Phaeoacremonium minimum: UCRPA7_3819
Help
Entry
UCRPA7_3819 CDS
T03102
Name
(RefSeq) putative transcription initiation protein spt5 protein
KO
K15172
transcription elongation factor SPT5
Organism
tmn
Phaeoacremonium minimum
Pathway
tmn03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
tmn00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
UCRPA7_3819
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tmn03021
]
UCRPA7_3819
03019 Messenger RNA biogenesis [BR:
tmn03019
]
UCRPA7_3819
Transcription machinery [BR:
tmn03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
UCRPA7_3819
RNA polymerase I system
UCRPA7_3819
Messenger RNA biogenesis [BR:
tmn03019
]
Eukaryotic type
mRNA processing factors
3' end processing
DRB sensitivity inducing factor (DSIF) complex
UCRPA7_3819
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spt5-NGN
Spt5_N
KOW5_SPT5
KOWx_SPT5
KOW4_SPT5
KOW2_Spt5
KOW1_SPT5
KOW
DUF3912
CTD
KOW6_SPT51-2
Motif
Other DBs
NCBI-GeneID:
19324205
NCBI-ProteinID:
XP_007914508
UniProt:
R8BN40
LinkDB
All DBs
Position
Unknown
AA seq
909 aa
AA seq
DB search
MASSDPNRYDDSESDDDNFNPAPADVSDEEPARDEDDEVPGQRSRDDAARSSPTADEDGD
DDEDEVRATNGKSKASNKGDDDEDAENGEDDDEDGGSRRRRNDDDEDDEEDEDDEDDDDD
DDVQGGHRRKRRRDRRNAFFDIEAEVDDEDEGEDDEKDGEEIEDFIDNAHPDDLAETGRI
NDDRYHRELDRRKEMEDSVDAEQLAENLRQRYGNRRPARGFGDSAVVPKRLLLPDVMDPS
IWAVRCKEGKEREVVFSIMKKIEERMNTKDELAITSAFERGGPQSVMKGYIYVEAQRQTD
ILLALDGMLNVYPRTKMLLVDIKDMPDLLRVTKTPNLEPGAWVRLRRPAKHAGDLAQVLD
VTENGLEVRVKFIPRLDYGLRDEAIANAQMTPDGKRKRAPGMPGPRPPQRLFSEVEARKR
HPRHIQGNPQTNTWTYNGDEFENGFQVKDIKIQQLVVKDINPTLEEVTKFASSSEDGAEN
LDLKALAASLKDSNLNVTYLPGDIIEVYEGEQRGVVGKATNVQGDIVTLQVTEGELSGQT
IEVPTKGLRKRFRPGDHVKVIGGSRFRDEVGMVVKISDDRVTLLTDQTNTEVTVFSKDLR
EADDIGGQGSLGQYSLLDLVQLDVTTVGCIVKVDRESLVVLNQHGDTRQIMPSQISNKLE
KRKTTVAADRNGSEIRLDDVVKEYGGQQRQGKIIHIHRSYLFLHSNDNHENAGVFVTRAS
NVSTIAAKGGRVNAPSTAGPDLSTMNPALKRNPNGNGNAMTAPPRVFGRDRALGQTVTVR
KGGYKGLLGIVKDTTDTHARVELHTKGKIITVPKADLSFKDKVTGRVIDINGRGGHGGGR
GGFGGGNRGGFGNNDREPSWQGGRTPTVTSGSERTPAWGSSKGKSRYGTSHYFMKLILNS
NFAYSCLEP
NT seq
2730 nt
NT seq
+upstream
nt +downstream
nt
atggcgtccagcgacccgaatcgttacgacgattccgagtccgacgacgacaacttcaac
ccggcaccggcagacgtctcagacgaggaacccgcccgcgatgaggacgatgaggtgccc
ggacagcgatcccgcgatgatgctgcgcgaagcagccccacagccgacgaggacggcgac
gacgatgaagacgaggttcgcgccactaacggcaagtcgaaggcctcgaacaaaggcgat
gatgacgaggatgccgagaatggcgaggatgatgatgaggatggtggaagtcgtcgacgg
agaaacgacgatgatgaagatgacgaagaggatgaggacgacgaagatgatgatgacgat
gacgatgtccaaggaggtcatcgtcgcaagcgccggcgagacaggcgaaatgccttcttc
gatatcgaagccgaggtcgacgacgaggatgagggcgaggatgacgagaaagacggcgag
gagatagaggacttcatcgacaacgcgcatccggatgaccttgctgagaccggtcgcatc
aatgatgaccgataccatcgagagcttgataggcgcaaggagatggaggacagcgtcgac
gcagaacagctcgcggaaaatcttcgacagagatatggcaatcgacgccctgcgcgcggc
ttcggcgactccgccgtcgtgcccaagcggctcctgctccccgatgtcatggaccccagc
atctgggcagtacgatgcaaggaaggcaaagagcgggaggttgtcttttccatcatgaag
aagatcgaggagcgcatgaacaccaaagatgagcttgcgattacctcggcatttgaacgt
ggtggtccacagtcggtgatgaaggggtacatctacgttgaggctcaacgacagactgac
atcttgcttgccctcgacgggatgcttaacgtgtatccccggacgaagatgctgcttgtc
gacattaaggacatgcctgatcttctgcgtgtgacgaagacgcccaatctggaacccggc
gcatgggttcgcctaaggcggccagccaagcatgccggcgatcttgcccaagtccttgat
gtcaccgagaatggtctggaggtacgagttaagttcatcccacgtcttgattacggcctt
cgtgatgaggccattgcgaatgcgcagatgaccccggatggcaagcgaaagcgtgcgcct
ggcatgcctggacctcgccccccacagaggctcttcagcgaggttgaagccaggaaacgc
catcctcgacacatccagggcaatccgcagaccaacacctggacttataacggggatgag
tttgagaacggcttccaggtcaaggacatcaagattcagcaattggtcgtcaaagacata
aaccctacgctcgaggaagttacgaagttcgcatcgagctctgaggatggtgccgagaac
ctggacctcaaagccctcgcggccagtttgaaggatagtaacctgaatgtcacctatcta
cctggtgatattatcgaggtttatgagggcgaacaacgaggtgttgttggaaaggcaacc
aatgtgcaaggcgacattgttacgctccaagtcacagagggcgaactttccggacaaact
atcgaagtgcctacaaagggtcttcggaaacgcttccgacctggtgaccacgtcaaggtt
attggtgggagccggttccgtgacgaagttggtatggtagtcaagatttctgacgatcgc
gtcactcttctgacagatcagacgaatactgaggttaccgttttcagcaaggacttgaga
gaggcagatgatattggtggccagggctcactcggccagtactctctgctcgacctggtt
caactggatgttacgaccgttggctgcatcgttaaggttgatcgcgagtctttggtagtc
ttgaaccagcatggcgacaccaggcagattatgccatcccagatctccaacaaacttgaa
aaacgtaagacaactgttgctgctgatcgtaatggatcagagatcaggttggacgacgtc
gtcaaggaatatgggggccagcaacgccaaggcaaaattattcacattcatcggtcatac
ctgttccttcacagcaacgataaccacgagaacgccggagtgttcgtgacccgtgctagc
aatgtcagtaccattgctgcgaagggtggtcgcgtcaacgctccgtctaccgctggtcct
gatctgagtacgatgaaccctgccctgaagcgcaaccctaacggaaacggcaatgctatg
acagcgcctcctcgggtctttggtcgcgatcgggctcttgggcagactgttaccgtgaga
aaaggcggctataaaggtcttcttggtattgtcaaggacaccaccgacactcacgctcgt
gtagagctacataccaagggcaaaatcatcacagtaccaaaagccgatttgtcattcaaa
gacaaggttactggccgtgtcatcgacattaacggcagaggaggccacggtggcggccgt
ggcggtttcggcggtggaaatcgtggaggatttggtaataatgatcgtgaaccgagctgg
caaggcggtcgtactcctactgtgacttcaggctccgaacgaactccggcatggggttct
tcaaagggtaagtcaaggtatggcacatcgcattacttcatgaagctaatcttgaacagc
aacttcgcatactcctgcctggagccgtaa
DBGET
integrated database retrieval system
