Tuber melanosporum: GSTUM_00011985001
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Entry
GSTUM_00011985001 CDS
T01282
Name
(RefSeq) hypothetical protein
KO
K13174
THO complex subunit 5
Organism
tml
Tuber melanosporum
Pathway
tml03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
tml00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
GSTUM_00011985001
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tml03019
]
GSTUM_00011985001
03041 Spliceosome [BR:
tml03041
]
GSTUM_00011985001
Messenger RNA biogenesis [BR:
tml03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
GSTUM_00011985001
Spliceosome [BR:
tml03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
GSTUM_00011985001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FmiP_Thoc5
TSC22
KIF21A
Microvir_H
FapA
Motif
Other DBs
NCBI-GeneID:
9183569
NCBI-ProteinID:
XP_002842315
INRA:
GSTUM_00011985001
UniProt:
D5GPR3
LinkDB
All DBs
AA seq
224 aa
AA seq
DB search
MTIQEIITDPALRECLAVADRTRLLCHQILTMIEATQGIELPEDKRIERSRTQKQLNALL
TQIKGLHRAAIMSAREAKEVTSEVRREVDRLHLQLQNLYYEQRHLRGEITACREFPHQYT
SLPLVSEEEFLALNPEHQNDNPHNLMIARLNNEKAVREELEKQRKELLAKKQALIAENKR
RKDDLASLDEQLKKFIIEANSKYFPEGVLAIHLNTSLTHFNSIR
NT seq
675 nt
NT seq
+upstream
nt +downstream
nt
atgaccatccaagaaatcatcacagaccctgccctccgggagtgtcttgctgtggcggac
cgtacacgcctcctctgccaccaaattctcacaatgattgaagctacacaaggcatagag
ctccctgaagataagaggattgaacgatcacgcactcagaagcaactcaatgcattgttg
acccaaatcaaggggctacatcgagcggcaattatgtctgctcgtgaggccaaagaagtt
actagcgaagtccgccgggaggtcgatcgtcttcatctacagcttcagaatctctactac
gaacaacgccatcttcgcggtgagattactgcctgtagagaatttccacatcagtacaca
tctctgcctttagtctccgaggaagaattcttggctctgaatcccgaacaccagaatgat
aacccacacaatctgatgattgcgcgactaaacaacgagaaagctgtacgtgaggagtta
gaaaaacagagaaaagagcttctggccaagaagcaagcgcttattgcggagaacaagagg
cgtaaggacgacctcgcaagcttagatgagcaactaaagaaattcatcatcgaagccaat
tcaaaatactttccagaaggagtactagccattcatctcaatacatcgctcacacatttt
aattcgatccgttga
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