Phaeoacremonium minimum: UCRPA7_212
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Entry
UCRPA7_212 CDS
T03102
Name
(RefSeq) putative replication factor c subunit 5 protein
KO
K10756
replication factor C subunit 3/5
Organism
tmn
Phaeoacremonium minimum
Pathway
tmn03030
DNA replication
tmn03410
Base excision repair
tmn03420
Nucleotide excision repair
tmn03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
tmn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
UCRPA7_212
03410 Base excision repair
UCRPA7_212
03420 Nucleotide excision repair
UCRPA7_212
03430 Mismatch repair
UCRPA7_212
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tmn03032
]
UCRPA7_212
03036 Chromosome and associated proteins [BR:
tmn03036
]
UCRPA7_212
03400 DNA repair and recombination proteins [BR:
tmn03400
]
UCRPA7_212
DNA replication proteins [BR:
tmn03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
UCRPA7_212
DNA Replication Termination Factors
ELG1-RFC complex
UCRPA7_212
Chromosome and associated proteins [BR:
tmn03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
UCRPA7_212
DNA repair and recombination proteins [BR:
tmn03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
UCRPA7_212
Check point factors
HRAD17(Rad24)-RFC complex
UCRPA7_212
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RFC_C
DNA_pol3_delta2
RCF1-5-like_lid
AAA_22
AAA
AAA_16
AAA_24
Rad17
Rep_fac_C
ATPase_2
T4SS-DNA_transf
ABC_tran
DUF7804
Motif
Other DBs
NCBI-GeneID:
19322338
NCBI-ProteinID:
XP_007911001
UniProt:
R8BYD8
LinkDB
All DBs
Position
Unknown
AA seq
352 aa
AA seq
DB search
MALIVDKHRPRSLDTLTYHHELSERLRALAQSGDFPHLLVYGPSGAGKKTRIVATLKELY
GPGVEKIKIDARVFQTSSNRKLEFNIVASVYHLEITPSDVGNYDRVVVQDLLKEVAQTQQ
VDQSARQRFKVVVINEADHLTRDAQAALRRTMEKYSPNLRLILLANSTANIIAPIRSRTL
LVRVAAPSHEEICDVLAASAKKEGWPTVKGLHKRIAEESGRNLRRALLMYEAVHAQNEKV
TDTTPIPPPDWEALIGQVAREMMDEHTPARILQVRAKLYDLLTHCIPPTTILRTLTFKLI
PMIDDALKADVIKWSAFYEHRIKTGTKVIFHLEAFVAKFMRILEMYLMSMDI
NT seq
1059 nt
NT seq
+upstream
nt +downstream
nt
atggcgttgatagtagacaaacacaggccgaggtctctggacacgctcacatatcaccat
gagctgtctgagcgtctgcgagctctggcccaaagcggcgactttccccatcttctagtg
tacggaccctccggtgctggcaagaagacccgtatcgtagcaacactcaaagagctctat
ggtcccggtgtggagaaaatcaagatcgatgcacgggtgttccagacctccagcaaccgc
aagctcgagttcaacatagtagcctcagtgtaccacttggagataacgccttccgacgta
ggcaactatgaccgggtggtggtgcaagacctgctcaaggaggttgcccagacgcagcag
gtcgaccagtcggcgcgccagcgcttcaaggtcgtcgtcatcaacgaggcggaccacctg
acgcgagacgcccaggccgcgctgcgtcgaacgatggagaagtacagtccgaacctgaga
ttgatcctgctcgcgaactcgactgcaaacatcatcgcccctatccgttcgcgaacgctg
ctggtccgggtggcagccccgagccacgaggagatctgcgacgtgctggccgcgtcggcg
aagaaggagggctggcctaccgtcaagggcctacacaagcgcatagcagaggagagcggg
aggaatctgcgacgagctctgctgatgtatgaggccgtccatgcacagaacgagaaagtc
acagacacaacgcccatccccccacccgactgggaggcactcatcgggcaggtcgcccgc
gagatgatggacgagcacacaccggcgcgcattctgcaagtgcgggcgaagctctacgat
cttctgacacactgcataccgccgaccacgatcctgcgcacactcaccttcaagctgata
ccgatgattgacgacgctctcaaggcggacgtcatcaagtggtcggccttctacgagcac
cgcatcaagacagggacaaaggtgatattccacctcgaggcgttcgtggccaagttcatg
cggatactggagatgtacctgatgagtatggacatatag
DBGET
integrated database retrieval system
