Phaeoacremonium minimum: UCRPA7_3405
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Entry
UCRPA7_3405 CDS
T03102
Name
(RefSeq) putative dna damage-binding protein 1 protein
KO
K10610
DNA damage-binding protein 1
Organism
tmn
Phaeoacremonium minimum
Pathway
tmn03420
Nucleotide excision repair
tmn04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
tmn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
UCRPA7_3405
09124 Replication and repair
03420 Nucleotide excision repair
UCRPA7_3405
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tmn04121
]
UCRPA7_3405
03400 DNA repair and recombination proteins [BR:
tmn03400
]
UCRPA7_3405
Ubiquitin system [BR:
tmn04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Adoptor protein
UCRPA7_3405
DNA repair and recombination proteins [BR:
tmn03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
UCRPA7_3405
TCR (transcription coupled repair) factors
Cul4-CSA complex
UCRPA7_3405
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_RSE1_1st
CPSF_A
Beta-prop_RSE1_2nd
Motif
Other DBs
NCBI-GeneID:
19323751
NCBI-ProteinID:
XP_007914043
UniProt:
R8BP49
LinkDB
All DBs
Position
Unknown
AA seq
1046 aa
AA seq
DB search
MAYIAPIHRPSSVRHALQLKLLSEDEDSLVLAKANRIEIWRLAEDHLVMVHSKVVHGTIS
MLQKLRPKDSSTDLLFVGTDRFQYFTLSWNPQTSQLDTVQTFEDMGEKHMRDSQSQDKCL
VDPTGRFMALHLWEGVLTVLRLLSRKGTTLNLQWMEQVRLSELFIKASTFLPSETHPKLA
FLYQTRTDNPDSKLATYQLTGNDADNSASKFDPTRDREISIDVPDPGAAILIPVRRVSEE
QKRHNFRNVATARAHLGGLLVVGETRLLYIDQVTKVQVEAPLKEASIFVAWAEYDERNYF
LADDYGRLHLLTINTDGSAVTGMQVTYIGKTARASSLVYLGDNILFVASHYGDSQLYRTD
FSEDAAQFLHLLQTLPNIGPVLDFTVMDMGNREGDSQLGNEYSSGQARIVTGSGAYKDGS
LRSVRSGVGLGDIGILADLKGVRDGKSLISLNIEKDLLVSGQNDVAENDQVACIHVAPDL
LDIGVIGFWTSGSLSIVDLATLHPHRGEPLRRTDDNASIPRDIVLTQVLPPAVGGPTLFV
AMEDGNVITYNFSTTDVTLSGRKSVVLGTRQARFHLLPLADGTSNIFATTEHPSLIYGSE
GRIVYSAVTAEDATCICPFDTEAFPGSIAVATESQIKISQIDTERRTHVRSLEMGETIRR
IAYSPKEQVFGLGCIKKELVHGEEVISSSFKLVDEVIFDNLGKPFILNTAPATELIECVI
RATLSDAYGNPAERFLVGTSFIEDGEIASQQSEFRGRLLVLGVDSDRSPYQIMSHNLKGA
CRSLAVMDDMIVAALTKTVVVSKYAEQSTTSATLTRVASYRPSTYPIDLAVEGNIIAVAD
LMKSLSLVELVPAKDGMEPQLIECARHYQSGWATAVSHIEENSWLEADAQGNLMVLRRNP
TGVTMEDQRRMEITSEINLGEMVNRIRKIAVETSPDAMIIPKAFLGTVEGAIYMFGTIAP
QAQDLLMRFQAKLTTMVKTPGNIDFKSYRAFRNAEREGDGPFRFLDGELLERFLDVDEEI
QEEICRGLGPSVENMRNIVEELKRMH
NT seq
3141 nt
NT seq
+upstream
nt +downstream
nt
atggcctacatcgcacctattcaccggccgagcagcgtccgccatgcgctgcaactcaag
cttctgtcagaagacgaggacagcttggtcctggccaaggccaaccgcatagaaatatgg
cgtctcgcagaggaccacctggtcatggttcactcgaaagtcgtccatggcacaatctcc
atgctccagaagctgcgaccgaaagactcgtcgaccgatctcctcttcgttggcaccgac
cgatttcagtacttcacactctcgtggaacccccagacaagccaattggacactgtccaa
acttttgaggacatgggggagaagcatatgcgtgattcacagagccaggacaaatgccta
gtggaccccacagggcggttcatggcactccatctttgggaaggcgtcttgacagtcctg
cggctcctctcaagaaagggtacgaccctgaacctgcagtggatggagcaggtcagactc
tcagagctattcatcaaagccagcacatttctcccctccgaaactcaccccaagctcgcc
ttcctctaccaaactcgtaccgacaatcccgactcgaagctggccacgtatcagcttact
ggaaacgacgcggataattcggcatcgaaatttgaccctactagagatagggaaatatct
atagacgtacctgatcctggagctgcaatcttgatacctgtgagaagggtcagcgaggag
caaaaacggcataatttccgcaatgtggctactgctagagcgcacctcgggggcctgctc
gtcgttggggagacacgcttgctctatatagatcaagtgacgaaggtccaggttgaagcg
ccgctgaaggaggcgtcaatatttgtggcgtgggcggaatatgacgaacggaattacttc
ttggcagatgactatggaagattgcacctgctcactatcaacacggacgggtccgctgtg
actggcatgcaggtgacctacataggcaaaactgcgagagcaagctctcttgtctacctt
ggcgacaacatattgttcgttgcatcgcactacggagattcacagctctaccgtaccgac
ttctccgaagatgcagctcaatttctccatttacttcagacactgccgaacattggacct
gttctcgacttcactgttatggatatgggcaaccgagaaggcgatagccaactgggcaac
gagtattcttctggtcaagcccggatcgtcactggcagcggagcttacaaggatggtagc
ctgcgaagtgttcgcagcggcgttggtctaggagacattggcattctcgcggatctcaaa
ggcgtcagggatggcaaatcactcatctccctgaacattgagaaagaccttttggtctca
ggacagaacgatgttgctgaaaacgaccaggttgcttgcattcacgttgcaccagatctc
ctcgacatcggcgtcataggcttctggacgtccggttccttgtcaatcgtcgacttagct
actttacatccccacaggggtgagccgttgcgacgaacagatgacaatgcctcaatacca
cgagacatagttttgacccaggtattgccacccgcagtcggtggtccaacgttgtttgtc
gctatggaggatggcaatgtgatcacctataacttctcgactacggacgtcaccttgtct
ggtcgcaagagcgtcgtccttggtacgagacaagcaagattccacctcctcccactcgca
gatgggacgtccaatatttttgcgactacggagcaccctagcttgatctatggttcggaa
ggaagaattgtgtactctgcggtcaccgctgaagatgcaacttgtatctgccccttcgat
acagaggcttttcccggctcgatcgctgtagcgacagagtcccaaataaagatttctcag
atcgatacagagaggcgcactcatgttcggtctctagagatgggtgagacaattcgccgc
atcgcctattctcccaaggaacaagtctttggtctcggatgtatcaagaaagaacttgtc
catggcgaggaggtgatctcaagctcattcaagttggttgacgaggtcatatttgacaac
cttggcaaaccattcattttaaacactgccccagcaacagaattgatagagtgtgtcatt
cgagcaacactctcggatgcttatggcaatcccgcggaacgattccttgttggtacaagc
ttcattgaagatggcgagattgcctcacagcagtctgaattccgcggacgacttctagtt
cttggcgtggacagcgataggagcccttatcagatcatgagccacaacttgaagggagcg
tgtaggtctctggcggtaatggacgacatgatcgttgcggcgctaacgaagacggtcgtc
gtgagcaagtatgctgagcagtccacgacctcggcgacactgacaagggttgcctcatac
cgtccttccacctaccctatagatctagctgtcgaaggcaatataatagccgttgccgac
ctgatgaagtcgctctcgttggtagagttggtaccagctaaagatggtatggagccgcaa
ttaatcgagtgtgcacgtcattaccagtctggatgggccacagcagtatctcatattgaa
gaaaactcatggctggaagcggatgcgcagggtaacctgatggtactgcgaaggaatccc
accggtgtgaccatggaggatcagagacggatggagataacgagcgagatcaacctcggc
gagatggtaaatagaattcgcaagatcgctgtcgagacaagtccggatgccatgatcata
ccaaaggcattcctgggcacggtcgagggcgcaatctacatgtttggaactatcgcgccg
caggcacaggacctgctcatgcggttccaggcgaagctaactacaatggtgaagacaccg
ggcaacatagacttcaagtcttacagagcatttagaaacgcggaacgagaaggcgatggc
ccatttcgattcctagatggggaattacttgagagatttctagacgtggatgaggagatc
caggaagagatatgtcggggcctggggccaagtgtcgagaatatgcgaaacattgtggag
gagctcaagaggatgcattag
DBGET
integrated database retrieval system
