Phaeoacremonium minimum: UCRPA7_4506
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Entry
UCRPA7_4506 CDS
T03102
Name
(RefSeq) putative replication factor c subunit 1 protein
KO
K10754
replication factor C subunit 1
Organism
tmn
Phaeoacremonium minimum
Pathway
tmn03030
DNA replication
tmn03410
Base excision repair
tmn03420
Nucleotide excision repair
tmn03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
tmn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
UCRPA7_4506
03410 Base excision repair
UCRPA7_4506
03420 Nucleotide excision repair
UCRPA7_4506
03430 Mismatch repair
UCRPA7_4506
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tmn03032
]
UCRPA7_4506
03400 DNA repair and recombination proteins [BR:
tmn03400
]
UCRPA7_4506
DNA replication proteins [BR:
tmn03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
UCRPA7_4506
DNA repair and recombination proteins [BR:
tmn03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
UCRPA7_4506
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RFC1
BRCT
AAA
Rad17
AAA_22
nSTAND3
AAA_30
AAA_18
AAA_16
AAA_33
AAA_14
RuvB_N
AAA_5
PTCB-BRCT
AAA_19
AAA_28
BRCT_2
Motif
Other DBs
NCBI-GeneID:
19324964
NCBI-ProteinID:
XP_007915231
UniProt:
R8BLD4
LinkDB
All DBs
Position
Unknown
AA seq
1050 aa
AA seq
DB search
MPADIRSFFGGKGGAAPAKAPPKKENDSAKKPRAKGRKVVDDSDEDDEPVAQPKKQAKAT
PKKKAAEPDAVKGTAISANDYFASSKAKPQKVDGTPKSATKTRTQVEIRQSPRSKQPAAP
PAADTAKSATNGIKKKATTTFHKHGLDDDEDAYMDDEDGGDDIFAADIKGRKRKNDDYED
DDSEDEFLPKPKRVASRGKPAVKAEESDQDVKPTATKAAKNGKPAAAGKKRKTPVSDEDS
DDATPRKKAAAKPRAPRAKKAAEPESADFQAIIDAVPTVRPPTPPPKDPNFKFDWRKAAP
GGGNSGPPPNAGAADIPEGEENCLIGMTFVFTGLLKTIGREEAQALVKRYGGKVTGAPSS
KTTFVVLGDDAGPSKLTKIKQLNIKTIDENGLFALIRTAPANGGTGKGAAKAREKQEADQ
EKIKQQAAEMEKEEKARKAEAEKARKAASVRGATGPAQPAANSQLWTTKYAPSQLNQICG
NKGQVEKIQAWLKNWPKARKYDFQKRGADGMGAARAIILSGPPGIGKTTAAHLAAKLEGY
DVIESNASDTRSKKLVENGVSDVMTNTSLLGYFAGDGKKVEDAKKKIVLIMDEVDGMSAG
DRGGVGALAKFCKKTEVPLILICNERRLPKMKPFDFVAFDIKFQRPTVDQVRSRIMTICH
REGLKLPVPVVDALIEGSNKDIRQIINMISTIKLDQTSMDYDQSKSMSKAWEKHVILKPW
DICQKMLAGGLFAPASKATLNDKIELYFNDHEFSYLMIQENYLRTRPMALQGRGYNKREE
NMKYLELMDQAAESISDGDLVDRMIHGPQQQWSLMPTHAVFSSVRPSSFAAGQLLGSNFT
SWLGNNAKSGKLGRYIREIHSHMRLKSSGDHNEIRQQYLPVLWYQLIQRLSVEGKDAVEE
IIDLMDSYYLTREDFDFIKELGIGPQSEDVVNFESQTKAAFTRTYNSMSHPVPFMKASNV
TATKKVAKEMPDLEEAIEEEDDNDVLEPAEADDDETDIKKDKYIKQPKQKAKKATKKPTK
AEDDDEDDDVKPAKGRGKGKAAAAKGKGKK
NT seq
3153 nt
NT seq
+upstream
nt +downstream
nt
atgcctgctgatatccgatcgtttttcggcggcaaagggggcgccgccccagcgaaggcc
ccgcccaagaaggagaacgactcggccaagaaaccacgggcgaagggccgcaaggtcgtc
gatgatagtgacgaagacgatgagcctgtagctcaaccgaaaaagcaggcaaaggccacc
ccgaagaagaaggctgcagaacccgatgccgttaaggggactgccatctccgccaacgac
tatttcgcatcttccaaggcaaagcctcagaaagttgatggcacaccaaaatcagctacc
aaaactcgtacccaggtcgagattcgacaaagtccacggagcaagcagccggctgcacct
cccgcggccgacacagcgaagagtgccacaaatggcattaagaagaaagccacaacaaca
tttcacaagcatggccttgacgacgacgaagatgcatacatggacgatgaagatggaggg
gacgatatcttcgctgctgacattaagggccgtaagagaaagaacgacgactacgaggat
gatgatagtgaggacgagtttctgccaaaacctaaacgggtggcctctcgaggcaagcct
gcagtgaaggccgaggaatcggatcaagatgtgaagcctaccgcaacgaaagcagccaag
aatggcaagccagcagcggccggcaagaagcgaaagactcctgttagtgacgaggattca
gatgatgccactccacgcaaaaaggctgctgctaagcctcgtgctccaagagcgaagaag
gccgcagaaccagagagtgccgacttccaagccatcattgatgctgtccccactgtccga
cctccaacaccaccgcccaaggacccgaacttcaagtttgattggcgaaaggcagctcct
gggggtggtaactccgggcctccgcctaatgcgggcgctgccgatatccctgaaggagag
gagaactgcctgatcggtatgacttttgtttttacgggcttgttaaagaccattggccga
gaagaggctcaagctctcgtcaaacgatatggtggaaaggtcacaggtgcaccgagcagc
aaaaccaccttcgtcgtgctcggcgacgatgcgggccccagcaaactcacaaagatcaag
cagctgaatatcaagacgatcgatgaaaatggtctttttgcactgatacgtactgctccc
gcgaatggaggcaccggcaagggcgccgcgaaggcccgggagaagcaagaggccgatcaa
gagaagatcaaacagcaggcagcagagatggaaaaggaagagaaggcgcgaaaagccgaa
gcagagaaggcccgcaaggccgcgtctgtccgaggtgctaccggcccggctcaaccagca
gccaactctcaattatggacgactaaatatgccccgtctcaactgaaccagatctgcgga
aacaaaggccaagtcgaaaagattcaagcctggttgaagaactggccgaaagcgcgaaag
tatgacttccagaaacgtggagcagatggcatgggagctgcacgtgcgatcattctttca
ggacctccgggcattggaaagactactgcagcacatctcgccgcaaaattggagggatat
gatgtgatagaaagcaacgccagcgacactcgaagcaagaaattggtggagaatggcgtt
agcgatgtcatgaccaacacctctttactaggctatttcgctggagacggcaagaaggtt
gaggatgccaagaagaagatcgtgctcatcatggatgaggtggacggtatgtctgcaggc
gatcgtggtggcgttggcgctctggcgaagttttgtaagaagaccgaagtacccttgatt
ctcatttgtaacgaacgtcgactacccaaaatgaagcctttcgactttgttgcctttgac
atcaagtttcagcgacccacggttgaccaagtccgctctcgaatcatgacaatttgccat
cgcgaaggcttgaagttgcctgttcctgttgtggatgcgcttattgagggcagcaataag
gatattcgacagatcatcaacatgatttcaactatcaaactcgaccagacctctatggac
tacgaccagagcaagtcgatgtcaaaggcatgggagaaacatgtcattctcaagccatgg
gatatttgccagaagatgcttgcgggaggactttttgccccagcgagcaaggcaactctg
aatgacaagatagagctctatttcaacgaccacgaattcagttatcttatgattcaagag
aattacttgcgcacgcgcccgatggcgctacagggcagaggctacaacaagagagaagag
aacatgaaatatctcgaactcatggatcaagctgccgagagcatcagcgatggcgacctt
gttgataggatgatacacgggccccagcaacaatggagcttgatgccaactcatgcagtc
tttagttcggtaaggccttcgagcttcgctgctggtcaactcttgggctccaacttcaca
tcatggcttggaaataacgccaagagtggcaagctgggccgctacatcagggagattcac
tcccatatgagattgaagtcgtctggtgaccataacgagattcgtcagcagtatcttcct
gttctttggtatcagctcatccagagattatctgtggagggcaaagatgctgtcgaagag
ataatagatctgatggacagctactacttgacgagagaggatttcgatttcatcaaggag
ttgggaattggaccgcagtcagaggacgtcgtcaattttgagtcccagaccaaggcggca
tttactcgaacttacaactcgatgtcacaccctgttccgttcatgaaggccagtaatgtt
actgccacgaagaaggtggccaaggagatgcctgatcttgaggaggctatcgaggaagaa
gatgataatgatgttcttgagccagctgaggctgacgatgatgaaaccgatatcaagaag
gacaaatacatcaaacagccgaagcagaaggctaagaaggcaactaagaaacccacaaaa
gctgaggatgatgatgaagacgatgatgtgaaacctgcaaagggacgtggcaaagggaaa
gcagccgctgccaagggcaagggcaagaagtga
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