Phaeoacremonium minimum: UCRPA7_1583
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Entry
UCRPA7_1583 CDS
T03102
Name
(RefSeq) putative atp-dependent rna helicase dhx8 protein
KO
K12813
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16 [EC:
5.6.2.6
]
Organism
tmn
Phaeoacremonium minimum
Pathway
tmn03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tmn00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
UCRPA7_1583
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tmn03041
]
UCRPA7_1583
Enzymes [BR:
tmn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
UCRPA7_1583
Spliceosome [BR:
tmn03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
UCRPA7_1583
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
HA2_C
WHD_HA2
DEAD
AAA_22
AAA_19
nSTAND_NTPase5
nSTAND3
AAA_30
T2SSE
Cas3-like_C_2
ABC_tran
SRP54
Flavi_DEAD
Motif
Other DBs
NCBI-GeneID:
19321746
NCBI-ProteinID:
XP_007912354
UniProt:
R8BUD3
LinkDB
All DBs
Position
Unknown
AA seq
974 aa
AA seq
DB search
MSSKKYAFVPMDDPEPAVSKKKERKHRSEHRERRRDRHRRKEDDFDDRWGDEEADPEEEA
REAEEPEFRESASKRVKLSHDDGDRSDTPLDDSEKEARRDREERDAFARRLRDKDDGKSS
KKVVEDALDRRRKLADDSKARDEALPDLRERSRQDYLKKREAERLALLRKQVAEETAELR
SGARLSEKEKAEFAKNREVLRLAEERLKIDDHRDGYYMPEDYITQKGKIDRKKKEDALYK
RYVEKDEYGQEKFVTEHEEWEREQASKAKAQIQRAEREDDGQYDYVLDEDQYVKWKLDFT
MAGEQMTKEQRFLQAQIDAAEKKQLSIQETRKSLPIYAYRDEFIAALEEYQILVIVGETG
SGKTTQLPQYLHEAGYTKDGMKVGCTQPRRVAAMSVAARVADEMDVKVGNEVGYSIRFED
NTSDKTIVEYMTDGMLLRKMMVEPHLSSFSAIMVDEAHERTVHTDILLALLKDLARERSD
LKLLISSATMNAAKFASYFDDAPIFNIPGRRYPVDIYYTPAPEANYLAAAITTIFQIHTT
QGAGDILVFLTGQDEIEAAEQQITDTARKLGGRIKELIICPIYANLPSDLQAKIFEPTPP
NARKVVLATNIAETSLTIDGIVYVIDPGYVKENIYNPATRMSNLVAVPCSRASANQRSGR
AGRVGPGKCFRLYTKYSYMNEMDESPTPEIQRTNLNSIVLQLKSLGIDKLLDFDFMDPPP
TEALIGALDQLYALQALNHKGELTKMGRQMAEFPTDPMLAKAVLAADKEGCVEEVLSIVS
MLSEASALFFRPKDKKIHADSARRRFTVKEGGDHVTLLNVWNQWVDSDFSQIWSKENFLQ
QRSLTRARDVRDQLVKLCDRVEVTISTCGASNLRPIQRAITAGFFPNAVRIDRRGDGYRT
MKNNSSVWVHPSSVLKEVDPPPKTIIYHELVQTSKEYMRSCLPIELKWLQELAPHFYKKK
EIEAMEEKKMPKAR
NT seq
2925 nt
NT seq
+upstream
nt +downstream
nt
atgagctcgaagaaatatgccttcgtccccatggacgaccccgagccggcggtctcgaag
aaaaaggagcgcaagcaccgttcggagcaccgcgaacgacgacgggacaggcaccggcgc
aaagaggacgactttgacgatcgctggggcgacgaggaagcagaccccgaggaggaggct
cgagaagctgaggagccagagttccgcgagtcggcttcgaaacgagtcaagctgtctcat
gacgatggcgaccgttcagacacgccgttggacgactcggagaaggaggctcgccgggac
cgcgaggagcgtgatgctttcgccaggaggctgcgcgacaaggacgacggcaagagcagc
aagaaggtcgtcgaggatgccttggatcggcgccggaagctggcggacgactcaaaggcg
cgcgacgaagctttgcctgatctccgagaacgttcccgacaggactacctgaagaagcgt
gaggcagagcgtctggctctgctacggaaacaagttgccgaagaaacagcagagttgcgc
agtggcgctaggctgtctgagaaggaaaaggccgagttcgcgaagaacagggaggtcctt
cggctcgcagaagagcggttgaaaattgatgatcaccgcgatggatattacatgccggag
gactacatcacacaaaaaggaaagattgataggaagaagaaggaggacgcactatacaag
agatatgtcgaaaaagacgagtatggccaggagaagtttgtcacggagcatgaggagtgg
gagcgggagcaggcttctaaggcgaaagcccagatacagcgagcagaacgcgaagatgac
ggccagtatgactatgtactagatgaagaccagtatgtgaagtggaagctggacttcacg
atggctggggagcagatgaccaaggagcagagatttcttcaggcacagatcgatgctgca
gaaaagaagcagctttcgatccaagagactaggaaaagcctcccgatttacgcatatcga
gacgagtttatagcagcactggaggagtaccagattcttgttatcgttggagaaactggt
agtggaaagacaactcagctaccgcagtatcttcacgaagcaggctacaccaaggatggc
atgaaagttggatgtacacaacctcgaagagttgcagcaatgagtgttgcagctcgggtg
gccgacgaaatggacgtcaaggttggcaacgaggttgggtactcgattcgtttcgaggac
aacacatccgacaaaaccattgtcgagtacatgactgatggtatgctgttacggaaaatg
atggttgaacctcatctttcaagcttctcggctatcatggttgacgaggctcacgagaga
actgttcataccgacatcttgttggccctcctgaaggatttggcacgggaaagatctgat
ctgaagctactcatttcatctgcgactatgaatgcggccaaatttgcatcgtatttcgat
gacgcccctatcttcaacattcctggtcgtcggtaccctgtcgatatctactacactcct
gctcccgaagccaactacctggctgctgctattacaacaattttccaaatccacactacc
cagggcgcaggcgatatcctggtcttcctaactggtcaggatgagatcgaggctgcagaa
caacaaattacggacaccgcacgcaaattgggtggtcggatcaaggagttgatcatctgt
cctatttacgccaatttaccatcagatctccaggctaagatcttcgagccgacaccgcct
aacgccaggaaggttgtcttagccaccaatatcgccgaaactagtttgactattgatggc
atcgtgtatgtcattgaccctggctacgtcaaggagaatatttataatccagcgacaaga
atgtcaaacttggttgccgtcccttgttcaagagcgtctgccaaccaacgaagcggccgt
gctggtcgtgttggacccggtaaatgtttccggctttacaccaagtattcgtatatgaat
gaaatggacgagtccccgactccagaaattcaacggactaatctgaacagcattgtcctt
cagctcaagtctcttggtattgacaagctcttggactttgacttcatggatccacccccg
acagaagctctcattggggcgttggaccagctatatgctctccaagcactcaatcacaag
ggcgagctcacaaagatgggaaggcaaatggcagagttcccaaccgatcctatgcttgca
aaagccgtgcttgccgcggacaaggaaggttgcgtagaggaggttctgtctatcgtttcg
atgctgagtgaggcatctgcgctgttcttccgaccgaaagacaagaaaatccatgccgac
agtgcacggcggcgtttcactgtcaaggaaggcggagaccatgtcactcttctcaatgtc
tggaatcagtgggtggatagcgacttctctcagatctggtccaaggaaaatttcctccag
cagcgctcgctgacccgtgcccgcgatgtgcgtgaccaactcgtcaagctctgcgatcgg
gtcgaggtgacgatatccacctgcggagcaagcaatttacgtcccatacagcgggccatc
acggctggcttctttcccaacgccgtgaggattgataggagaggtgatgggtaccggaca
atgaaaaacaacagcagtgtatgggttcacccgtcaagcgttctaaaggaagtagacccg
ccaccgaagaccatcatctaccacgagcttgtgcaaacaagcaaagagtacatgagatca
tgccttcctattgaattgaagtggctgcaggaattagcgccacacttttacaagaagaag
gaaattgaagctatggaggagaagaagatgccgaaggcaagatga
DBGET
integrated database retrieval system
