Phaeoacremonium minimum: UCRPA7_4401
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Entry
UCRPA7_4401 CDS
T03102
Name
(RefSeq) putative pre-mrna-splicing factor atp-dependent rna helicase prp22 protein
KO
K12818
ATP-dependent RNA helicase DHX8/PRP22 [EC:
5.6.2.6
]
Organism
tmn
Phaeoacremonium minimum
Pathway
tmn03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tmn00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
UCRPA7_4401
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tmn03041
]
UCRPA7_4401
Enzymes [BR:
tmn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
UCRPA7_4401
Spliceosome [BR:
tmn03041
]
Complex C
Other components
Step II factors
UCRPA7_4401
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
S1
DEAD
HA2_N
AAA_22
AAA_19
AAA_30
T2SSE
SLFN-g3_helicase
SRP54
Flavi_DEAD
AAA_16
nSTAND3
Motif
Other DBs
NCBI-GeneID:
19324850
NCBI-ProteinID:
XP_007915130
UniProt:
R8BL28
LinkDB
All DBs
Position
Unknown
AA seq
1202 aa
AA seq
DB search
MDDLESLELLSLVSKVTSELQNHLHISDKTLAEFIIAQRVECGNVDEFKTRLSSIAELPQ
SLIESIDRLVLSLHPKFKGQPQNGDRQEPSAEEKANVFKGLAIPDKEPAYDNGAGDAIDD
TLALLEGLEGKAKREKNGANRKRSRSPEDDEDARRRRRKDRYRERDHAEDDYLRDRDGYS
KRKDDYSNGDYSKSKGRKERRTRRDYFDDEDEDNELRRPPTPEMDDSPKLFKVYDGHVTG
IKDFGAFVNLHGIKGKVDGLVHVSALVEGQRVNHPSDLLTRGQNVKVKVVKMEGNRIGLS
MKEVDQVTGEDLAPQARIQSGANMEALGGRNGHGNGNGLNDGIRSAALQNNPSQNRRQKK
RMTSPERWEIRQLIASGVAKASDYPDLEEDYNATLTGEGQLELEEDVDIEIREEEPPFLA
GQTKQSLELSPIRITRAPDGSMNRAAMAGTNLVKERKEIKQQEADAAKEQETKPDLSAQW
QDPMADPDKRRFASDLKQAHMKAKTDEVPEWRRVIAPKDQPLGKRTNMTIKQQRESLPVY
AFRSQLISAVRDNQFMIVVGETGSGKTTQLTQYLAEAGFTNNGMIGCTQPRRVAAMSVAK
RVAEEVGCQLGEEVGYTIRFEDNTSPKTVIKYMTDGMLQREILIDPDLKRYSVIILDEAH
ERTLATDVLFALLKKTAKRRPDLKIIVTSATLDADKFSAYFNECPIFTIPGRTFPVEILY
SKEPESDYLDAALVTVMQIHLTEPMGDILVFLTGQEEIDTACEVLYERMKALGPNVPDLI
ILPIYSALPSEMQSRIFDPAPPGSRKVVIATNIAETSITVDGIYYVVDPGFHKQNAYDPK
LGMDSLVVTPISQAQANQRAGRAGRTGPGKCFRLYTEAAYQTEMLPTTIPEIQRQNLALT
VLLLKGMGINDLIHFDFMDPPPINTLLTALEELYALSALDDEGLLTRLGRKMADFPMEPS
LAKVLIASVDMRCSDEILSIVAMLSLPNVFYRPKEKQAQADQKRAKFFDSTGDHLTLLAV
YNGWKQAAYSSPWCFENFIQARSMRRAKDVRDQLVKIMDRYKHPIVSCGKDTQKVRRALC
SGFFRNSARKDPQEGYKTLIEGTPVYMHPSSALFGKQAEWVIYHNLVLTSKEYLSTVTVI
EPKWLVEAAPTFFKVAPTDRLSKRKQAERIQPLYNKYAGEDDWRLSAQKRVGRSGGGGGT
WG
NT seq
3609 nt
NT seq
+upstream
nt +downstream
nt
atggatgatctagagtcgctcgagctgctgtccctagtgtcgaaggtcacctcggaactg
cagaaccatctccacattagcgacaagacccttgccgaattcatcattgcccagcgggtc
gagtgcggcaatgttgacgagttcaagacaaggctctcctctatcgccgaactacctcag
agtttgatcgagagtatagaccgccttgttctatccctgcatccgaagttcaagggccag
ccacagaacggggacaggcaggagccgtcagcggaagagaaggccaatgtcttcaaaggc
ctggctattcctgacaaggagcccgcctacgacaacggcgccggagacgcaatcgatgat
acgctagcgcttttagaaggtttggagggcaaggcgaagcgggaaaagaatggcgcaaac
cgaaagcgcagcaggagtccagaggacgatgaagatgcgagaaggcgcaggcggaaggat
cgttatcgggaacgggatcatgccgaagacgattacctccgggatcgggatgggtattcc
aagcgcaaggacgattatagcaatggcgactactcgaagagcaagggtcgaaaggagagg
cggacaagaagagattactttgatgatgaggacgaggataatgagttacgccggccgccg
accccggaaatggatgactcccccaagttgttcaaggtctacgacggacatgtcacagga
atcaaagattttggcgccttcgtcaacctccatggaatcaagggcaaggtggatgggcta
gtacacgtgtcggcgctggtcgaaggtcagagggttaatcacccgtcggatctattgaca
agaggtcagaatgtgaaggtcaaggttgtcaaaatggaaggcaacaggataggcctgtcc
atgaaggaggttgaccaagtcactggcgaggatctcgctccccaagcgcgaatacaatct
ggtgcaaatatggaagcattgggtggtagaaacggacacggaaacggaaacggcctgaac
gatggcattcgatctgcagcgcttcaaaacaaccccagccagaacaggcggcagaagaag
cgtatgacgtccccagaacgatgggaaatccgacagttgattgcatctggggttgcaaaa
gcgtcggattaccccgatctcgaggaagattacaatgctactctcacgggcgagggacaa
ttggagttggaagaagatgtcgacatcgagatccgagaggaagaaccgccttttcttgct
ggtcaaacaaagcaatcactggagctctcacccatcagaatcacccgtgctccagacggc
agcatgaatagggctgcaatggctggaacaaacctcgtgaaggaacggaaggaaattaaa
caacaggaggccgacgcggctaaggaacaagaaacgaaacctgatctgtcagcgcagtgg
caggatcccatggctgatcctgataagcggagatttgctagcgatctgaagcaagctcat
atgaaagcaaagaccgacgaagtaccggaatggcggagagtcattgcaccaaaggatcaa
cctctgggaaagcgaacaaacatgacaatcaagcagcaaagagagtccttgcctgtctat
gcctttcgaagccagctcatctcagctgtgagagacaatcagtttatgattgttgttggt
gaaactggctctggcaagactactcagctcacacaatatctcgcagaagccggcttcaca
aacaacggcatgattggctgcacacagccacgtcgtgtagcagccatgtctgtcgccaaa
cgtgttgctgaagaagtgggttgtcaactgggtgaagaagttggttacactatccgtttc
gaggacaacactagtcccaagactgtcatcaagtacatgactgacggtatgcttcaaaga
gagattctgatagatcccgacttgaagagatattctgtcattattcttgatgaggcccac
gaaaggacgctcgcgacagatgttctctttgcgcttttgaagaagactgcaaagaggcgc
cctgatctgaagattatcgtcacctcggccacacttgacgcggacaagttctctgcgtac
ttcaacgaatgcccgatcttcacgatcccgggtcgtactttccccgtcgagattctttac
agcaaagagcccgagtcggattacttggatgcagcgctggttacggtcatgcaaattcac
ttgacagagccgatgggagatatccttgtcttcttgactggtcaagaagagattgatact
gcatgcgaggttctgtacgagcgtatgaaggctttaggacctaatgttccagaccttatc
atcctaccgatctattcggctctgccgagtgagatgcagtccaggatctttgatcccgca
cctcctggaagcagaaaggtcgtcatcgcaacaaacattgccgagacttcaatcacagtg
gatggcatttactatgttgtcgatcccggtttccacaaacagaacgcttacgaccccaag
cttggaatggactcactcgtggtaactccgatctcacaagctcaggccaaccaaagagct
ggccgtgctggccgaaccggaccaggaaagtgtttccgcttgtataccgaggctgcctat
cagacagagatgttgccgacaactattccagaaatccaacgccagaacttagcgctcacg
gtgctgctgttgaagggaatgggcattaatgacctgatccattttgactttatggaccca
cctcctatcaataccttgctcacagccctcgaggagctatacgcattatctgcgctagat
gacgagggattgcttacccggctgggtaggaaaatggcagacttcccaatggagccttcc
ctggccaaggtgttgatcgcgtctgttgatatgcgctgctctgacgagatcctctccatc
gttgccatgctgagtttgccaaacgtcttctaccgaccaaaggagaagcaggctcaggca
gatcagaagagggcgaagttttttgactccacgggagatcaccttacgctacttgctgtc
tacaacgggtggaagcaggcagcatactcatcaccgtggtgttttgagaatttcatccag
gcgcggtcgatgcgtcgtgcgaaggacgtccgggaccagctcgtcaagatcatggaccga
tacaagcatcctatcgtctcctgcggcaaagacacccagaaggtgcgtcgagcactctgc
tcgggctttttccggaactcagccaggaaagatccccaggaaggctacaagactctcatc
gaaggcacaccggtgtacatgcacccttccagcgcactgtttggaaagcaggccgaatgg
gtcatctaccacaacttggtcctgacgagcaaggagtacctgagcaccgtcacggtcata
gagccaaagtggctggtcgaagcggcgcctacattcttcaaagttgcacctacagatcga
ttgtccaagagaaaacaagcggaaaggatccagccgttgtataacaagtatgcaggcgag
gacgattggagattgagtgcacagaagcgcgttggtagatccggtggagggggtggtact
tggggttaa
DBGET
integrated database retrieval system
