Tuber melanosporum: GSTUM_00011843001
Help
Entry
GSTUM_00011843001 CDS
T01282
Name
(RefSeq) hypothetical protein
KO
K22611
squamous cell carcinoma antigen recognized by T-cells 3
Organism
tml
Tuber melanosporum
Brite
KEGG Orthology (KO) [BR:
tml00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tml03041
]
GSTUM_00011843001
03036 Chromosome and associated proteins [BR:
tml03036
]
GSTUM_00011843001
Spliceosome [BR:
tml03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
GSTUM_00011843001
Chromosome and associated proteins [BR:
tml03036
]
Eukaryotic type
Histone modification proteins
Other histone modification proteins
GSTUM_00011843001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
Suf
Nup35_RRM_2
HAT_PRP39_N
HAT_PRP39_C
HAT_Syf1_CNRKL1_N
RRM_PARP14_3
NRDE-2
Lsm_interact
Motif
Other DBs
NCBI-GeneID:
9186654
NCBI-ProteinID:
XP_002842223
INRA:
GSTUM_00011843001
UniProt:
D5GPH1
LinkDB
All DBs
AA seq
1133 aa
AA seq
DB search
MTGGDDDDAAAAVAVGDGIGVVYEAVMEDASDGDENEVVVSVPLSEEDYTRIADLLVSIT
NRPYQYESHVEYISLLRRGFLAHRADPRELGPYPLIKDLRKAREDMIERFPLNETMWAEW
IADEISICGGLEERLGVMELCAKAVEEESASVKLWKTYAEYIESQYSLGRGGDAAGKGKA
KKLLSEEEEVTLKGCFTLELVVETYRLGSLATKDNVAESHALWNKYRDLMVMDLEANPTP
PKVEFIRNLYIARLQIPHTTISDTFSEFSTFITRYDNANYESIMVSTNKLYAVALAKYNE
RSRYEDRLPKHGQVSLAEEWNAWAEYLEWETSRPKKKLDVDMACALYERCLLCFGEQARV
WEEYVFFALEKSLGPRVKALLKRATRHCPWSGTLWAQYIIALERAYRPFEEVSEIKHRAT
TTGMLDLGGLEEVLKVNIAWCGFLKRRAFEHDAGEDDFDMAEMGISEAVTETGKKDPEYR
LQRIHINFCTLAKKIDAAREIWKELAKTHGNSYEYWLRYYHWELSHGPGDKDYAGSALKA
ALGRNTLDWPEKILETWKNHVEDFGNVEDVEYVTVRYRKLSKEILERRAQEAQVAALQQQ
TVKDQQPEADTPQTDESARASSKRRRSVTEADDSQPKKKSKAAETLAPEQPAAHSPSPKS
SVAKRDRENTTVIVKNLPPNYPEVRVRQFFRDCGTINSLKLIVEKDGKTSTATVEFESRE
DVLTAQTKNLKIVDGHSIEVQVGTGSTLYVTNFPPTADETCIRDLFKDCGEIVDIRFPSL
KYNSHRRFCYVQFASSDEAQKATSLHGKQLGGKETLVAKISAPDQKHERSGAVYEGREVY
IRNIDFQAHDNDVQELFQKYGRIEKVRLPPGPKKGTHKGYGFVTFSAKEEALAAVEGANN
TQLKYRTLIISIADPNPSKQKTTNANPSTEKMRDSASDRNTDRPRQKSAYPAASQQPPAP
AFSDIKQKTLGIMNLSDTVNDTKIRHMFEKYGPLRKVALRPDHQGAIVEYESVTDAGKAT
LALDGLELAGRKIKIGGLADLMRQSPERKVSKGFATNNGGGKVGVVAFKPSQVGAGGMKG
QKRRAGLGFSGVVKKKDADGKKNEDIVMADGPPAREAPKTKSNADFKAMFLRK
NT seq
3402 nt
NT seq
+upstream
nt +downstream
nt
atgactggcggggacgatgatgatgctgctgctgctgtcgctgttggcgatggcattggc
gtggtgtatgaagccgttatggaagatgcatctgatggtgacgaaaacgaggttgtagta
tcggtgcctttgtcggaggaggattacacgcgcatcgccgaccttttggtttccatcacc
aaccggccgtatcagtatgaatcccatgtggagtatatttccctcctgcgtcgcggcttc
ctcgcacaccgggccgacccgagagagttggggccgtaccccctcatcaaggacctgcgg
aaggctcgtgaagacatgatcgagaggtttccactgaacgagactatgtgggctgagtgg
attgccgatgagatatctatttgtggtggtctcgaggagcgtcttggtgtcatggagctt
tgtgctaaggctgtcgaggaggagtccgcaagtgtcaagctgtggaagacttatgctgaa
tatatcgaatcccagtattctctggggaggggtggggacgcggccgggaaaggtaaggct
aagaagcttctcagtgaggaagaggaggttactttgaaagggtgttttacgttggaattg
gttgttgagacttatcggctgggttctcttgctaccaaggataatgttgctgagagccat
gcgctttggaataagtatcgcgacttgatggtgatggacttggaagctaacccaactccc
cccaaggtcgaatttattcgaaacctctatatcgctcgtctccaaatcccacacaccacc
atcagtgataccttctctgaatttagcaccttcattactagatatgacaacgcaaattac
gaatctatcatggttagcactaacaagctttatgctgtagctttggcaaagtacaatgag
cgttccagatatgaggaccgcctccccaagcacgggcaggtctccttagcggaagaatgg
aatgcttgggcagaatacctagaatgggaaacctcccggccgaagaagaaactcgacgta
gacatggcatgcgcgctctatgagcggtgcttactgtgcttcggcgagcaggccagagtt
tgggaagaatatgtcttttttgctcttgagaagtcactgggccctcgtgttaaggcactt
ttgaagcgtgccacgagacattgtccatggtccgggacgctatgggcccagtacataatt
gctttggagagggcgtataggccatttgaagaggtttctgaaatcaaacacagggctacc
actactgggatgttggacttgggcggtttagaggaggttttgaaagttaacattgcctgg
tgtgggttcttgaagagaagagcttttgaacatgacgctggggaggatgatttcgatatg
gcagagatggggatatctgaagctgttactgaaactggcaaaaaggatcccgagtatcgt
cttcaaaggattcatatcaacttctgtactcttgctaagaagattgacgccgcaagggag
atctggaaggagcttgccaagactcatggcaattcttatgaatactggttacgttactat
cactgggagctttcacatgggccaggggataaagattatgcaggctcggctttaaaagca
gctctggggagaaataccttagattggcctgagaagattctggagacatggaaaaaccat
gttgaagactttggaaacgtcgaggacgtcgagtacgtgactgtccggtatcggaagctt
tccaaagagattttggagaggcgagcgcaggaggcacaagtagctgctctacagcagcaa
acagtgaaggatcagcaaccagaggcagatacaccgcagactgatgaatcagctagggcc
agttccaagaggcgtcgaagtgttactgaggctgatgattctcagcccaaaaagaaatcc
aaagctgctgagacactggccccggagcagccagctgcccactcgccttctccaaagtct
tccgtagcgaagcgtgatcgcgagaataccaccgtgatcgtgaagaacctgccgccgaat
tatccggaggtgcgggttagacagtttttcagagattgcggtacgatcaatagtttaaag
cttattgtggagaaggatggaaagacttcaactgcaactgttgagtttgagagcagggaa
gatgtcctcacagctcagactaaaaacttgaagattgttgatgggcactctatcgaggtt
caggttgggactgggtcaactctttacgttacaaatttcccgccgaccgccgatgagacg
tgtatcagggatctgttcaaagattgtggcgagatcgtcgacatccgctttccaagtctg
aagtacaactcgcatcggcggttttgctatgtccagtttgcgtcatctgatgaagctcag
aaggcgacctccctgcatggtaaacaacttggaggcaaggaaactcttgtggctaagatc
tcggcgcctgaccagaagcacgagcggtctggtgcagtatatgagggccgagaagtgtat
atccggaatatagattttcaggcacacgataatgacgtccaggaattattccagaaatat
gggagaatagagaaggtccgtctgccgcccgggccgaagaagggtactcacaaaggctat
gggtttgtgactttttccgcaaaggaggaagccctcgcagcagtagaaggcgcgaacaat
acccagctcaaataccgaacgctcataatcagcattgcagacccaaaccccagcaagcaa
aaaaccaccaatgccaacccctccacagagaaaatgagagattcagcttctgaccgaaat
acggaccgcccccgccaaaaatcggcataccctgctgcttcacaacagccgccggcccct
gccttctctgacatcaagcaaaaaacgctcggaataatgaacctctccgacaccgtaaac
gacaccaaaattcgccacatgtttgaaaagtatggtccgctgcgcaaggtcgccctgaga
cccgaccaccaaggcgcaatcgtagaatacgagtccgtcaccgacgccggaaaagctacc
ctagcactcgacggactcgagctcgccggccgcaaaatcaagattgggggattagcggac
ttgatgcggcagtcccctgagaggaaagtttccaaaggatttgctaccaacaacgggggt
ggaaaggtcggagtggttgcgtttaagcccagtcaggtgggcgcgggagggatgaagggg
cagaagcgaagagctggcttgggcttttcaggtgtggtcaaaaagaaggacgctgatggg
aagaagaatgaagatatagtgatggcggatggaccgccggccagggaggcgccaaagaca
aagtcgaatgctgattttaaggccatgtttttgcggaagtag
DBGET
integrated database retrieval system
