KEGG   Tuber melanosporum: GSTUM_00012213001
Entry
GSTUM_00012213001 CDS       T01282                                 
Name
(RefSeq) hypothetical protein
  KO
K10848  DNA excision repair protein ERCC-4 [EC:3.1.-.-]
Organism
tml  Tuber melanosporum
Pathway
tml03420  Nucleotide excision repair
tml03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:tml00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    GSTUM_00012213001
   03460 Fanconi anemia pathway
    GSTUM_00012213001
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:tml03032]
    GSTUM_00012213001
   03400 DNA repair and recombination proteins [BR:tml03400]
    GSTUM_00012213001
DNA replication proteins [BR:tml03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Other termination factors
    GSTUM_00012213001
DNA repair and recombination proteins [BR:tml03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     GSTUM_00012213001
SSDB
Motif
Pfam: ERCC4 HHH_5
Other DBs
NCBI-GeneID: 9185234
NCBI-ProteinID: XP_002842463
INRA: GSTUM_00012213001
UniProt: D5GQ61
LinkDB
AA seq 902 aa
MSTPTSSQPKVSLSLAYQQDLFEEVCEQDQLVILARGLGLLHIVTSLLHKYDAVGNNLVL
LIGADDRENGWLGEALAEHAVRSGTPEARGLKIINTEVASVSARAEMYKQGGIFSVTSRI
LVTDMLTDLMDCPKISGVVVLHSERVIATSTEAFILRIYRQKNQEGFLKAFSDNPEPFTT
GFAPLATMMRNLFLRSPSLWPRFHVTVARSLETKKAEVVELEVAMTDSMREIQTAVLECI
ETSISELRKSNSSLELDDWTVDSALHKSFDVVVRRQLDPVWHRISWKTKQIVNDLTVLRR
ILHCLLTYDCVTFYQYLETILATHAPPPGSTRSSQSPWLFLDAAHTIFTLAKRRVYTGKA
DLSKKASGKVPHGLEPVLEELPKWDMLAEVLDEIEKDGYFNPAFSQSSRSTLIMCSDEST
CRQIREFLQTMHETPLEDLINQDDELEGKPNRASAAYMMRRKLRAYFAWKPDFAKLTPPP
NKRRRVRGGAAAAASGPNRQNAGAVQVTEEQSAQVAALLAGVQPTEGEQNLKQEIGVDSF
ENMEDYYEFYEMGDLTVVHPYDGDMDERLLGELHPRYVIMYEPDPAFIRRVEVYRSSHKD
REVRVYFLYYGKSVEEQRYLSAVRREKDSFTKLVHEKGSMSVTLTLDAKAIEDPQEAFLR
TVNTRIAGGGRITATAVPPRVIVDIREFRSSLPSLLHGRNVEVVPCTLTVGDYILSPDIC
VERKSVKDLISSFKDGRLYTQCENMLLYYKNPMVLIEFDQNKSFNLEPFADLTGSISQHD
LQAKLVLLTIAFPKVKLIWSSSPYQTAEIFEELKRNQGEPDPLEAIKLGLEPGEEIAGVY
NQTPQEILRSIPGINPKNIKTVMSEVENLVELSNMEEKDISDLIGKEAGKQVYEFFNRSA
FS
NT seq 2709 nt   +upstreamnt  +downstreamnt
atgtctactccaacctcgtcacaacctaaagtctccctttcacttgcttaccaacaggat
ctatttgaagaagtctgcgagcaggaccagcttgtcatccttgctagaggtctcggcctg
ttacacatcgtcacaagtctgctacataaatatgacgcggttgggaacaaccttgtgttg
ttgattggtgcagatgatagagagaatggatggctcggagaagctctcgctgaacatgcg
gtaagatcgggaaccccggaggcgaggggcttaaaaattataaataccgaagttgcaagt
gtttctgcgagagcggagatgtacaagcagggcggcatattctcggtcacctcaagaatt
ctggtaacggatatgctgacggatttgatggactgcccgaagatatctggagtggtagtc
cttcattctgaaagggtcattgcgacttctaccgaagctttcattcttcgaatatacagg
cagaagaatcaagaagggtttctcaaagctttctcagataatccagagcctttcacaact
ggtttcgcccctttagctactatgatgcggaacttattcttgcgatcaccctcactatgg
ccgaggttccatgtaacggttgcgagatcgttggaaactaagaaggcggaggtggtagag
cttgaggtcgcaatgactgactcaatgcgagaaattcagactgcggttttggagtgcatt
gagacttcaattagcgagctgaggaagtcgaacagttctctcgagctggacgactggact
gttgatagtgcgctccataaatcttttgatgttgttgtacggcggcagttagatcccgta
tggcatcggattagctggaagactaaacagatcgtcaatgacttgaccgttctcaggagg
atactacactgtcttttgacatacgactgtgtgactttttaccagtatttggaaacaatt
ctcgccacgcatgcgcctccaccaggctcgacccgctcgtctcaatcgccttggctgttc
cttgacgctgcacatacgatattcactcttgcaaaacggagagtttacacggggaaagca
gacctaagtaagaaggcctcagggaaagtaccgcacgggcttgagccggtattggaggag
cttccaaaatgggacatgcttgcagaggtgcttgacgaaatcgaaaaagatggctatttt
aatccggcatttagccagtcttccagaagcacactgataatgtgtagtgacgaaagtacc
tgtagacagatacgcgagttccttcaaactatgcatgagacacccttggaagaccttata
aaccaggatgacgagctggaggggaaacccaaccgagcttctgcagcgtatatgatgcgg
cggaagctgcgagcatattttgcttggaagccagattttgcaaagcttactccgccacca
aacaaacgacgaagagttcgtggaggtgcagcagcagcagctagtgggccgaatcgtcaa
aatgcgggggcggttcaggtaacagaagagcaatctgcacaggtggccgctttgcttgcc
ggtgttcagccgacggaaggagagcagaatttgaagcaggaaatcggagtagattccttt
gagaacatggaagactattatgagttttatgaaatgggcgatctcactgtggtccacccc
tatgatggggatatggatgagcgtttgttgggtgagcttcatcctagatacgttatcatg
tacgagcccgatcccgctttcatccggagggtagaggtctaccgtagttcacacaaagac
cgggaggttagggtatacttcctctactacggtaagtccgtggaagagcaaagatatttg
agcgctgtacggagagaaaaggattcgttcaccaagttggtccacgaaaaaggaagcatg
agtgtcaccctcaccttggatgcgaaagccatcgaggacccacaggaggctttccttagg
acagtaaacactaggatagctgggggcggccgcataacggcgactgctgttcctccaagg
gtaattgtcgatatacgagagtttcgtagttcgctaccatctctattgcacgggagaaat
gttgaggtcgttccttgcactttgactgtcggcgattacattctctctccggacatatgc
gttgaaagaaagtcggtcaaggatttaatatcttcatttaaggatgggaggctttacacc
cagtgcgagaacatgctactatattacaagaaccccatggtgctcattgagtttgaccaa
aataaatcattcaacctggagccctttgcggatctcacgggaagtatcagccagcatgat
ctccaggcaaaactagtgctactaactatagccttccccaaagttaaactaatctggtcc
tcaagtccctaccaaacagcggagatctttgaggaattgaagagaaatcaaggggagcca
gacccactagaagcgatcaaacttggtctagagcccggcgaagaaatcgctggcgtctac
aaccaaacaccccaggaaatcctgcgatcaatacccgggatcaaccctaagaatatcaaa
accgtcatgtcagaggtggagaacctggtcgagctcagtaatatggaggagaaagatata
tctgatttgatcggaaaagaggccggaaagcaggtttacgagtttttcaataggtcagcg
ttttcttga

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