Phaeoacremonium minimum: UCRPA7_160
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Entry
UCRPA7_160 CDS
T03102
Name
(RefSeq) putative tfiih p62 subunit domain-containing protein
KO
K03141
transcription initiation factor TFIIH subunit 1
Organism
tmn
Phaeoacremonium minimum
Pathway
tmn03022
Basal transcription factors
tmn03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
tmn00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
UCRPA7_160
09124 Replication and repair
03420 Nucleotide excision repair
UCRPA7_160
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tmn03021
]
UCRPA7_160
03400 DNA repair and recombination proteins [BR:
tmn03400
]
UCRPA7_160
Transcription machinery [BR:
tmn03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
UCRPA7_160
DNA repair and recombination proteins [BR:
tmn03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
UCRPA7_160
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PH_TFIIH
BSD
DUF5499
Motif
Other DBs
NCBI-GeneID:
19321765
NCBI-ProteinID:
XP_007910949
UniProt:
R8BY97
LinkDB
All DBs
Position
Unknown
AA seq
646 aa
AA seq
DB search
MSSLPRGKAAYKKKDGILTLTEDRKHVTWTPLPGNGPPVVSLAVANVTNLQQTPDSAPKV
MLKIFEKLPDTEGEPVSYLFHFNSPTDARPEANAVKDLLSRLLTDVRTGDPSLPKPAAAT
STATNGTGASAAMSFANTVNAKSGPAPWFDDNHLKMDIELQQSLMKKDKGLHQTYMEARA
TKPDNISDAAFNSQFWSTRTNVLRAHAIEINQKKGSYNVLSTVKPEKNAEGNLTLKINVA
EVQMIFNQHPLVKRIYNENVPKVPEQQFWSRFFLSKLAKRLKGERVSDNDNPDPLFDKYD
PAENTTAFTSKITSQQVPSFIDLEANEENQGGFKSGNRKDVEMRPRSNIPIVKALNSLSE
KLMVNVAPSDQDPTDVSGVDDQVYQELSLRDLRGDAQEHRIMLNVKEQSQFFSDQAATSS
ANAQVYAKQIPSEVLFDVQSDLETLEDDGSGGIDLRTGIGVDDDSDSDEELQKAPHVGSR
AARKSAQSQILGGLAQRRAELYGHSSDETSPMGVPPEITQKAYITNATTTEFLKQFWNAF
LSGDPDRAQELAYHVESLRKSTQRIEAVADEAEVARHRIIEQKKEQIRAHFKQTGNKIRW
KPDSVGGGKKALLTLLSPTMNALKVAQNMYQAALAAEGIAVSTEHE
NT seq
1941 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcgctgcctcgaggcaaagctgcgtacaagaagaaagacggcattctcacgttg
acagaggatcgcaaacatgtcacctggactcctctgccgggcaatgggcctcctgttgtg
tcactggccgtcgccaacgtcacaaaccttcagcagacaccagacagcgcaccaaaggtg
atgttgaagatatttgagaagctgcctgacacggagggagagcctgtgtcctacctcttt
cacttcaattctcccaccgacgccaggcctgaggccaacgctgtcaaggacctactctcg
agacttctcacggatgtacgcaccggcgatccttcattgcccaaaccagctgctgctacc
tccacggccacaaatgggaccggggcgtctgcagccatgtcgttcgcaaataccgtgaat
gcaaagtctggccctgctccctggttcgatgataaccacctgaagatggacatcgagctg
cagcagtctcttatgaagaaggataaaggcttgcatcaaacgtatatggaagcacgagca
acaaagccagataacatctcggatgcagcttttaactctcaattctggtctacaaggacc
aatgttttgagagcccatgccatcgaaatcaaccagaagaagggctcgtacaatgttctt
tcgaccgtcaagcccgagaagaatgctgagggcaacctaacactaaagatcaatgttgcc
gaagtccagatgatcttcaaccagcatcctttggtaaagcgaatctacaatgagaatgtc
ccaaaagtacctgagcagcaattttggtcgcgtttctttctgagtaaactcgcaaagaga
ctaaagggagagcgtgtttctgataacgacaacccggaccctttattcgacaaatatgac
ccggcggagaatactacagcctttactagcaagatcacttcccaacaggtcccctcattt
attgatctggaggccaatgaagagaaccaaggcggtttcaagagtggaaatcgcaaagat
gtcgagatgaggcccagatctaacatcccaatcgtcaaggcgttgaatagccttagtgag
aagcttatggtcaatgttgcgccatcagaccaggaccccaccgacgtctctggtgttgat
gaccaagtctaccaggagctttcccttcgagatctgcgaggagatgcccaggagcaccgt
attatgctcaatgttaaggaacagagccagtttttctccgaccaagccgcgacctcctca
gcaaatgcacaagtctatgctaaacagatcccctccgaagtcttgttcgatgtgcagtcc
gacttggagacactagaagacgatggctcgggaggtatcgacttacgaacagggattggt
gtcgacgatgacagcgacagtgatgaggaactgcagaaagcacctcatgttggctcccgt
gccgcacgaaagtctgctcaaagccagattcttgggggcttagctcagcgaagagccgag
ctgtatgggcatagctctgatgagacgtcacccatgggagttccgcccgaaattacccag
aaagcttacattaccaatgccactacaacagaatttctcaagcagttttggaatgcattt
ctgtcgggagatcctgaccgcgcacaagagttggcgtatcatgttgaatccctgaggaaa
tctacacagcgtatcgaggctgttgcagacgaagcagaggtggctaggcataggatcata
gagcagaagaaggaacaaatcagagcgcattttaagcagacaggcaacaagatccgttgg
aagccggactcggttggtggagggaaaaaagctttgttgactttgctcagcccgactatg
aatgcactcaaagtagctcagaacatgtatcaagcggcgcttgcggccgagggaattgct
gtgagcacagaacacgaatag
DBGET
integrated database retrieval system
