Phaeoacremonium minimum: UCRPA7_2442
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Entry
UCRPA7_2442 CDS
T03102
Name
(RefSeq) putative sec63 brl domain-containing protein
KO
K12854
pre-mRNA-splicing helicase BRR2 [EC:
5.6.2.6
]
Organism
tmn
Phaeoacremonium minimum
Pathway
tmn03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tmn00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
UCRPA7_2442
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tmn03041
]
UCRPA7_2442
Enzymes [BR:
tmn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
UCRPA7_2442
Spliceosome [BR:
tmn03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
UCRPA7_2442
Complex C
U5 SnRNP specific factors
UCRPA7_2442
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sec63
DEAD
SNRNP200_wHTH
Helicase_PWI
ResIII
BRR2_plug
Helicase_C
AAA_22
Motif
Other DBs
NCBI-GeneID:
19322692
NCBI-ProteinID:
XP_007913145
UniProt:
R8BRP5
LinkDB
All DBs
Position
Unknown
AA seq
2218 aa
AA seq
DB search
MTDNHQRDVSQYKYSAMSNLVLQADRRFYTRRTDEASGDPESLAGRLSIKDMGARVARDI
APKQKKSAMPDIQRGAVGEGEDILLREQRRKAGAGPTRGGGILSGADALVEGLRYRPRTQ
ATRATFDVILTIVANNLGDVPQEVVRSAADAALEYLKDEDLKDFDKKKEIDELLGVSLSP
KEFNEMVNLGKKITDYDAQDDDEEMGDAGLGDDGEIDERQGVAVAFEDEDEDAEGIVDEV
REESSEDEEDEDEDEEDRPGLEEVAEAGGAGEDRDEEGAGLADEDAMIIDSATGAKRQSK
DKDSNYIAAREIDAYWLQRQIGKLYPDAHTQHDKTLQALHILSGQPDEEGGEEKQLREIE
NELMELFDYEHHEVVQKLIENREKVVWLTRLARAERAEERETIEREMVSEGLRWILDELH
GKSTDGQKKGKMEIKMDIDGPGFAAGADAKPERPEGQLIGGLQPRKLINLENIAFDQGNH
LMTNPKVRLPEGSTKRTGKGYEEIHVPAPKKRNDPSDVNVPITDMPEWARIPFSTTKSLN
KIQSKCYPSAFEDDGNMLICAPTGSGKTNVSMLTILREIGKNRNAETGEIDLDAFKIVYI
APLKALVQEQVGNFGARLKEFGIKVSELTGDRQLTKAQIAETQIIVTTPEKWDVITRKAT
DLSYTNLVRLIIIDEIHLLHDDRGPVIESIVSRTIRKTEQTGEPVRIVGLSATLPNYRDV
ASFLRVDPQKGLFHFDGSFRPCPLRQEFIGVTERKAIKQLKVMNEITYTKVLEHVGKNRN
QMLIFVHSRKETAKTARYIRDKALEMETINQILKSDAGTREVLQEEADQVNDKELKDLLP
YGFGIHHAGMSRPDRNAVEDLFAGGQIQVLVCTATLAWGVNLPAHTVIIKGTQVYSPEKG
SWVELSPQDVLQMLGRAGRPQYDTYGEGLIITTQGEMQYYLSLLNQQLPIESQLVSRLVD
NLNAEVVLGNVRSRDEGVEWLGYTYLFVRMLRSPGLYSVGPEYEDDEALEQKRVDLIHSA
ATVLRKANLIKYDDKTGKLQATELGRIASHYYITHGSMETYNNLIQPSITTIELFRVFAL
SAEFKYIPVRQEEKLELAKLLGRVPIPVKESIEEPHAKINVLLQAYISRLRLDGLALMAD
MVYVTQSAGRILRAIFEITMKKGWATVAKTALDLCKMAEKRMWPTMSPLRQFPTCPRDIV
QKAERIDVPWSSYFDLDPPRMGELLGLPKAGRIVTGLVAKFPRLDVQAQIQPMTRSMLRV
ELSITPNFEWDDSVHGASESFWILVEDCDGEDILFHDQFLLRKDYAESESNEHLVEFTVP
ITEPMPPNYFISVVSDRWMHSETRVAVSFQKLILPEKFPPHTELLDLQPLPVSALKAKDY
VALYPGWEHFNKIQTQTFNSLYTTDQNVFVGSPTGSGKTICAEFALLRHWSKQESGRAVY
IAPFQELVDLRFQDWQKRFSELRGGKDIVKLTGETTTDLKLLEAGDLILATPIQWDSLSR
QWKRRKNVQTVELFIADELHLLGGHMGYIYEIIVSRMHYIRTQTELPMRIVGLSVSLSNA
RDVGEWIDAKKHDIYNFSPHVRPVPLELHIQSYTIPHFPSMMLAMAKPTYLAITQMSPDK
PALVFVPSRKQTRATTRDILTACFAEDDEDRFLHAEVDQMRPLLARVHEEALAEALSHGV
GYYHEALSQSDKRIVKHLYDNGAIQVLVASRDVCWELDCTAHLVVVMGTQYFEGREHRYV
DYPLSEVLQMFGKALRPSKDGRGRGVLMLPAVKREYYKKFLNEALPVESHLHAFLHDAFV
TEISTKMIESGDDAINWTTFTYFYRRLLANPSYYSLTNTTHDGLSNYLSDLVETTLKELS
ESKIIEFDEDDGTVSPLNAAMIAAYYNISYITMQTFLLSLSARTKLKGILEIVTSATEFE
AIQIRRHEDNLLRRIYDRVPVKMSEPVFDSPHFKAFVLLQAHFSRMQLPIDLAKDQEVIV
SKVLSLLSATVDILSSDGHLNAMNAMEMSQMVVQAMWDRDSPLKQIPHFGPEVVKVANEF
GVKDILDFMDAMNPEENPQYSALVKQLGLSQKQLVEAANFTNEKYPDVSLEFDVEDPESL
QAGEPSYLNIRIEREIEDDDFDPTVHAPFYPSKKMESWWLVVGEENTKTLLAIKRITFGQ
KLNVRLEFTVPTPGEHDLKLFLMSDSYVGVDQEPGFSVTVAEAMEVDEDDDEDEDDEE
NT seq
6657 nt
NT seq
+upstream
nt +downstream
nt
atgacggacaatcatcagcgagatgtctcgcagtacaagtactcggcgatgtccaacctg
gtcctccaggcggaccgtcgattctacactcgccgaacagatgaggccagcggagacccc
gagtcattggccggccgactgtccatcaaggacatgggagcacgcgttgctcgagatatc
gcgccgaagcagaagaaatcagcgatgccggatatccagagaggcgcggttggagagggc
gaggacatcctcttacgagagcagcgcaggaaagcaggagctggaccaacaagaggcgga
ggcatcttgtctggtgcagacgcgctagtggaaggtcttcgatatcggccgcgcacccaa
gcgacccgagcaaccttcgatgtcatattaaccattgttgccaacaatcttggcgacgtc
cctcaggaagttgtccggagtgcggccgatgctgcattggaatacctcaaggatgaggac
ctgaaagattttgataagaagaaggaaatcgatgagcttctaggtgtcagtctcagccct
aaggaattcaacgagatggtgaatctgggcaaaaagataaccgattatgatgctcaagac
gatgatgaggaaatgggcgatgcaggactcggcgacgatggcgaaatcgatgagcgccaa
ggtgttgccgtcgctttcgaagatgaagacgaagatgccgaaggcatcgtggatgaggtc
cgggaggagtcttccgaggacgaagaggacgaggacgaggacgaggaggatcgtcctggt
ctcgaggaagttgctgaagcaggtggcgcaggtgaagacagagatgaagaaggcgccggc
ctagcagacgaagatgcaatgattatcgattcagcaacaggtgccaagcgacaaagcaaa
gataaggacagcaattacattgctgcccgcgaaattgatgcttattggcttcagcgtcaa
attggtaaactgtatccggacgcccacacacaacacgacaagacacttcaagcgctgcat
attctctctggccaacctgatgaggaaggaggtgaagagaagcagcttcgcgaaatcgaa
aacgagctcatggaactgttcgactatgaacaccacgaggttgttcaaaagctcatcgag
aatcgagaaaaagtggtatggcttactcggctggcgcgggctgaacgcgcagaagaacga
gagaccatcgagcgagagatggtctcggaaggcctgcgatggattctggatgaattgcat
ggcaagtccactgacggccagaagaagggcaagatggagatcaaaatggacatcgacgga
ccaggatttgctgctggggctgatgccaaacctgaacggcctgaagggcagttgataggt
ggccttcaacctcgaaaacttatcaacctcgagaacattgccttcgaccaaggaaaccat
ctaatgaccaatcccaaggtgagactcccggaaggttctaccaagaggactggaaagggc
tacgaagaaatacacgtccctgcgccgaagaagcgcaacgaccccagcgatgtgaacgtc
cccatcacagacatgcctgaatgggcccgtattcccttcagcaccacaaagagtctgaac
aagattcagtcgaaatgttatccttctgccttcgaggatgatggaaacatgcttatttgt
gcaccgactggtagtggcaagaccaatgtttctatgcttaccattctgcgggaaattggt
aagaacagaaatgcagagacgggcgagattgatctagatgcctttaaaatcgtctacatt
gcaccactcaaggctctcgtccaggagcaggttggtaacttcggcgcacgcctgaaggag
ttcgggatcaaggtgtctgagttgaccggtgatcgtcaactcacaaaggcgcagattgcg
gagacgcagattattgtgacaacccccgagaaatgggatgttatcacgagaaaagctacg
gatctatcctatacaaacctcgtacgtctcattataatagacgagatccatcttctgcat
gatgatcgtggccctgtcatcgagagcatcgttagcaggacgatacgaaaaacagagcag
actggcgagccggtgcggattgttggcttgtccgccacacttccgaactatagagacgtc
gctagtttcctccgggttgatcctcagaaagggttgttccactttgatggctcgttcagg
ccgtgccccttacgtcaggaattcattggcgtaacagagagaaaagcaatcaagcaattg
aaggttatgaacgagatcacctacaccaaggttttggagcatgtcggcaagaaccgcaac
cagatgctcatcttcgttcattctcgcaaggaaaccgcgaaaactgcccgctacatacgg
gacaaggctctcgagatggaaacaatcaatcagattctcaagagcgatgcgggtacgaga
gaagttttgcaagaagaagcagaccaagtcaacgacaaggaactaaaagacttgctgcct
tacggcttcggcattcatcatgccggcatgagccgaccagatcgaaatgctgtggaagat
ctcttcgcaggcggccagatccaggttctcgtttgtacagccacattggcatggggtgtc
aacttgccagcacacaccgtcatcattaaaggtacccaagtctactcccctgagaagggt
agctgggtcgagctcagcccacaagatgttctgcaaatgctaggacgtgctggtcgccct
cagtacgacacatatggtgagggtctgatcattaccacccaaggcgaaatgcagtattat
ctgtctctcctcaaccaacaactgccgatcgaaagtcaacttgtaagtcggctagttgat
aatttgaatgcggaggttgtccttggcaatgtgcgcagtcgtgacgaaggagtagagtgg
cttggatacacctatctcttcgtccgaatgcttaggtcccctggcctctatagcgttgga
cctgagtatgaagacgacgaggctctggaacagaagcgagtcgatctcattcattccgcc
gctaccgtattgaggaaagccaatttgatcaagtatgatgataagacgggaaagctccaa
gctactgagctcggccgcattgcatcgcactactacatcacgcatggttcgatggagacc
tataataaccttattcagccatctatcacaaccatcgagcttttccgcgtatttgctctg
agtgccgaattcaaatacattcctgttagacaagaagagaagcttgaactcgctaagttg
cttggacgagtcccaatcccagtcaaagagagcattgaggagcctcacgcaaaaataaac
gtccttttgcaagcatacatctcccgtttgcgtctcgatggtttggctctcatggccgac
atggtgtacgttacccagtctgcaggtcgtattcttcgagcgatttttgagatcacgatg
aagaaaggttgggccactgttgccaagacagctctagatctgtgcaagatggccgagaag
agaatgtggccaacaatgtcgccgcttcgccaatttcctacatgccctagagatattgtc
caaaaggccgaaaggatcgacgtaccttggagcagctattttgatctcgaccccccgcgc
atgggagagctgctagggctgcccaaagctgggcgtattgtaaccggactggttgctaag
tttcctagactggacgtgcaggcacagattcaacccatgacgagatcgatgctccgtgtt
gaattgagcatcacacccaactttgaatgggacgatagtgtccatggcgcttctgaaagc
ttttggattcttgtcgaagactgtgatggggaagacatccttttccatgaccaatttctt
ttacggaaagactatgcagagtcagagtcgaatgagcacctggttgagttcactgtgccc
attactgagccaatgccacccaattacttcatctccgtggtctcagacaggtggatgcat
tctgagactcgagttgcagtctctttccagaagctcattctccctgagaaattcccgccg
cacacggagttgctagatttacaacctctcccggtatctgctttaaaggcgaaagactat
gtcgccttgtatcccggatgggagcatttcaacaagatccaaacgcaaactttcaattcg
ctgtacacaacggatcaaaatgtcttcgtcggttcgccgactggaagcggaaagactatt
tgtgccgaatttgcgttgctccgccattggtctaagcaagaaagcgggcgtgccgtgtat
attgcgccattccaggaactcgtggatcttcgtttccaggattggcaaaagcgtttctca
gagttgagaggtgggaaggacatcgtgaagttgacaggagagactaccactgatctcaag
ctccttgaggcaggggacctcatccttgcgactcccattcaatgggattcgctctctcgg
caatggaagcggcgtaagaatgtccagaccgttgaactcttcattgctgacgaactacac
ctgcttggtggacacatggggtacatctacgagatcatcgtatcccgaatgcattacatc
cgaacgcaaacagagctgcccatgagaattgttggtctcagcgtctccctttccaatgcg
cgagatgttggcgaatggatagatgcgaaaaagcatgatatctataatttcagccctcac
gtccgaccagtcccgctagagcttcacatccagtcctataccatccctcatttcccatca
atgatgctcgctatggcgaagccaacatacctggctatcacacagatgtctcccgataag
cctgctcttgtcttcgtgccaagtcgaaagcagacaagagctacaacgcgtgacattctt
acagcgtgtttcgcagaggatgacgaagaccgatttctccatgccgaagttgaccaaatg
cggcctcttctggcccgtgtacacgaggaagctttagccgaggcgctttctcatggtgtt
ggctactatcatgaagctctcagccagagcgacaagcgcatcgtcaaacatctttacgac
aatggtgccatccaagttcttgtagcatctcgtgacgtctgctgggagcttgactgtaca
gctcacttggtagtcgttatgggaacgcaatactttgagggcagagaacatcgatatgtc
gattacccacttagtgaagttttgcaaatgtttggcaaggctctgcgcccatccaaggat
ggcaggggcagaggtgttctcatgcttcccgcagtcaagagagaatactataagaagttc
ctcaacgaggctttgccagtggagtctcatctccatgctttcttgcatgacgcgtttgtc
actgagatcagcactaagatgattgaatcgggtgatgatgctatcaactggacaacgttc
acgtacttttaccgccgtcttcttgccaacccaagctactatagtctgacgaacaccaca
catgacggtctgagcaactatctctctgacttggtggagacgacgctcaaggagctgtcc
gagtcgaagattatcgagttcgatgaagacgacggaacggtgtccccgttgaacgcagct
atgatcgcggcgtactacaacatctcttacatcaccatgcagaccttcctgttgtcgctt
agtgcacgtacgaaactcaagggcatcttggagattgtgacctccgccacagagtttgag
gcaattcagatcagaagacatgaggacaatctcctccgtcgtatatacgacagagtgccc
gtcaagatgtcagagccggtgtttgattcaccgcatttcaaagcatttgttcttctccaa
gcacatttctcacgaatgcagctgcccatcgacttggccaaggatcaagaggtaattgtc
tctaaggttcttagcctcctaagcgctactgttgatatcctgtcatccgacggacacctc
aatgcaatgaacgcgatggagatgtcacaaatggtggtccaagccatgtgggatcgcgac
agtcctctcaagcaaatcccgcacttcggtccggaagtcgtcaaagttgcaaacgaattt
ggagtcaaggatattcttgacttcatggatgcaatgaatccggaagagaacccgcaatac
agtgctctcgtgaagcagctcggtttgtcacaaaagcagctggtggaggcagcgaacttc
acaaatgagaaatatcctgatgtgtctttggagttcgacgttgaggaccctgagagcctt
caagctggtgaaccgtcatatctcaatattcggatcgaacgagagatcgaggacgacgat
tttgatcctaccgtccacgcccctttctacccatccaagaagatggagagctggtggttg
gttgtcggtgaagaaaacactaagacgctactcgccatcaagagaatcaccttcggacag
aagcttaatgtccgtcttgaatttactgttcctacccccggcgagcatgatttgaagttg
ttcctcatgagcgacagctatgttggcgtggaccaggagccaggcttctccgttaccgtt
gcggaggctatggaggtggatgaagatgatgatgaggatgaggatgacgaggagtga
DBGET
integrated database retrieval system
