Phaeoacremonium minimum: UCRPA7_5518
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Entry
UCRPA7_5518 CDS
T03102
Name
(RefSeq) putative polysaccharide lyase family 4 protein
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
tmn
Phaeoacremonium minimum
Brite
KEGG Orthology (KO) [BR:
tmn00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
UCRPA7_5518
Enzymes [BR:
tmn01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
UCRPA7_5518
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
fn3_3
CBM-like
Motif
Other DBs
NCBI-GeneID:
19326082
NCBI-ProteinID:
XP_007916256
UniProt:
R8BHT9
LinkDB
All DBs
Position
Unknown
AA seq
558 aa
AA seq
DB search
MSDTYPATGQVLEQYWFLREGETGLHTFSRIAYYNETTPFLRNLQEFRTMFRPNSPIYTH
LLTNDKQYAPLPSDAAESKWIVVQDATWYLGNSPDDAYVQQEADYFTKYTFQDTWRDHDA
HGMFADGSNTPDNSTYGAWLVMNTKDTYFGGPLHSDLIVDGIVYNYIVSNHHGDQTPNIT
NGMDRTFGPQYFHFNHFPAGSDIHTLKADAAQYADPTWNADFYDSIAQYVPNYVPSSQRT
TWKLHVDLPEGAKNPIAVLAQNGIDFQDNVFDTKALQYWANIADDGTAEIPMVKADTYRL
TIYADGIFGQYIKDDVEVIAGEVHTTHARWREETAGTEIFRIGTPDKSSGEYKHGYELDP
THPLHPEEYRIYWAVYDYPTDFPEGVRFKVGESKESEDLNYVHWSVFGGYANYLRPEPYY
GHGDVNNWTIAFDLTDDQIHRKRLATFTVQFAGVKTAAGNTDVYNASEPHANLKYTVNVN
GKDLEPWVIPYYHSSSCAVRSAVICYQVANKFTFDPDLLKEGENEIVLSLPYNATDYESA
VLPQSVYVQYDALRLEIK
NT seq
1677 nt
NT seq
+upstream
nt +downstream
nt
atgtctgatacctatcctgctaccggccaggttctcgagcagtattggttccttcgcgaa
ggcgaaaccggtctacatacctttagtcgcatcgcatattacaacgagaccactcccttc
ttgcgcaatctccaggaattcaggaccatgttccggccaaattcgccaatttacacgcat
ctgctgacgaatgacaaacaatacgctcctctacccagtgatgcagccgagtcaaagtgg
attgtcgttcaagatgcaacctggtatctgggcaactcaccagatgatgcgtatgtccag
caggaagcggactatttcacgaaatataccttccaggatacttggagagaccatgacgcc
catggcatgtttgcagatggcagcaatacccctgacaactcaacatatggtgcttggtta
gttatgaacaccaaggacacctacttcggaggtcccttacacagcgacctcatcgttgat
ggtattgtttataactacattgtctcgaaccaccatggtgatcagactccaaatatcacg
aacggcatggatagaacatttgggccgcagtacttccacttcaaccacttcccagctggt
agtgatatccacactctcaaagccgatgctgcgcagtatgctgacccgacatggaatgcc
gacttctacgactccatcgctcaatatgtgcccaactacgtacccagctctcagagaacg
acctggaagcttcatgtagatcttcctgaaggtgccaagaaccctattgccgtccttgct
cagaatggcatagactttcaggacaatgtcttcgacaccaaggcactgcagtactgggcc
aacatcgccgacgacggcacagctgagatccccatggtgaaggccgacacctaccggctc
accatctatgcggacggtatcttcgggcagtatatcaaggatgacgtcgaggttattgct
ggcgaggtgcacacaacacatgcacgttggcgcgaggagacggcaggcacggaaatcttc
cgcatcggtacccctgacaagagcagcggcgagtacaagcacggctacgaactcgacccc
acgcacccgctgcatccagaagaataccgtatctactgggccgtgtacgactatccgacc
gacttcccagagggcgtgcgattcaaggtcggcgagagcaaggagagcgaggatctgaac
tacgttcactggagtgttttcggcggctatgctaattatctccgccctgagccctactac
ggccatggtgatgtcaacaactggaccattgcctttgatctcacagacgaccagattcac
cggaagaggctagctaccttcaccgtgcaatttgcgggcgtgaagacagccgccggcaac
accgacgtgtacaatgcctcagaacctcatgccaatctgaagtacaccgtgaatgtaaac
ggcaaggatctggagccctgggttattccctactaccattccagctcatgcgccgttcga
tcggccgtgatatgctatcaggtggcgaacaaattcacgtttgacccggacctgctcaaa
gagggcgagaacgagatcgttctgagcctgccttacaacgccaccgactacgagagcgct
gtcctcccccagtcagtgtacgtacagtacgatgcactgcgcctcgagatcaaatag
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