Phaeoacremonium minimum: UCRPA7_1669
Help
Entry
UCRPA7_1669 CDS
T03102
Name
(RefSeq) putative pre-mrna-splicing factor rse-1 protein
KO
K12830
splicing factor 3B subunit 3
Organism
tmn
Phaeoacremonium minimum
Pathway
tmn03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tmn00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
UCRPA7_1669
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tmn03021
]
UCRPA7_1669
03041 Spliceosome [BR:
tmn03041
]
UCRPA7_1669
03036 Chromosome and associated proteins [BR:
tmn03036
]
UCRPA7_1669
Transcription machinery [BR:
tmn03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
UCRPA7_1669
Spliceosome [BR:
tmn03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
UCRPA7_1669
Complex B
UCRPA7_1669
Complex C
U2 SnRNP specific factors
UCRPA7_1669
Chromosome and associated proteins [BR:
tmn03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
STAGA complex
UCRPA7_1669
TFTC complex
UCRPA7_1669
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_RSE1_1st
CPSF_A
Beta-prop_RSE1_2nd
Motif
Other DBs
NCBI-GeneID:
19321840
NCBI-ProteinID:
XP_007912439
UniProt:
R8BTR9
LinkDB
All DBs
Position
Unknown
AA seq
1077 aa
AA seq
DB search
MAATSNMFLYSLTIQPPTTIGQAILGQFSGTKEQQIITASGSRLSLLRPDPTQGKVITLV
SHDIFGIIRAISSFRLAGSNKDYIILATDSGRIAIIEYLPAQNRFSRIHLETFGKSGVRR
VVPGQFLAADPKGRACLIAATEKNKLVYVLNRNSQAELTISSPLEAHKPGVLVFSMVALD
VGYANPVFAALETDYTDADQDPSGEAYQEIETQLVYYELDLGLNHVVRKWSEPVDPTSSL
LFQVPGGNDGPSGVLVCGEENVTYRHSNQEAFRVPIPRRRGATEDPQRKRNIVAGVMHKL
KGSAGAFFFLLQTEDGDLFKVTIDMVEDADGNPTGEVKRLKIKYFDTIPVASSLCILKSG
FLFVASEFGNHQFYQFEKLGDDDEELEFRSDEFPTDPRAFYEPVYFYPRPAENLALVESI
DSMNPLIDCKVANLTDEDAPQIYAVCGNGARSTFRTLKHGLEANEIVASELPGTPSAVWT
TKLQRDDQYDAYIVLSFTNGTLVLSIGETVEEVSDTGFLTSVPTLAVQQLGDDGLIQVHP
KGIRHIRHGRVNEWAAPQHRSIVAAATNERQVAIALSSGEIVYFEMDTDGSLAEYDEKKE
MFGTGFVMTPLSYAELEWGWNFSSEQCEEGMVGIHANYLRIFSIENLAENLIQKSIPLTY
TPRRLVKHPDQPYFYTIEADNNTLAPELRQKLLSDPGAVNGDAKVLPPEEFGYPRGRGRW
ASCISVVDPASEDSTVLQRVDLEENEAAVSAAVVSFASQDGESFLIVGTGKDMVLNPRQF
SEGYIHVYRFHDNGRDLEFIHKTKIEEPPMAMLPFQGKLLAGIGKTLRVYDLGLRQLLRK
AQADVAPQLIVSLQAYGNRIVVGDVQQGVTYVVYKYESNKLLPFVDDTIARWTTCTAMID
YESTAGGDKFGNVWILRAPEKTSVEADEPGSEVHLLHAREYLHGAPNRLNLMAHFYTQDV
PTSITKCNLVVGGQEVLLWSGIQGTIGALIPFVSREDVDFFQSLEQHMRSEDSPLAGRDH
LMYRGYYTPVKGVIDGDLCERFTLLPSDKKQMIAGELDRSVREIERKISDIRTRSAF
NT seq
3234 nt
NT seq
+upstream
nt +downstream
nt
atggcggcaacttcaaacatgttcctctattccctgacaatccagcccccgacgactatc
ggccaggctatcctcggccagttctccggcaccaaagaacaacagatcatcacggcttca
ggctctcggctgtctctacttagacctgatccaacacagggcaaggtcattaccttggtg
tctcacgatatcttcggcattattagagctatttcatccttccggctagctggaagtaac
aaggactatatcatccttgcgacggactcaggcaggatcgccatcatcgaatatttgccg
gcgcaaaatcggttttcacggatacatcttgagacatttggaaagtctggagtacgccga
gtcgttcccggccaatttctggcagcggatccgaagggcagagcctgtcttattgcggct
accgagaagaacaaacttgtctatgtcttgaatcgcaactcgcaggcggagttaacgata
tcatctcccctagaagcgcataagccaggcgttctcgtgttctccatggtagctcttgat
gttggctatgcgaacccagtttttgctgccctcgagacagattacacagacgcagaccag
gatccctccggtgaagcctatcaagagatcgagacacagcttgtgtattacgagcttgat
ttaggtctcaatcatgtggtgcgcaagtggtcagaaccggtggacccaacatcatcgtta
cttttccaagtccccggaggcaatgatggcccgagcggagtcctcgtttgcggcgaggag
aatgtgacgtatcggcattctaatcaagaggccttccgtgtgcctattccacgacgacgc
ggcgctacggaagatccgcaacgcaagagaaatatagttgcgggagttatgcacaaacta
aagggcagtgcgggcgcgttcttcttccttcttcaaaccgaggatggtgaccttttcaaa
gtaacaattgacatggtcgaagatgcagatgggaacccaacgggcgaggtgaagcgattg
aagattaagtacttcgacactatcccggtggcgtctagcctgtgcatcttgaagagcggt
ttcctcttcgtcgctagtgaatttggtaaccaccaattttaccaattcgagaagttgggc
gatgacgatgaggaactcgaatttaggagcgatgaatttccaaccgatcctagagccttc
tacgagccagtatatttctatccgaggcctgcagagaacctcgctcttgtggaaagtatc
gactcgatgaatcctctaatagactgtaaagttgcgaatctcacggatgaggatgcaccg
caaatctacgccgtctgcggaaatggagcccggagcacgttccgtacactgaagcacggg
cttgaagcgaacgagatcgtggcttcagaactgcccggtactccttcagctgtatggact
accaaattgcagcgggacgatcagtatgatgcgtatattgtactatcattcacgaatgga
acactcgttttgagcattggagagacagttgaagaagtcagtgatactggcttcctcact
tctgtaccaacacttgcagttcagcaactaggagacgatggcctaatccaagttcatccc
aaaggcattcgccacattcgtcacggccgtgtaaatgaatgggctgcaccgcaacatcga
tcaattgttgctgctgccacaaacgagcgtcaagttgcgatcgccctcagctcaggagaa
attgtctatttcgagatggacacggatggttcattagctgaatatgacgagaagaaagaa
atgttcggaactggatttgtcatgacacctttgagctatgcagaattagaatggggctgg
aacttcagcagcgagcagtgtgaggaaggcatggttggaatacatgccaattatctaagg
attttctctattgagaatttagcggagaatttgattcagaaatctattcctcttacttac
acacccaggcgactcgtgaagcacccggatcagccatacttctatactattgaagcagac
aacaatacccttgcgccagagctcagacaaaagttgctctcagatcctggtgcagtcaat
ggcgacgccaaggttctccctcctgaagagtttggttatccacgtggtcgaggccgatgg
gcatcttgtatcagcgttgttgacccagctagcgaggattctaccgttcttcagagggta
gatctagaagagaatgaggcggcagttagtgcagctgtcgtctcctttgcaagtcaagat
ggtgaaagctttctcatcgtcggaaccggcaaggatatggtgctcaaccctcgtcaattt
agcgagggctatatccatgtctaccgtttccatgacaatgggcgagatctcgaatttatt
cataaaacaaaaatcgaggagccgccgatggctatgctacctttccagggcaaattgctc
gctggtatcggaaagacactccgagtctacgacttgggtctaaggcagcttctcagaaaa
gctcaagcagatgttgcaccacagctgattgtttcactgcaagcttatggcaacaggatt
gttgtcggagatgttcagcaaggcgtaacgtatgtggtttacaaatacgagtcaaacaag
ctgttgccgttcgtggacgatacgatcgcccgatggactacatgcacggctatgatcgac
tatgaatctacagcgggaggtgataagttcggcaatgtctggatcctgcgagcaccagag
aagaccagtgtggaagcagacgagcctggctctgaagtccacctgcttcacgcccgtgaa
tacctacatggtgcaccgaatcgcttgaacctcatggcccacttttacacgcaagacgtt
ccaacaagcatcacaaaatgtaatttggtagttggtggacaggaagtcctgctatggagt
ggtatccagggcaccattggtgctcttatcccatttgtcagcagagaagacgtcgatttc
ttccagagcttggagcagcacatgcggtcagaagattcccccctggctggccgagatcac
ctaatgtaccgaggatactatacgcctgtcaagggggtgatcgatggtgacctctgtgag
aggtttaccctccttcctagcgacaagaaacagatgatcgccggcgagctagatcgttca
gtccgagaaattgaacgaaagatctcggacatccgtacccgctccgctttctag
DBGET
integrated database retrieval system
