Phaeoacremonium minimum: UCRPA7_4098
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Entry
UCRPA7_4098 CDS
T03102
Name
(RefSeq) putative histone deacetylase protein
KO
K11407
histone deacetylase 6 [EC:
3.5.1.98
]
Organism
tmn
Phaeoacremonium minimum
Brite
KEGG Orthology (KO) [BR:
tmn00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
tmn01009
]
UCRPA7_4098
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tmn03019
]
UCRPA7_4098
04131 Membrane trafficking [BR:
tmn04131
]
UCRPA7_4098
03036 Chromosome and associated proteins [BR:
tmn03036
]
UCRPA7_4098
Enzymes [BR:
tmn01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
UCRPA7_4098
Protein phosphatases and associated proteins [BR:
tmn01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
UCRPA7_4098
Messenger RNA biogenesis [BR:
tmn03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
UCRPA7_4098
Membrane trafficking [BR:
tmn04131
]
Autophagy
Aggrephagy
Other aggrephagy associated proteins
UCRPA7_4098
Chromosome and associated proteins [BR:
tmn03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
UCRPA7_4098
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Arb2-like
Hist_deacetyl
Peptidase_M61
Motif
Other DBs
NCBI-GeneID:
19324514
NCBI-ProteinID:
XP_007914843
UniProt:
R8BM40
LinkDB
All DBs
Position
Unknown
AA seq
742 aa
AA seq
DB search
MDDNDNDVVMDGEEHRINSHSAQNGFHYSGDFDMGLESASPDGQSDLDESEEEEDPTAYP
QDLRRKGLLPTGCCYDVRMKLHANADFGPNPHHPEDPSRIDAIMNAFKRNGLVYSGPPEK
EIDVINTNPTQYMWRIPAREATQDEICIVHRPEHYEWVKDLDNKTTQDLRRLTKILDSGR
DSLYVGSMTFPAALISAGGAIETCKSVVNGNVKNAFAVIRPPGHHAEFDSPMGFCLFNNV
PIAAKICQQQFPDLCRKILILDWDVHHGNGTQNMFYNDPNILYISIHVYINGTFYPGKPD
NPMTPDGGIENCGTGAGLGRNVNIGWHDQGMGDGEYMAAFQKIIMPIAQEFNPDLTIISA
GFDAADGDELGGCFVTPACYAHMTHMLMSLSNGKLAVCLEGGYNLRAISQSAVAVARTLM
GEPPPMMTIPKINKEAARLLAKVQAHQAPYWECMRPGIVDVQDIQSLGGVRLHDVVRTYQ
RQMLSQNFGMIPLYIQRETLFKSYENQVLITRGVHESRRLLMIIHDPPALLAQPDSLDNS
IEAHNGWVADGVTQYIEWAVAQKFGVMDINIPYYVTHPEDTDPFTQRTDERAMQLQIQEL
VCYIWDNYLQLWDNVEEIFLMGVGFAYLGVKTLLISRDCKSRISGVVNFVNGTLRPVKSD
VDQELSSWYKENSRVFVADDHACWNDSDLTRKVSKKRFGAVVHSPHHGLNRMMRAHAGEV
YNWILDRVVDGHGDTTEEDKVN
NT seq
2229 nt
NT seq
+upstream
nt +downstream
nt
atggacgataacgacaatgatgtggtgatggatggtgaggagcatcgcatcaatagtcac
tctgcccagaatggtttccactactctggagactttgacatgggcctcgaaagtgcctct
cctgacggtcaaagcgatcttgatgagtctgaggaggaagaggatcccactgcctaccct
caagacctgcgacggaagggtctccttcctacgggctgctgctacgatgttcggatgaag
ctccatgccaacgccgacttcggtccgaatcctcatcatcctgaggatccctcaagaatt
gatgccatcatgaacgcgttcaagagaaatggccttgtctactccggacctccagagaag
gagattgatgtcattaataccaatccgactcagtacatgtggaggattccggcacgtgaa
gcaacccaggatgagatttgtattgttcatcgcccagagcactacgaatgggtgaaggat
ctggacaacaagaccacccaggatcttcgccgattgaccaagatccttgactctggcagg
gactcactgtatgttggctcgatgacatttcctgctgctttgatctctgctggcggcgcc
attgagacatgcaagagcgttgtcaatggcaatgtcaagaacgccttcgcagtcatccgt
ccaccaggccatcatgcagagttcgactctcctatgggcttctgcctcttcaacaatgtt
ccgatagcagcaaagatctgtcaacaacaattccctgacttatgtaggaagattctcatc
ctggactgggacgtccatcatggaaacggcacgcagaacatgttctacaacgaccctaac
attctctacatctccattcacgtctacatcaacggcactttttacccaggaaaacctgat
aaccccatgacacctgacggcggtatagaaaactgcggcacgggtgcaggcctaggaaga
aatgtcaacattggctggcacgatcaaggcatgggcgatggtgaatacatggctgcattc
cagaagatcattatgcccatcgcgcaagagttcaatccggatctgacaatcatttcagct
ggtttcgatgcagctgacggagatgagcttggcggatgcttcgtcacaccagcatgttat
gcgcacatgactcacatgctcatgtctctttcaaacggaaaattggccgtttgcttggag
ggaggatacaacctgcgcgccatctcgcaatctgctgttgctgttgcaagaaccttgatg
ggagagccaccgccgatgatgacaatacccaagatcaacaaggaggcggccagacttctc
gccaaggtacaggcacaccaagcaccctactgggaatgcatgagaccgggcatcgttgat
gtccaagacattcaatctctcggaggagttcgtcttcatgacgttgttcgcacttatcaa
cggcaaatgctgtcccagaatttcggcatgattccgctctacatccagagagagacgctc
ttcaagtcttatgagaaccaggttctaatcactagaggtgttcatgaatcgagaagactt
ctaatgatcattcacgatcctcccgcattgcttgcccagccggattcgcttgataattct
atcgaggctcataatggatgggtggccgacggcgtgacacagtatatcgagtgggctgtg
gcccagaagtttggtgtcatggacatcaacatcccttattatgtcactcatccggaggat
acggatccattcactcaacgaacagatgagagagcgatgcagctgcagatacaggagctc
gtatgctacatatgggataattatctgcagctctgggacaacgttgaggagatcttcctc
atgggagttggtttcgcttatcttggagttaagacgctcctgataagcagagattgcaaa
tcaagaatctccggagttgtcaactttgtaaatggcacgctacgtcctgtaaagtctgat
gttgaccaagagctatcttcatggtacaaggaaaattcgcgcgtcttcgttgctgacgat
cacgcatgctggaacgactcggacctgacccgaaaggtgtcgaagaagcgctttggcgcc
gtggtgcatagtccgcatcatggcctcaatcgtatgatgagagcacatgctggcgaagtc
tacaactggatcttggaccgtgttgtggatggccatggagacactactgaggaggataag
gtcaattga
DBGET
integrated database retrieval system
