Thermotoga maritima MSB8: Tmari_0456
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Entry
Tmari_0456 CDS
T02663
Name
(GenBank) DNA-directed RNA polymerase beta subunit
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
tmm
Thermotoga maritima MSB8
Pathway
tmm03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
tmm00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Tmari_0456
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tmm03021
]
Tmari_0456
03400 DNA repair and recombination proteins [BR:
tmm03400
]
Tmari_0456
Enzymes [BR:
tmm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Tmari_0456
Transcription machinery [BR:
tmm03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
Tmari_0456
DNA repair and recombination proteins [BR:
tmm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
Tmari_0456
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
RnfC_N
Apocytochr_F_C
Peptidase_M23
RPOC_hybrid
Biotin_lipoyl_2
Motif
Other DBs
NCBI-ProteinID:
AGL49381
LinkDB
All DBs
Position
482212..487278
Genome browser
AA seq
1688 aa
AA seq
DB search
MSSFKRKIKAIQIKIASPEVIRSWSGGEVKKPETINYRTFKPERDGLFCERIFGPVKDYE
CACGKYKGKKYEGTVCERCGVRVESREARRKRMGHIELAAPAVHIWYLESIPSVLGTLLN
MSTSDLENIIYYGSRRVIERAFIVTDPKDTPFSQGDVIYETEYRIYRKKWDFDVEQAFVV
KNPKSPVLSDIDGEVTLKTEKSITGREITWIIVKNITRATHTVLPGMILVVKDGQEVEKG
QDLTKEMTIDPVYAPFDGHVEIDELSNTITLKPLTTSKDQPVVFTIPYGAKILVSNGQKV
KKGDQITTSTSLPAVKASISGTVRFGSNLNIRALEDGNFEVLSTGEVYVEQVIEERKYPV
FEGALVYVNNGDQVKKGDHLADRFLFEEEYLSATEYKIFESHYPTMFDVEERTENDRPIV
VITDIDPEVSKETGLKVGDIVTENEYEAYLQIYPEKIVADAGAQAIKKLLQNLDLEALQA
EIEAELKKLPSSSSKAIKLRRRLKMVKDFLKSGNKPEWMVLEVVPVIPPDLRPMIQIEGG
RFATTDLNELYRRLINRNNRLKKLLELGAPEIILRNEKRMLQEAVDALIHNGSDSEGKRS
RRAVLKDRNGRPLKSLTDLLKGKKGRFRRNLLGKRVDYSGRAVIVVGPNLKIHQCGIPKK
MAMELFKPFVLAKLLGEGSSSKTMRKVKKAIIEKEMPEAWEVLEEVIKGSVVLLNRAPTL
HRMSIQAFEPKLVEGNAIQLHPVVCPPFNADFDGDQMAVHVPLSAAAQAEARFLMLSRYN
IISPAHGKPISLPTQDIIIGSYYLTTVGKEFDSLKEEDVKWKFSSPEEAMLAYHLGFIKL
HTPILIKVAVNGEEKRIKTTLGRVIFNGILPEDLRDYNRIFDKKQINALVYETFKRHGID
RAADLLDDIKDIGFHYATVSGLTLSLKDLKIPPERDEILRKTWEKVRIIEENYEKGFLTE
EQRKSEIIRLWMSVTEEITKLTSKTLAEDPFNPIYMMVNSGARGNIDQVKQLAGIRGLMI
KAYDPRSREIKSKIFKGQAIHEALTFDYPVDKNLREGVDILQFFISTYGARKGQVDTAMN
TSFAGYLTRRLVDVAQSVTVAEPDCGTHEGIRAMDLIKEGTVVEKMNEFLFGRVLARDVL
DPETKEVLKNPETGKEYTRNTMLTDDDANFLASYKKMVDVVRYEEIDITELSLPNMYAEI
AEPVGEYEEGTELTWDVIKAAKNEGKYRIKVKVYPVVGTVYAEEEPLYDKKGERQLLVYQ
EVINEIVAKMLEENGIEKVSVRPDIIVRSPLTCESEYGVCAACYGMDLSNHKIVNVGEAV
GVVAAQSIGEPGTQLTMRTFHVGGVMGASDIVSGLTTVEKTFEPYAFLREEKSGGKKEIR
KYYGSEAILCEVDGFVKDIATDESGRTVIYIEDYAGNIHAYKVPKRAKVRVEKGQKVLRG
ETLTSGAIVWWKLLELESEKGVMTAMNLLKIIKNAYVQQGVSIHDKHFEIIFKQMLSMAT
IVDPGDSDYLPDQLVPLVDIKRFNREILEGNAKVEENRKWVIGKTLAKRIITETEEGELV
ELAQKGDEVTEELLKKIIEAGIKEIDVFEKDKVVTYQILPKEPIKYKRRLLSLKKAALNY
PGWLSAAAFEETAWVLTAAAIEGKVDPLIGLKENVIVGQLIPAGTGLDVFAGIQVEETPR
AAVEEELA
NT seq
5067 nt
NT seq
+upstream
nt +downstream
nt
atgtcctctttcaagaggaagataaaggcaattcagataaagatagcctctccggaagtg
ataagaagctggtctggaggagaggtcaagaaaccagaaacgatcaactacaggacattc
aagcccgagagagacggccttttctgtgagaggatttttggtcctgtgaaggactacgaa
tgtgcctgtggtaagtacaaggggaagaaatacgaaggtaccgtctgtgaaaggtgtgga
gtcagggtcgaatccagagaagccagaagaaaaagaatgggacacatagaactggcagca
cccgctgtgcacatctggtatctcgagagcataccgagtgttctcggaacactcttgaac
atgagcacttcagacctggaaaacatcatctactacggcagtcgccgtgtcatagaaaga
gcttttattgtgactgatcccaaagatactccgttctcccagggggatgtgatctacgag
accgagtacaggatatacagaaaaaagtgggatttcgatgttgaacaggcgtttgtggtg
aagaatccaaaatctcctgttctttccgatatcgatggagaagtgactttgaagacagaa
aagtccatcacaggaagggaaatcacctggatcattgtgaagaacatcaccagagccaca
cacacggtgctccctggaatgattctcgttgtgaaagatggccaagaagtggaaaaagga
caggatctgacaaaagaaatgacaatcgaccctgtttacgctccgtttgacggtcacgtg
gaaatagatgaactttcgaatactattacgttgaaacctctcacaaccagtaaggatcag
ccggttgttttcacgattccttatggagcgaagattcttgtttcgaacggccagaaggtg
aaaaaaggtgatcagatcacgacttctaccagcctcccagccgtcaaagcgagcatatct
ggtacagtgagatttggttccaacctcaacataagagcacttgaagacggaaacttcgaa
gtcctttccaccggtgaagtctatgtagaacaggttatagaggagagaaaatatcctgtc
tttgaaggagcgcttgtctacgttaacaacggcgaccaggtgaagaaaggagatcacctg
gctgacagattcctcttcgaggaagaatacctctctgccaccgagtacaaaatcttcgag
tcgcactatccaaccatgttcgatgttgaagagagaacggaaaacgacagaccgattgtg
gtcataacggatatagatcccgaggtttccaaagaaacgggtttgaaggttggcgatata
gtcacagaaaacgagtacgaagcataccttcagatctatccagaaaagatagtggctgat
gccggggcacaggcgataaagaaactgcttcagaatctggatctggaagcgcttcaggca
gaaattgaagcggaactcaaaaagttaccttcttccagctcgaaggcgataaagctcaga
agaaggttgaagatggtaaaggatttcctgaaatctggtaacaaacccgaatggatggtt
cttgaggttgttcctgtgattccacccgacctcaggccgatgatacagatcgagggagga
aggttcgccacaacagacctcaacgaactttacagaagactcataaacagaaacaacaga
ctcaaaaagcttctggagctcggggcacctgagatcattctgagaaacgagaaaagaatg
cttcaagaagcggttgacgctctcattcacaacggttctgattcggaaggaaagagaagc
agaagagccgttttgaaagatagaaacggtaggcctctgaaatcgctcaccgatctactg
aaaggaaagaaaggaagattcagaaggaacctgcttggaaagcgtgtggattactctgga
agagcggttattgtcgtgggcccaaatctgaagatacaccagtgcggtattccaaagaaa
atggcaatggagctcttcaaaccgtttgttctggcgaaactccttggagagggttcttcc
agcaaaaccatgagaaaggtcaagaaagcgatcatagaaaaagagatgccggaagcctgg
gaagtgcttgaagaagtgataaagggaagcgtcgttcttttgaacagagctcccacactc
cacaggatgtcaattcaggcgtttgaaccaaaactcgttgaaggaaacgccatacagctc
catcctgtcgtgtgtccaccattcaacgcggattttgacggtgaccagatggcggttcat
gtaccgctttcggccgcggcgcaggcagaggcaagatttctcatgctttcgagatacaac
atcatctccccagcacacgggaagccgatttcgctgccgacgcaggatatcatcataggt
tcttactacctcacaacagttggtaaagaattcgactcactgaaagaagaagatgtgaaa
tggaagttctcttcgcccgaagaggcgatgctggcttaccaccttggattcataaaactt
cacactccgattctgataaaggttgctgtcaacggcgaggaaaaacgaataaagacgact
ctgggaagagtgatcttcaacggcattctcccggaagatttgagggattacaatagaatt
ttcgacaaaaaacagataaacgctctcgtctatgaaacgttcaagagacacggtatagac
agagctgcggatctcttggatgacataaaagacatcggtttccactacgcaaccgtttcc
ggtctgactctctcgttgaaagatctgaagataccaccagagagagatgagattctcagg
aagacctgggagaaggtcagaataatcgaagagaattacgaaaagggcttcctgacggag
gaacagagaaagagtgaaatcatacgactctggatgagtgtgacggaggagatcacaaaa
ctcacatccaaaacgctcgcagaggatccgttcaaccccatatacatgatggtgaactct
ggtgctagaggtaacatagatcaggtgaaacagctcgccggtatcagaggtttgatgatc
aaggcgtacgacccaagatccagggaaataaagtccaagatcttcaagggtcaggcgatc
cacgaagcactcacattcgattacccggtcgataagaacctcagagaaggtgttgacatc
ctgcagttcttcatttccacctacggtgccagaaaaggacaggttgacacagcaatgaac
acatcctttgcgggatatctgacgaggcgtcttgtggatgtagcccagagcgttacagtg
gcggaacccgactgtggaacacatgagggaatcagagccatggatctgataaaagaagga
acagtcgtggaaaagatgaacgagttcctcttcggtagagtgctcgcaagggacgtgctt
gatccagaaacaaaagaagttttaaagaatccagaaacgggcaaggaatacacgagaaac
accatgctcacagacgacgatgcgaacttcctggcttcttacaagaaaatggttgacgtt
gtgaggtacgaagagatagacataacagaactctcactccccaacatgtacgccgagata
gcagaacccgttggagagtacgaagaaggaacggaactcacctgggatgtgataaaagct
gctaagaacgaagggaaataccgcataaaggtgaaggtctatcctgtcgttggaactgtt
tacgcggaagaggaacctttgtacgataaaaaaggtgaaagacagcttctcgtgtaccag
gaagtgataaacgagatcgtggcgaagatgctcgaagaaaatggaatagaaaaagtttcc
gtgagacccgatatcattgtgagatcgcctctcacctgtgagtccgagtacggcgtctgc
gctgcctgttacggtatggatctttccaaccacaagatagtgaacgtcggagaagcggtg
ggagttgtggccgctcagtccataggagagcccggcacacagctcacgatgagaacattc
cacgttggaggagtcatgggtgcgagcgacatcgtcagcggtctcacaactgtggagaag
acgttcgaaccgtacgcgttcttgagagaagaaaagagcggtggaaagaaagaaatcaga
aaatactatggatccgaagccattctgtgtgaggtcgatggtttcgttaaagacatagca
accgatgaaagtggtagaacggtgatttacatcgaggattacgccggtaacatccacgct
tacaaagtaccgaagagagcgaaagtaagggtagaaaaaggccagaaagtcctgagagga
gaaaccctcaccagcggcgccattgtgtggtggaaactcctggagctcgaatcagaaaaa
ggtgtaatgacggcgatgaatctgctgaagatcataaagaacgcctacgtccagcagggt
gtgagtatacacgacaagcacttcgagatcatattcaaacagatgctaagcatggcaacg
atcgtcgatcctggagacagcgattacttgccggatcaacttgtgccgcttgtggatata
aagagattcaacagggaaatcctcgaaggaaatgcgaaagtggaagagaacaggaagtgg
gtcataggaaagacgctcgcgaagaggatcatcacggaaacagaagagggagaactcgtg
gaactcgcgcaaaaaggcgatgaagtgaccgaggaacttttgaagaagatcatagaagcg
ggaataaaagagatcgacgtcttcgaaaaagataaagttgtgacgtaccagattctcccg
aaggaacctatcaagtacaagagaagactcctgtcgctcaagaaagcggctcttaactac
cccggctggctcagcgcggctgcgttcgaagaaactgcgtgggtgttgaccgcagcggcg
atcgaaggaaaggtcgatccgctcattggattgaaggaaaacgtgatcgttggtcagctg
atacccgcaggaaccggtctcgatgtcttcgcgggaatccaggtggaagaaaccccaagg
gctgcagtggaagaagaactcgcgtga
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integrated database retrieval system
