Phaeoacremonium minimum: UCRPA7_2441
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Entry
UCRPA7_2441 CDS
T03102
Name
(RefSeq) putative activator 1 41 kda subunit protein
KO
K10755
replication factor C subunit 2/4
Organism
tmn
Phaeoacremonium minimum
Pathway
tmn03030
DNA replication
tmn03410
Base excision repair
tmn03420
Nucleotide excision repair
tmn03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
tmn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
UCRPA7_2441
03410 Base excision repair
UCRPA7_2441
03420 Nucleotide excision repair
UCRPA7_2441
03430 Mismatch repair
UCRPA7_2441
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tmn03032
]
UCRPA7_2441
03036 Chromosome and associated proteins [BR:
tmn03036
]
UCRPA7_2441
03400 DNA repair and recombination proteins [BR:
tmn03400
]
UCRPA7_2441
DNA replication proteins [BR:
tmn03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
UCRPA7_2441
DNA Replication Termination Factors
ELG1-RFC complex
UCRPA7_2441
Chromosome and associated proteins [BR:
tmn03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
UCRPA7_2441
DNA repair and recombination proteins [BR:
tmn03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
UCRPA7_2441
Check point factors
HRAD17(Rad24)-RFC complex
UCRPA7_2441
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac_C
AAA
Rad17
DNA_pol3_delta2
RCF1-5-like_lid
AAA_22
RuvB_N
AAA_assoc_2
AAA_11
AAA_16
AAA_28
Mg_chelatase
AAA_5
AAA_24
DNAX_ATPase_lid
AAA_14
AAA_19
AAA_7
DUF815
SLFN-g3_helicase
bpMoxR
AAA_3
ResIII
AAA_23
AAA_30
ARM_ECM29_C
Gp44_lid
RNA_helicase
ATPase_2
nSTAND3
DUF4863
Motif
Other DBs
NCBI-GeneID:
19322691
NCBI-ProteinID:
XP_007913196
UniProt:
R8BS02
LinkDB
All DBs
Position
Unknown
AA seq
379 aa
AA seq
DB search
MASFFDIKARKAAAANGGGKQEKQTNETPRAQPWVEKYRPKSLSDVAAQDHTITVLQRTL
QASNLPHMLFYGPPGTGKTSTILALAKELYGPEFMRSRVLELNASDERGISIVREKVKDF
ARMQLTNPAPGYKDRYPCPPFKIIILDEADSMTQDAQSALRRTMETYSKITRFCLVCNYV
TRIIDPLASRCSKFRFKSLDQGNAKKRLEEIAEKEGVPLEDGAVDALIKCSDGDLRKAIT
FLQSAARLVGASSKKDEDEDDMDVDKQPVTVKIVEDIAGVIPDDTVEKLVKAIKPRSSGE
TYQAVAKVVEDMVADGWSAGQVNSQLYQRIVYDEAIPDVQKNQIVMVFSEVDKRLVDGAD
EHLSILDLALRISSILAGR
NT seq
1140 nt
NT seq
+upstream
nt +downstream
nt
atggccagcttcttcgatataaaggccagaaaagccgctgctgccaacggtggaggaaaa
caggagaagcagacaaatgagactccaagggcgcaaccatgggtcgagaaataccgaccc
aagagtctcagtgatgtcgcagcccaggaccacacgatcacagtcttgcaacgaacactt
caagcctcaaatcttccacacatgttgttctatgggcctcccggaacaggaaagacctcg
actattcttgcactggccaaggagctctacggccctgaattcatgcgatcccgagtgcta
gagttaaacgcatccgacgagcgaggtatatccattgtacgagagaaggtcaaggatttc
gcacgcatgcagttgacgaatccggcgcccgggtacaaggaccgctacccctgcccgcca
ttcaagatcatcattctcgatgaggccgacagcatgacccaggatgcccagagcgccctc
cgtcgaactatggagacatacagcaagatcactcgtttctgtctcgtctgcaactatgtt
acgcgtataattgacccgcttgccagtcgatgcagcaagttccgcttcaagagtctagat
caagggaatgccaagaagagacttgaggagatcgcggagaaagaaggcgttccattagag
gatggcgcggttgatgctttgatcaagtgtagcgacggtgacttgagaaaggcaatcaca
ttccttcagagcgcggcgagactggttggtgccagttctaagaaggacgaggacgaagac
gatatggacgtcgataaacagcctgtgaccgtaaagattgtcgaggacattgctggcgtc
attccggatgacaccgtggagaaacttgtgaaggcgatcaaacctcgatcctctggcgag
acctatcaagccgtcgccaaggtcgtggaagacatggtggccgatggatggagtgctgga
caggtcaactcacagctctatcagagaattgtctatgatgaagccatcccggatgttcag
aagaatcaaattgtcatggttttctctgaggtcgacaagcgattggttgatggcgcggat
gaacatctatcaatactcgacctagctctccgtatatctagtatcttggctggtcgatag
DBGET
integrated database retrieval system
