KEGG   Phaeoacremonium minimum: UCRPA7_4709
Entry
UCRPA7_4709       CDS       T03102                                 
Name
(RefSeq) putative protein transport protein sec13 protein
  KO
K14004  protein transport protein SEC13
Organism
tmn  Phaeoacremonium minimum
Pathway
tmn03013  Nucleocytoplasmic transport
tmn04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:tmn00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    UCRPA7_4709
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    UCRPA7_4709
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:tmn03019]
    UCRPA7_4709
   04131 Membrane trafficking [BR:tmn04131]
    UCRPA7_4709
Messenger RNA biogenesis [BR:tmn03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     UCRPA7_4709
Membrane trafficking [BR:tmn04131]
 Protein recycling
  Rab GTPases and associated proteins
   Rab11 associated proteins
    UCRPA7_4709
 Endoplasmic reticulum (ER) - Golgi transport
  Forward pathways
   Coat protein complex II (COP-II)
    UCRPA7_4709
 Autophagy
  Other autophagy associated proteins
   SEACAT/GATOR2 complex
    UCRPA7_4709
SSDB
Motif
Pfam: Beta-prop_THOC3 Beta-prop_WDR5 Beta-prop_IFT122_1st WD40 WD40_CDC20-Fz WD40_Prp19 Beta-prop_WDR3_1st WD40_WDHD1_1st Beta-prop_EML_2 Beta-prop_CAF1B_HIR1 Beta-prop_RIG_2nd Beta-prop_WDR3_2nd ANAPC4_WD40 Beta-prop_TEP1_2nd WD40_MABP1-WDR62_2nd WDR55 Beta-prop_WDR90_POC16_2nd Beta-prop_EIPR1 WD40_Gbeta Beta-prop_WDR19_1st Beta-prop_TEP1_C Beta-prop_WDR35_TULP_N Beta-prop_WDR36-Utp21_1st Beta-prop_WDR36-Utp21_2nd Beta-prop_Vps41 EIF3I Beta-prop_IFT140_1st Beta-prop_EML Beta-prop_WDR75_1st Beta-prop_SCAP Beta-prop_WDR75_2nd DSE1_N Beta-prop_HPS5 Beta-prop_ELP1_1st WDR90_beta-prop_4th Kelch_1
Other DBs
NCBI-GeneID: 19325187
NCBI-ProteinID: XP_007915451
UniProt: R8BKE6
LinkDB
Position
Unknown
AA seq 288 aa
MHDAVLDYYGRRLATCSSDRTIKIFEIEGETQRLAETLKGHEGAVWSVSWAHPKYGNILA
SAGYDGKVLIWREQQGSWQKLFDFALHKASVNTIAWSPHESGCLLACASSDGNVSVLEFK
DNSYEHSIFPAHGLGVNSVSWAPATTPGSIVSSNPGPGATGNRRFVTGGCDNLLKLWVFD
PTTNSYKPEREPLAGHTDWVRDVAWSPTVLQKSYIASASQDKTVRIWTSDPASPGQWHTK
VLNFEKEVWRVSWSLSGNVLAVSGGDNKVTLWKENLRGEWECVKTMEE
NT seq 867 nt   +upstreamnt  +downstreamnt
atgcacgatgcagttctcgattactacggcaggcggcttgcaacatgctcttcggacaga
acgatcaagatcttcgagattgaaggcgagacacagcgactagcagaaactctgaaaggt
cacgagggggcagtatggagtgtatcctgggcgcacccgaaatacggcaacatcctggca
tcggcgggctacgacggcaaggttctgatctggcgcgagcagcagggctcgtggcaaaag
ctgttcgactttgcgctgcacaaggcctcggtgaacaccatcgcctggtcgccgcacgag
tcgggctgcctgctcgcgtgcgcctcgtccgacggcaacgtctccgtcctcgagttcaag
gacaacagctacgagcacagcatcttccccgcccacgggctcggcgtcaactcggtgtcg
tgggcccccgccacaacgcccggcagcatcgtctccagcaaccccggccctggcgcgacg
ggcaaccggcgcttcgtcacgggcggctgcgacaacctcctgaagctgtgggttttcgac
cccacgacgaacagctacaagcccgagcgcgagccgctggcgggccacacggactgggtg
cgtgacgtagcgtggagcccgacggtgctgcagaagagctacattgcgtctgcgtcgcag
gacaagacggtgcggatctggacctcggacccggccagccccggccagtggcacaccaag
gtgctcaacttcgagaaggaggtgtggcgggtgagctggtcgttgagcgggaacgtgctg
gcggtgagcggcggcgacaacaaggtcacgctgtggaaggagaacctccgcggcgagtgg
gagtgcgtcaagacgatggaggagtag

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