Phaeoacremonium minimum: UCRPA7_535
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Entry
UCRPA7_535 CDS
T03102
Name
(RefSeq) putative transcription initiation factor iif subunit alpha protein
KO
K03138
transcription initiation factor TFIIF subunit alpha
Organism
tmn
Phaeoacremonium minimum
Pathway
tmn03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
tmn00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
UCRPA7_535
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tmn03021
]
UCRPA7_535
Transcription machinery [BR:
tmn03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIF
UCRPA7_535
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TFIIF_alpha
Motif
Other DBs
NCBI-GeneID:
19325895
NCBI-ProteinID:
XP_007911321
UniProt:
R8BWW7
LinkDB
All DBs
Position
Unknown
AA seq
714 aa
AA seq
DB search
MGTPGRQPARDQHRGSLARSPHSVVMSASPSGLPNGRNPPPAGAPPLRRKPRTADPLVAR
KKPVQRPRASGTAQPSNGVQNGSSLPGKVLQPNLGIRTATVRDDQIKAWRARRAANGGWW
DPLPAGGEEFPLIITKRDIKAGNRFHVMRLSQTKSINDVDPTNPLQFERPVNLHRRDPRQ
LPAGRPIKDDSPTPAPADEAEAERLAKLKAERDAQRAIDMSQIAPVAKDANPKKQNQKPE
KSTAQTYYPRSTDAQKKESTIRYEESIPWVLEDDSDGKNVWVGSYTAPLSESNVALVRDN
MGFRVIPLEKYYKFTHRPPFKTYTLDEAEKMMNKKMTAGRWVMRDQEKAKQEAEYDEYRR
YLHGPSRVKLESSTFRAAARSEKQDHDDIDMSGDEFQDDDENQGLESDKDEEVKDSRERI
RREQLGANLFGDADENTVEKEQAEELMEELTRKLHGKETQRALVKLEKHMEYMSDSEDGW
GDSSSDDSGKEDADAKKEGDAQGKGDQKSGTASKGTSTPSSKQKAAENAKKGKSLKRPGS
PNLSESSENELARKKKKQATGSAVPSRSSTPMPGQQRGKANAGATSDGEGEMSDGGRVRK
IKLVTGTGARGTPVGSRAGSPAPGQGQRSPGSASPNAAGPSTPAAGGQGGLVEAWEITQA
LAANPQGISVGQLMRQFQTRVGEGDGQMSRRDWIKLVKDNAKWGADKLLRPKDK
NT seq
2145 nt
NT seq
+upstream
nt +downstream
nt
atgggaacgccaggcaggcagcctgcaagggaccagcatcgcggttctctggcgcgttcc
cctcactccgtcgtcatgagtgcctctccatctggcctgcccaacgggcgcaacccacct
cctgctggtgctcctccactgcgacgcaaaccccgtactgccgatcctctagtcgcgcga
aagaagcctgtccaacgtccgagagcctcgggcacagcgcagccgtcgaacggtgtccag
aatggatcttcgctgcctggcaaagtgttgcagccgaatttgggcatcagaactgcgact
gtaagagacgatcagatcaaggcatggcgagcacgacgggccgccaatggcggttggtgg
gatccattgcccgcggggggcgaggagtttcctctcatcatcacaaagcgagatatcaag
gctggtaaccggttccatgtgatgcgcttgtcgcagacaaagtctatcaatgacgtcgat
cctacgaatcccctacagtttgagcgtcctgtcaatcttcaccgacgtgatcctcgccaa
ttgccggcagggagacccatcaaggacgacagcccgaccccggcgcccgccgacgaagct
gaggctgaacggctggcaaaactcaaagctgaacgggatgctcaacgagctattgatatg
tcgcagattgcgcccgtcgcgaaagatgccaatcccaaaaagcagaaccagaaaccagag
aagtcaactgcccagacctactatcccaggtcgacggatgcccaaaagaaagagtcgacc
attcgctacgaagagtccattccttgggttcttgaggatgattctgatgggaagaatgtc
tgggttggatcctacaccgcaccgctctcagagtccaacgtcgctctggtccgggataac
atgggcttccgtgtgatcccgctagagaaatactacaagttcacccacaggccgcccttc
aagacttacactctggatgaggcagagaagatgatgaacaagaagatgaccgctggtcgt
tgggtcatgagggatcaggagaaggccaaacaggaagcagagtatgatgagtacaggcga
tatctccacggcccgtcccgagtcaagctggagagcagcacttttagagccgctgcaagg
tcagagaagcaggatcatgatgacattgacatgtctggagacgagtttcaggatgatgat
gagaaccagggtcttgaatccgacaaggacgaagaagtgaaggattctcgcgagcgtatt
cgtcgtgagcagctgggtgccaatctttttggtgacgctgatgagaatacggttgagaaa
gaacaagcggaggagctcatggaggagctaactcgcaaattgcatggcaaggaaacacaa
cgtgcccttgtgaagctcgagaagcacatggagtatatgagtgattcggaggacggatgg
ggagattcttcgagtgatgactctggaaaagaagatgcggatgctaagaaagaaggtgat
gcccaagggaagggtgatcagaagtccggtactgcatctaagggtacaagtactccttct
agcaagcagaaggcggctgagaatgctaagaaaggcaagtcgctaaagcggccgggctct
ccaaatttatctgagtcaagcgagaacgagttggcccgaaagaagaagaagcaggccacc
gggtcagccgtgcctagtcgctctagtacgcccatgccgggccagcagcgtggcaaggcg
aacgctggtgccaccagcgatggcgagggtgagatgtcagatggcggacgcgtccgaaag
atcaagcttgttactgggactggtgcgagaggtacccccgtggggtccagagctggaagt
cctgccccggggcaaggacaacggtctcccggctcagcgtctcctaatgcagcgggtcct
tcgaccccagcagccggaggacagggtggactggttgaggcttgggagatcacccaagcc
cttgcagccaatccacagggtatctctgtcggccaacttatgaggcaattccagactcgt
gttggcgaaggtgatggccagatgtcgaggcgggactggattaaactggtaaaggacaat
gccaagtggggtgcagacaagctgttgcgcccaaaggataaataa
DBGET
integrated database retrieval system
