Phaeoacremonium minimum: UCRPA7_2230
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Entry
UCRPA7_2230 CDS
T03102
Name
(RefSeq) putative dna repair helicase rad25 protein
KO
K10843
DNA excision repair protein ERCC-3 [EC:
5.6.2.4
]
Organism
tmn
Phaeoacremonium minimum
Pathway
tmn03022
Basal transcription factors
tmn03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
tmn00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
UCRPA7_2230
09124 Replication and repair
03420 Nucleotide excision repair
UCRPA7_2230
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tmn03021
]
UCRPA7_2230
03400 DNA repair and recombination proteins [BR:
tmn03400
]
UCRPA7_2230
Enzymes [BR:
tmn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
UCRPA7_2230
Transcription machinery [BR:
tmn03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
UCRPA7_2230
DNA repair and recombination proteins [BR:
tmn03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
UCRPA7_2230
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ERCC3_RAD25_C
Helicase_C_3
ResIII
Helicase_C
SNF2-rel_dom
DEAD
Motif
Other DBs
NCBI-GeneID:
19322458
NCBI-ProteinID:
XP_007913000
UniProt:
R8BSD6
LinkDB
All DBs
Position
Unknown
AA seq
826 aa
AA seq
DB search
MPPKRKATSAIQGAAKVGRASAVSTPGSTTPRSLATSDSAEDTEEEEVEKNVQKFDISTY
DVKPKRRANDAVSKYFGNRDYSYLQLKPDHANRPLWIDPERGRIILESFNPLAPQAQDFL
ITIAEPLSRPTFLHEYALTTHSLYAAVSVGLHPQDIINTLDRFLKIPLPEGVRRFIESCT
QSYGKVKLVLKNNKYYLESADAEMLQRLLKDPVIGPLRVSSSEQLMRTTAPNMAGLVIPG
TKNAAGVREANNLEKPKDGEQPTEQDIYGALNEEDDDDDKEAVHAFQIEDHSVELVQKRC
LELEYPVLEEYDFRNDQVNANLEIDLRPATQIRSYQEKSLSKMFGNGRAKSGIIVLPCGA
GKTLVGITAACTIKKGVIVLCTSNMSVVQWKKEFEKWSNINPDDIAVFSSDNKSTFSGNT
GIIVTTYSMVTNSRERAHDSAKMMKFLQGREWGLMLLDEVHVVPANMFRRVTGTIKAHSK
LGLTATLLREDDKISDLNFLIGPKLYEANWMELSQQGHIAKVQCAEVWCPMTTEFYDEYL
KADTRKRSLLYVMNPRKFQACQYLINYHESRGDKIIVFSDDVYALAMYARKLKKAFLYGG
TSNAERQQVLQHFQDNNQVNTLFLSKIGDTSLDLPEATCLIQISAQYGSRRQEAQRLGRI
LRAKRRNDEGFNAFFYSLVSKDTAEMYYSSKRQAFLVDQGYAFKVITQLANIEKTPGLAF
ATAAERRELLQKVLVEVESAEGKKLTEIAEKETEGNDYYNGTARRSVKKPGVKRTAGTLG
ELSGGQDMAYIEQNKSVNKTLKKNKKDSNAFFKKIAREKERRKQQL
NT seq
2481 nt
NT seq
+upstream
nt +downstream
nt
atgcctccgaaacgaaaggcaacgtcggccatccagggggcggcgaaagtaggcagggcc
tcagccgtgtcgacgccgggatcaacgactccccgaagtctcgccacgtccgactcggca
gaagatacggaggaggaggaagtcgagaagaacgttcagaagtttgatatcagcacatac
gatgtcaagccgaagagacgggcaaatgatgcggtctccaagtactttgggaatcgtgac
tactcctacctccagctgaagccggatcacgccaaccgacctctatggattgaccccgag
cgaggcaggatcattctcgaaagtttcaaccctctcgcgccgcaggcacaggactttctc
atcaccatcgcagagcccctctccagaccgacgttccttcatgagtacgcattgactaca
cacagcttgtacgctgctgtctccgtcggacttcacccgcaagacattattaatacactg
gatcgattcctgaaaatcccgctgcctgagggagttcggcgcttcattgagagctgtact
cagagttatggcaaagtcaagctagttctgaaaaacaacaaatactatctggaaagcgcg
gatgcggagatgttacagcgtctgctgaaggaccctgtcattggacccttgcgggtgtct
agttcagagcagctgatgagaacgacggctccgaacatggccggcctcgtgatccctggc
acgaagaatgcagcgggcgttcgagaggcgaataacttagagaagcccaaggacggagaa
caaccgacggagcaagatatctacggcgcactgaatgaagaagatgacgacgacgataag
gaagcggtgcacgcattccaaatcgaagatcattctgtggaactagtccagaagcgatgt
ctggagctagagtatcctgtcctggaagagtacgatttccgaaatgaccaggtcaacgca
aatcttgagattgatctgcgacctgcgactcaaatcagatcgtatcaggagaagagtcta
agcaagatgtttggtaatggtcgagccaagagtggtatcatcgtcttgccctgtggagca
ggaaagaccttggtgggcatcactgccgcttgtaccatcaaaaagggtgtcattgttctc
tgcacgagtaacatgtcggttgtgcagtggaagaaggaatttgagaagtggtccaacatc
aaccccgacgacattgctgtcttttcctcagacaacaagtcaactttctctggcaacact
ggcatcattgtgacaacgtactcgatggtcacaaactcgagggaaagggcacacgactct
gctaagatgatgaagttcctccaaggtcgtgaatggggtcttatgctcttggacgaagtt
cacgtcgttcctgcgaacatgttccgaagagttaccggaacgatcaaagcgcattcgaaa
cttggacttacggctacgctcttgcgagaagatgacaagatttccgatcttaacttcctc
atcggccctaagctgtacgaggcgaactggatggagttgtcacagcagggacacattgcc
aaggtccagtgtgccgaagtgtggtgtccaatgacaacggagttctacgatgagtacctc
aaggctgatactcgaaagagatcattactctacgtcatgaatccgcggaaatttcaagcg
tgtcagtacctcattaactatcatgagtcccgtggagacaagattatcgtcttctcagac
gatgtctacgctttggcaatgtatgcacgaaagctcaagaaagcattcttgtacggtggt
acatcgaatgccgaacgtcagcaggtgcttcagcatttccaggacaacaatcaggtcaat
acgcttttcttgtcaaagattggtgatacatccttggacttgcctgaagcaacctgcctg
atccagatatcggctcagtatggttctcggagacaggaagcccagagattgggtcgaatc
ctccgagcaaagagacgaaacgatgagggcttcaatgcgtttttttactcgctggtgtcg
aaggacaccgcggagatgtactactcgtcaaagcggcaggctttccttgtagaccagggg
tatgcgttcaaggttatcacccagcttgccaacattgagaagacccccgggctagcgttc
gcgactgcggctgaaagacgggagctgctccagaaagtattggtggaggtcgagtctgcc
gagggcaagaaactgacggagatcgcggagaaagagaccgaaggcaacgactactataac
ggcacagcacgccgaagtgtcaagaagccaggggtcaagcgaactgcgggaactctgggc
gaactgagtggcggtcaggacatggcgtacattgagcagaacaagtcggtcaacaagacg
ctaaagaagaacaagaaagacagcaacgcgtttttcaaaaagattgcacgagagaaggag
aggcgtaagcagcagctgtga
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integrated database retrieval system
