Phaeoacremonium minimum: UCRPA7_2050
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Entry
UCRPA7_2050 CDS
T03102
Name
(RefSeq) putative mitotic control protein dis3 protein
KO
K12585
exosome complex exonuclease DIS3/RRP44 [EC:3.1.13.-]
Organism
tmn
Phaeoacremonium minimum
Pathway
tmn03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tmn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
UCRPA7_2050
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tmn03019
]
UCRPA7_2050
Messenger RNA biogenesis [BR:
tmn03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Exosome cofactors
UCRPA7_2050
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNB
Rrp44_S1
Rrp44_CSD1
OB_Dis3
PIN_4
CSD2
OB_HELZ2
OB_RNB
Motif
Other DBs
NCBI-GeneID:
19322261
NCBI-ProteinID:
XP_007912816
UniProt:
R8BSU2
LinkDB
All DBs
Position
Unknown
AA seq
985 aa
AA seq
DB search
MASIKRSAESDPFASNISSKVYVRSTKSGKVQKIVREVYLRQDIPCSSKLCASCLKTAPR
DASGNLSPFVLSEKPAGTKSFPQGHYLVPDTNAFLNAMDLFEQSSAFYDVIVLQVVLEEV
RNRSLPLYNRLIGLTKSDDKRFYVFFNEFRLETYVKREPGETVNDRNDRAVRSATKWYGE
HLARTKAKKLPAVVMLSNDRENLRKAKEEGISAQSLAQYVSSLEDADRLMDMIPEVQDRE
ISRERKPGEHLYPDYFTLSKMMTGVKSGLLHQGIFNVSPYNYLEGSIRVPAFPKALLVLG
RENINRAVDGDVVVVEVLPKDQWKEPSTQIIEEEAVTKNENADEDEGEEVISEKERKALQ
EEVKRTQSKGTEGHAQPTARVVGVIKRNWRQYVGHIDQSTTSQTSKQGRKQDTVFLIPMD
KKIPKIRLRTRQVAELLGKRLLVTIDAWDRDSRHPVGHFVRSLGEMESKAAETEALLLEY
DVQYRPFPKTVLDCLPKEGHDWRVPESTDDPGWRDREDLRGLLICSIDPVGCQDIDDALH
ARPLPNGNFEVGVHIADVSNFVKPNNAMDTEASIRGTTVYLVDKRIDMLPMLLGTDLCSL
KPYVERFAFSVLWEVNRDADIVNVRFTKSVIKSREAFSYEEAQLRIDDASQKDDLTNGMR
TLLMLSKKLKQKRMDAGALSLSSPEVKVQMESETSDPIDVKTKQLLDTNSLVEEFMLLAN
ISVAGKIYDAFPQTALLRRHGAPPKTNFDELANQLKVKKGLELRVDSSKTLADSLDTCVD
PKEPFFNTLVRIMATRCMMAAEYFCSGTQAYPEFRHYGLASEIYTHFTSPIRRYADLVAH
RQLAAAIGYEAIAPSQRSRGKLEAVCRNINVRHRNAQLAGRASIAYYVGQAVRGKVTEED
GFIMKIFSNGFVVLVPRFGIESLIRLRDLAEPEPQAAFDPEMYTLTTSGSRELSVELFQK
VRVRISDQKDESTGKRGVKMELVNP
NT seq
2958 nt
NT seq
+upstream
nt +downstream
nt
atggcgagtatcaagaggtcggcggagtccgatccctttgcttcgaacatatcgagcaag
gtctacgtcagatccaccaagagcggcaaggtccagaaaatcgtccgtgaggtgtacctg
cggcaagacattccctgctcatccaaactttgcgccagttgcttgaaaacggccccgagg
gatgcttccggaaatttatcacccttcgttctctcggagaagccggctgggaccaaatcg
ttcccgcaaggccactatctggtccctgacaccaatgcgttcctgaacgccatggatctc
ttcgagcagagctccgcgttctacgacgtcatcgtgctacaggtggtgctggaggaagtg
cgcaaccgctcgcttcctctctataaccgcctgatcggcctgaccaagagcgacgacaag
cgcttctacgtcttcttcaacgagttccgcctagagacgtatgttaagcgggaacctggc
gagactgtcaatgaccgcaacgaccgcgctgtcaggagtgcgaccaagtggtacggagaa
cacctggcgcgaacgaaggccaagaagcttcctgcagtcgtgatgctcagcaacgaccgg
gagaatctcaggaaggccaaagaggagggtatctcagcacagtcactagcccagtatgtg
agcagtttggaggatgcggacaggctcatggacatgatccctgaggtgcaggaccgcgaa
atctcgcgagagagaaagccaggcgagcatctctacccagactacttcaccttgtctaag
atgatgaccggagtcaagagcgggctgcttcatcagggtatcttcaacgtttcgccctat
aattacctcgagggctcaatacgcgttcctgcgttccccaaagccctgcttgttctcgga
agagaaaatatcaaccgcgctgtagacggcgacgtggttgttgttgaggttttgcccaag
gaccaatggaaagagccttcaacacagattatcgaggaggaggcggtaacgaagaatgag
aatgctgacgaagacgagggagaggaagtcatatccgaaaaggagaggaaagctctacaa
gaggaggtgaagagaacccagagcaagggcactgaaggccatgcacagcccacagcaagg
gttgttggcgttataaagaggaattggcgccagtatgttggtcacatagatcagtcaaca
acgagccagacgtccaagcaaggtcgaaagcaggatacggtgttcttaatcccgatggat
aagaagataccaaaaatccggcttcgcacgaggcaggtggctgaactcctaggaaagagg
ctgcttgtaacgatcgatgcctgggatcgcgattcgaggcatcctgtgggacactttgtc
agatcccttggtgagatggagagcaaagctgctgaaacggaggcgctgctactcgaatac
gatgttcagtatcggccatttcctaagaccgtcctggactgcttgccaaaggaggggcat
gattggcgtgttccggagagcactgatgatcctggctggagagacagagaagatcttcgt
ggacttctcatctgcagtattgatcctgttggctgccaggatattgacgatgctctccac
gcgcggcccttgccaaatggcaatttcgaggtcggtgtacacatcgctgacgtgtcaaat
ttcgtgaagcccaacaatgctatggatacggaagccagcattcgaggcaccactgtctac
ctcgtcgataagcgtattgacatgcttcctatgctgctaggcactgacctctgctcactg
aagccatatgtggaacggtttgcgttctccgtgctctgggaagtcaacagagatgctgac
attgtcaatgtccggtttacaaaatctgttattaagtctcgagaggccttcagttatgag
gaggcacagctgaggattgatgacgcatcacaaaaagacgatctcacgaacggtatgcgc
acgctgctcatgctttcaaagaaactcaagcagaagaggatggacgccggtgccctgagt
ttatcgtctcctgaagtgaaggttcagatggagtcggagacatcagatcccattgatgtc
aagaccaaacagctcctcgacaccaactcactagtcgaggaattcatgcttctagctaac
atcagcgtggcgggcaagatctatgatgctttcccgcagacggctctcttacgtcgtcat
ggagcaccaccaaagaccaatttcgacgagttagctaaccagctcaaggtaaagaagggt
ctcgagctgcgtgtcgactcctccaagacacttgccgatagtctcgacacttgcgtcgac
cccaaggagccgttcttcaatacgcttgtgcgcataatggccacgcgctgcatgatggcc
gccgagtacttctgctccgggacacaggcatatccagagttccgtcactacggtctcgcc
tcggagatttacacgcatttcaccagtcccattcggcgatacgctgacctcgtcgcgcac
agacagctcgccgccgccatcgggtacgaggccatcgctccgtcgcagaggagccgcggc
aagcttgaggccgtgtgccgaaatatcaacgtacgccaccgcaatgcgcagctggccggc
cgcgccagtatcgcctactacgtcggccaggccgttcgtggcaaggtcaccgaggaggac
ggtttcatcatgaagatcttcagcaacggcttcgtcgtgcttgtgccgcgcttcggcatc
gagagccttattcgactgcgtgatcttgcggagccggagccccaggccgcgtttgacccg
gagatgtacacgctgacgacgagcggtagtagagagctatctgtagaacttttccagaag
gtgcgggttaggatcagcgatcaaaaggatgagtccacggggaagagaggcgtcaagatg
gagctggtgaatccttga
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