmental Information Processing
09132 Signal transduction
04011 MAPK signaling pathway - yeast
GSTUM_00011744001
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
GSTUM_00011744001
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tml04131
]
GSTUM_00011744001
04121 Ubiquitin system [BR:
tml04121
]
GSTUM_00011744001
03029 Mitochondrial biogenesis [BR:
tml03029
]
GSTUM_00011744001
Enzymes [BR:
tml01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
GSTUM_00011744001
Membrane trafficking [BR:
tml04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
GSTUM_00011744001
Ubiquitin system [BR:
tml04121
]
Ubiquitin ligases (E3)
HECT type E3
GSTUM_00011744001
Mitochondrial biogenesis [BR:
tml03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Morphogenesis factors
GSTUM_00011744001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HECT
WW
C2
Motif
Other DBs
NCBI-GeneID:
9186584
NCBI-ProteinID:
XP_002842153
INRA:
GSTUM_00011744001
UniProt:
D5GP79
LinkDB
All DBs
AA seq
739 aa
AA seq
DB search
MTEGPASPRQVRITVIAADGLYKRDVFKFPDPFAVVTVDGEQTHTTSVIRKTLNPYWNES
FDLQVSEASIVAVQIFDQKKFKKKDQGFLGVINLRVGDVLDISSGGDEMLTRDLKKSNEN
VIVHGKLIVSLTTNIHTPIRTPGQIQSHRPTLPVPTGGNGGQASPAAPPNNPHSSTNGTG
RHAHNMSSFEDNQGRLPAGWERRQDNLGRTYYVDHNTRTTTWNRPSTTYNESDQRVAMQQ
NTEAERQRHQNPASMMATGATTAGTGELPPGWEQRHTPEGRPYYVDHNTRATTWVDPRRQ
QYIRMYGSNTGTPSIQNLPVSQLGPLPSGWEMRLTNTARVYFVDHNTKTTTWDDPRLPSS
LDQNVPQYKRDFRRKLIYFRSQPALRILSGQCHVKVRRNHIFEDSYAEIMRQTPNDLKKR
LMVKFDGEDGLDYGGLSREFFFLLSHEMFNPFYCLFEYSAHDNYTLQINPHSGINPEHLN
YFKFIGRVVGLAIFHRRFLDAFFIGAFYKMILKKKVVLADMEGVDADFHRNLTWMLENDI
TDILDLTFSTEDSRFGETVTIDLKPNGQNIEVTNDNKREYVDLVTGWRIEKRVQEQFKAF
VDGFHDLIPADLINVFDERELELLIGGIADIDVEDWKKHTDYRGYTESDDCVRSWDAEQK
SRLLQFTTGTSRIPVNGFKDLQGSDGPRRFTIEKAGDIGQLPKSHTCFNRLDLPPYKSFD
VLNQKLSLAVEETMGFGQE
NT seq
2220 nt
NT seq
+upstream
nt +downstream
nt
atgacagaaggacctgcgagtccgcgccaggttcgaatcacagttatcgctgcggatggg
ctttataagagagatgtctttaagttcccggacccatttgctgtcgtcactgttgatgga
gagcagactcatacaacttcggtgatacgcaaaacattaaatccctattggaacgagtcg
tttgatttacaagtctcggaagcgtccatcgtagcggtgcagatatttgaccagaagaag
ttcaagaagaaagatcagggattccttggtgttatcaatcttcgagtgggcgatgtgctt
gacatctcttcaggcggtgatgaaatgcttacgagagatttgaagaaatcgaatgagaac
gtgatagttcatggtaaacttatcgtaagcctgaccacgaacatccatacacctattcga
acgcctggccaaatccaatctcatcgaccaacactgcctgtacctactgggggcaacgga
ggacaggcgtctcctgcggcgccgccgaacaatccacattcctcaacgaacggtacaggg
cgtcacgcacacaacatgagttcatttgaggataaccaaggaaggttacctgctggttgg
gagagacgtcaagataatctgggtaggacatattacgtggaccacaacacccgtactacg
acctggaacagaccttcaactacttataatgaaagcgaccagcgggttgctatgcagcaa
aacaccgaggccgagagacagaggcatcaaaacccggcatcgatgatggcaacgggtgct
acaacggctggaactggtgaacttccccccggctgggaacaaaggcatactccggagggc
aggccgtactatgtggatcacaatactcgtgcaacaacgtgggtagacccaaggaggcaa
caatacattcgcatgtacggaagtaatacaggcacgccaagcattcaaaaccttcccgtt
tcgcagctgggccccctacccagcggatgggaaatgagattgaccaacaccgcgcgggtg
tatttcgtggatcacaatactaaaacgacaacttgggatgacccacggcttccatcgtca
cttgatcagaacgttccccagtacaagcgcgattttaggagaaagcttatttacttccgc
tcacagcctgcgcttcgtatcctctctggccagtgtcatgttaaagttcgtaggaaccac
attttcgaggactcatatgcggagatcatgcgacagacgcccaatgacctcaagaagcgg
ctcatggtcaagtttgatggtgaagatggtttggattatggcgggttatcgagagagttc
ttcttcttgctctcacacgaaatgttcaaccctttctattgcctgtttgagtattctgcc
catgacaattacaccctccaaataaaccctcactccggaatcaacccggaacaccttaac
tacttcaagtttattgggcgagtggttggtttggcgattttccatcgacgcttccttgat
gcattctttatcggcgcattttataagatgatactgaaaaagaaggtcgtcttggccgat
atggaaggtgttgacgccgatttccacaggaacttgacctggatgttggagaacgacatc
accgacatcttggatctcaccttctcaacagaagatagcagatttggtgagaccgtgacc
atcgacttgaagcctaacggccaaaatatcgaagtcacaaatgataacaagagggaatat
gttgaccttgtcaccggttggcgtattgagaagcgagtgcaggagcagttcaaagccttt
gtcgacggtttccacgaccttataccagctgatttgataaacgttttcgatgagcgggag
ctggagttgttgattggaggtattgccgatatcgatgttgaagactggaagaaacacacg
gactacagaggatacacagagagcgatgactgtgtccggagttgggatgctgaacagaaa
tcgagattgctccagttcaccactggtacctcacgtattccagtcaacggtttcaaggat
ttgcagggtagtgatggaccccgtcgttttacgattgagaaagcgggtgacattggtcag
ctaccaaaatcccacacatgtttcaaccgattagacctccctccgtataagagctttgat
gttctaaatcaaaagttatcgttggcggtggaagagactatgggatttgggcaagaatag
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integrated database retrieval system