Phaeoacremonium minimum: UCRPA7_4030
Help
Entry
UCRPA7_4030 CDS
T03102
Name
(RefSeq) putative u3 small nucleolar rna-associated protein 20 protein
KO
K14772
U3 small nucleolar RNA-associated protein 20
Organism
tmn
Phaeoacremonium minimum
Brite
KEGG Orthology (KO) [BR:
tmn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tmn03009
]
UCRPA7_4030
Ribosome biogenesis [BR:
tmn03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
UCRPA7_4030
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UTP20_N
UTP20
UTP20_C
HEAT
Htt_N-HEAT_1
Motif
Other DBs
NCBI-GeneID:
19324440
NCBI-ProteinID:
XP_007914778
UniProt:
R8BM77
LinkDB
All DBs
Position
Unknown
AA seq
1869 aa
AA seq
DB search
MMTIRLSPVWDEAIEAMKAIATTKTADDVISSLAFEWLDVPSPKWEGRSNEVVGTKRYGL
TDFECQNFDRLRDVAKETTRLIDDPTDVMLQTFEDRQEIVLARPENARHKALKILTAIPA
VAEKRSRKLVPYLFAVSDSGDAFADEEDGEETIQQEAWFLTDKKALIGVFAQFINPKVLY
QSSRVYNALLTFMANRDIEVQKLALKAILTWKLDGIKPYQEHLEYLLDEARFKNELTVLF
QGDQKIQPEHRAELMPVLLRLLYGRAISKKGAASGRNGLHATRLAVIRNLSVEDLGGFIE
IALGDLWQIRIVDDSGLQETAFKNEVVSARKQVGVLNMTESIINELGTDVSVYMEPLVNA
VLYCLISTCRKLQATNEDNDEEDGERSENSLLKVARTTSLKCLCALFRNNTSFDWTPYRE
HMVSEAISPRIEKLALETTQGVSWTWRILETWSLLPRNALFLSLDQRIIPEITKSLSIEK
GKDEPKIFALGIIRNLVKLAQAPAAESEFNELIQAELLDPNIDGILGAISHVLREQHDIG
RNLLEACVDTVVELSPLVKESKNVENLLDISTYLLQQPLRRVNPKVKGSILLILEHFIVL
DDLQRNIELKQTVYHTLASLFSFFKDKQNRESLSRVLIVFAAQETSLQEVAKLCADLNSY
VEGRLDEPDYDKRLAAFRSITREREVQLTVEQWLPLLNNMVFFLRQDEEFGILSTNAADV
LCTFVNAAVSAWDLPSKSPYVTQLSDVILPAIYAGVREPSEAVRREVLRLLGHLVTQLGV
WEPLSDLTSLAPAKDEESDKAFFFNILTPAVSRQVQALQLLVSVNERSPFSSKNVSQIFI
PLLEHFIFGREEGSDDQGLGAQATSTIASLSVSLDWSQYRAILRRYIGFLESKPELQKQV
IRLLDKVADSLVFAKEHGTETKMDLDQSESGQVKYRLATTLPNETKIGEEVSNNFLPLML
KHLHDKDEETVSARVPVAVIIVKLLTILPENMLNTKLPGVLTDICHILRSKAWESREMSR
STLAKIACILGPGSFGFILKELRGALTKGYQLHVLSYSLHTLLLAVIPEFAPGELDYCLD
SIMAIIMDDIFGATGQEKDAEEYVSKMKEVKSSKSQDSMELIAKNASVNQLASLIRPLQS
LLSEKLDVRTVRKIDELLNRISSGILQNRSAESRDTLVFCYEVIQDVYKAQKPRAEAQID
PRVKRYLVQKWVRNTTKGEKYTHKLIRFSIDVLRSVLRKHDSLRNAANVSGFLPILGDAV
VAGEEEVKVAAFKLLVVLIKVPFKTTESADLYKVAFKEALKSISISITTTSDIAQTALKL
CSQVIRDRREIPIKDAAVDMLLGKLKDDLTQPLYRHVTFNFLRSVLDRKVETATVYDTLD
YVGTIMITNDDKDTRDLARGAYFQYLREYPQQKKRWTKTKEFVVANLKYQREGGRLSVME
IIHLLLMKTADDFVQEVVATCFIPLVFVLANDESERCRLAAGELIKEIFRKADKERLQKF
LTLLRSWISQDENAAVLKLALEAFSFYFAAKEESVKDKRDIELVIKKITGVLGETQSDWE
LSNTGLRVVQTLLGNFPAKILSQDSQELWTVVISSLAHPREEVVLSSIKLLGLYLADFAS
NAASGSEAQTLKGSYGLTLDQDQTTQLVRHMLDVLSGLEVEEGLAAEAARILLFLGAFLD
SDVDASDLEERDEDDDFFKDEEVDVTMGYVFSKLSAIVRRETPPRASALVGKLAAIEALE
AFCIKATKEDIKASVRTILRPLRHLTDPSIRPPYVLDETFKSRYESLKTKAQSIMELLQQ
KLGASDYTKDLLAVGEEIKDRRQQRSSKRKIEAITQPEKFGREKRKKMDKKKERKKAKGQ
EHRNHRRGY
NT seq
5610 nt
NT seq
+upstream
nt +downstream
nt
atgatgaccatacggctctctcctgtgtgggatgaagcgatcgaagcgatgaaggctatt
gctactaccaagactgcagacgacgtcatctcaagccttgcgtttgagtggcttgatgtt
ccttcgcccaaatgggagggtcgttcgaatgaggtagttggtaccaagagatacggacta
actgattttgaatgccaaaatttcgaccgattgcgagacgtggccaaagaaactactcga
cttattgacgatcctaccgatgttatgctccagacattcgaggacaggcaggaaatcgtg
ctggcccggcccgagaacgcgagacacaaggctctcaaaattctcacagccatcccggca
gttgcggagaaacgatctcgcaagctggtgccctatctcttcgctgtgagtgatagcgga
gacgcattcgcggatgaagaagacggagaggagacgatccaacaagaagcttggtttttg
acagacaagaaggctcttattggtgttttcgctcagtttatcaatcccaaggttttgtat
cagagctcgagagtgtataatgctctgctgaccttcatggcaaatcgcgacatcgaagtt
cagaagcttgctcttaaagcaatcctgacctggaagctcgacggcatcaaaccataccaa
gagcatctagagtatctcttagacgaagcaagattcaaaaacgaactcactgttctgttc
caaggagatcagaagattcagccggagcatcgtgctgagttgatgcctgttttgctcaga
cttctttacgggcgggcaatttcaaagaaaggagcagcaagtggacgaaatgggttgcat
gcaacacgactcgctgtcatccgtaacctgtccgtggaagatcttggcgggtttatcgag
atcgctctgggagatctttggcaaatccgcatcgtcgacgattccggccttcaagaaacc
gcattcaagaacgaggttgtatcggcccgcaaacaggttggtgtgctgaacatgaccgag
tctattatcaatgagctgggcacagacgtctcggtttacatggaacccttggtcaatgcg
gttctatactgcctcatttcaacatgccgcaagttgcaagcgaccaatgaggataacgat
gaagaggatggcgagcgtagcgaaaactctctcttgaaagtagcaagaacaacatcgttg
aaatgtctgtgtgcattgttcagaaacaatacttcgttcgactggacaccctaccgggaa
cacatggtctcggaagcaatcagtcctcgaattgagaaactcgcgttagagacaacacaa
ggtgtgtcgtggacctggagaatcctggagacgtggtcactgctaccgcggaatgcactc
tttctctcgcttgatcagcgaatcatccctgagatcaccaagtcactttccatcgagaag
ggcaaagacgagcctaagatctttgctctgggaatcatcagaaacctagtgaagcttgca
caagccccagctgccgagtcagaattcaacgaacttattcaagcagaattgttggatcca
aacatcgatggaattcttggcgcgataagccatgtactccgcgaacaacatgatattggt
cgcaacctcctggaggcctgcgtagatactgtggtggagctctcgccattggtgaaggaa
tctaagaatgtggagaatctgcttgatatttccacatatctgctgcaacaacctctccga
agagtcaatccaaaggtgaaaggctcaatcctccttattctcgagcacttcatcgttcta
gatgatttacagcgcaatattgagctgaagcagaccgtctaccatacattagcgtccttg
ttcagtttcttcaaggataagcagaacagagagtcactctcacgagtattaatcgtgttt
gcggctcaggagacgtcgctgcaggaggttgcgaaactttgtgcagacttgaactcatat
gtggaaggcaggttagatgagccggactacgacaagcgtcttgctgctttcagaagcatc
actcgcgagcgcgaggtccagctcactgttgagcaatggctaccattgttgaacaatatg
gtgttcttccttcgtcaagatgaagaatttggtattctgtcgaccaacgcagccgatgtt
ttgtgcacatttgtgaatgctgcggtttctgcctgggatctgccatcaaaatccccatat
gtcacacaactttctgatgtgatcctgccagcaatctatgccggcgttcgtgagccatca
gaggctgttcgacgcgaggtattgagactcctcggtcacctggtcactcaactgggagtt
tgggaaccattgagtgatctcacttcactagcgccggcgaaagacgaggagtcagacaag
gcattcttcttcaacatcctcacaccggctgtctctagacaagttcaggcacttcaactt
cttgtatcagtgaatgaacgctcgccgttcagcagcaagaatgtcagtcagatattcatt
ccactgttagagcacttcatcttcggacgtgaggagggtagcgatgatcaaggactagga
gctcaggcaactagcactattgctagcctgtctgtgtctctcgattggtctcaatacagg
gctatcctgcgacgatacatcggcttcctcgaatcaaaaccagagttgcagaagcaagtg
atacgactcctggacaaagtcgctgattcgcttgtttttgccaaagagcatggcaccgaa
acaaaaatggatctcgatcagtcagagtctggccaagtcaagtaccgcttggcgactact
ctccctaacgagacaaagattggagaggaagtttccaacaactttctgccgttgatgttg
aaacacctacacgacaaagacgaagaaactgtcagcgccagagttcccgtcgctgtgatt
atagtcaaacttctgacgattctacccgagaacatgctcaatacaaaattacccggagtt
ctgactgatatatgccatattctgcggtcgaaggcctgggagtctcgagaaatgtccaga
agcactttggccaaaattgcgtgcatacttggacctggctcttttggtttcattctgaag
gagcttcgaggagctctgaccaagggctaccaacttcacgtgctttcatattctcttcat
acacttctcctcgccgtgataccggaatttgctccaggtgagctcgactattgtcttgat
tcaatcatggccataattatggacgacatctttggtgctacgggccaagagaaggatgcc
gaagaatacgtgtctaagatgaaagaagtcaagagcagcaaaagtcaggactcgatggag
ctgatcgccaagaatgcatctgtcaaccagctcgccagcctaatcaggcccctacagtct
ctcttgtccgagaagctagacgtgcggactgttcgcaagatcgatgagctactgaatagg
atctcgtctggtatcctacagaacagatctgctgagagccgagacactctggtgttctgt
tatgaggttattcaggacgtttacaaggcccaaaagcctcgagcagaagcccaaattgac
ccaagagtcaaacgatatttggttcaaaaatgggttcgcaatactaccaaaggcgaaaag
tatacacacaagctcatccgattctcaatcgatgtccttcgctctgtgctccggaagcat
gacagtctaaggaacgcagctaatgtcagtggcttcctgcccatactcggtgatgcggtc
gttgctggtgaagaagaggtcaaggtcgccgccttcaagcttctcgtcgtcttgatcaag
gtcccattcaaaacgactgagtcagccgatctctacaaagtcgccttcaaagaagcgctc
aagtcgatttcaatatccatcacaactacgagcgatattgcgcaaacagccttaaagctc
tgctcccaagttatcagagaccgccgagagatacctatcaaggatgccgcagtcgacatg
ctgctggggaagctgaaggatgacctcacacaaccgctttacagacatgtcacctttaac
tttctgagatcagtccttgaccgtaaggtcgagaccgcaactgtatacgacactcttgac
tacgttggcacgattatgattacgaatgatgataaagatacccgtgatctagcgcgagga
gcgtactttcagtatctccgagaatatccacagcagaaaaaacggtggacaaagaccaag
gagttcgtggttgccaacctcaagtatcagcgagaagggggtcgtctgtcggttatggag
atcatacatcttctgctcatgaagactgcggacgattttgtccaggaagtggtcgccacc
tgcttcattccgttggtctttgtcctggcgaacgatgaaagcgagcgttgtcgccttgcc
gcaggcgagctgatcaaggagatattcaggaaggctgataaggagcgtttgcagaagttc
ctcacactcctgagatcttggatcagccaagatgagaatgccgcggtgctcaaactcgct
ttggaggccttttcattctacttcgctgcaaaagaggaaagcgtcaaagataaaagggat
atagagctcgtcatcaagaaaatcactggagtgctgggtgaaacgcagtctgactgggaa
ctctcgaatactggcctcagagttgtacaaactctcctaggcaacttcccagcaaaaata
ttgtctcaggactcgcaagagttatggactgtcgtcatctcttcgttggcgcatcctagg
gaagaggtcgtgctcagttctataaagcttttaggcttgtatctcgccgattttgccagc
aacgcggcgagcggctcagaagcccagactttgaagggctcctatggccttaccttagac
caggaccagaccacacaactcgtccgtcacatgcttgatgttttgtcaggccttgaagtt
gaagaggggttagcggctgaggctgctcgaattcttcttttccttggcgcttttctcgat
tcagatgtcgacgcttccgacttagaagagcgtgacgaagatgatgatttcttcaaggac
gaggaagtcgatgttaccatgggatacgtgttctctaaactatcggccattgtgagaaga
gagacgccaccacgagcgtcggctttggttggcaagctagctgcgatcgaagcgctcgag
gcattctgcatcaaagcaaccaaggaggacatcaaggcctctgtccggacgatcctcagg
ccattacgccacctcacagatccttccattcgccccccttacgtccttgatgagaccttc
aagtctcgatacgagtctcttaagactaaagcacagtctattatggagctactgcagcag
aagctgggagcctcagactacacaaaggacctcctcgcagtaggcgaagagatcaaagat
aggagacagcaacgctcaagtaagcgcaagatcgaagcaatcacccagcctgagaagttc
ggcagggagaagaggaagaagatggataagaagaaagagaggaagaaggccaagggccaa
gaacaccgaaatcacagaagaggctactga
DBGET
integrated database retrieval system
