Phaeoacremonium minimum: UCRPA7_2797
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Entry
UCRPA7_2797 CDS
T03102
Name
(RefSeq) putative exosome complex exonuclease rrp43 protein
KO
K12586
exosome complex component RRP43
Organism
tmn
Phaeoacremonium minimum
Pathway
tmn03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tmn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
UCRPA7_2797
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tmn03019
]
UCRPA7_2797
Messenger RNA biogenesis [BR:
tmn03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
UCRPA7_2797
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Lip_C
Motif
Other DBs
NCBI-GeneID:
19323081
NCBI-ProteinID:
XP_007913599
UniProt:
R8BQN0
LinkDB
All DBs
Position
Unknown
AA seq
257 aa
AA seq
DB search
MRVTCAPLLNSADVRREGAKELKDYDLLVPNVELATGSAPEFLPGVPPTTLAQTLSTKVF
SLLHTSRLVDAQDLRIWYKQPSLQEDDRMDEDGNDDEDADDEQSELKAYWTLYIDVLFIS
FDGNPFDAAWAAIVAALRDTKLPRAWWDADREIVICSRSEEMPLNISGLPVACSAAIFTE
KEAEKASQGKHWVLVDPDRLEESLCDEVITMVVDKSGGQTRIRNLSKSGGTIIGPQLLRD
FTNLAGARWEEFRKAIQ
NT seq
774 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgtcacatgcgcgcccctgctcaattcagccgatgtgaggcgagaaggtgcgaag
gagctcaaggactacgacttgctcgtgccgaatgtggagctggcaactggaagtgctcct
gaattcctaccgggagtgcctcccacgactctcgcacaaacattgagcacgaaggtgttc
tctcttttgcacacatctcggctagtggatgcccaggatctacggatatggtataagcaa
cccagtttacaggaggacgaccgcatggacgaggatggcaatgacgacgaggacgcggat
gacgagcaatcagagctcaaggcatattggacgctctacatcgatgtgctattcatttcc
tttgacggcaaccctttcgatgcggcctgggctgcaattgtcgccgccctacgagacaca
aaattgcctcgagcttggtgggatgcggatcgggagatagtcatatgttctcgtagtgaa
gaaatgcctctaaacatcagcgggctacccgtcgcgtgcagcgcggccatcttcaccgaa
aaggaagccgagaaagcttcgcagggcaagcattgggtgctcgttgacccggacagactg
gaagaaagcctttgtgatgaggttatcaccatggtggttgacaaaagtggtggacaaaca
agaatacgaaacttgtctaagagtggaggcaccattatcggcccacagttgttgagggat
ttcaccaacctagctggagcccgatgggaggaatttcgcaaggccatacaatga
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