Phaeoacremonium minimum: UCRPA7_5730
Help
Entry
UCRPA7_5730 CDS
T03102
Name
(RefSeq) putative glucose-repressible alcohol dehydrogenase transcriptional effector protein
KO
K12603
CCR4-NOT transcription complex subunit 6 [EC:
3.1.13.4
]
Organism
tmn
Phaeoacremonium minimum
Pathway
tmn03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tmn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
UCRPA7_5730
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tmn03019
]
UCRPA7_5730
Enzymes [BR:
tmn01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.4 poly(A)-specific ribonuclease
UCRPA7_5730
Messenger RNA biogenesis [BR:
tmn03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
UCRPA7_5730
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
UCRPA7_5730
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
LRR_14
Motif
Other DBs
NCBI-GeneID:
19326314
NCBI-ProteinID:
XP_007916465
UniProt:
R8BHF3
LinkDB
All DBs
Position
Unknown
AA seq
464 aa
AA seq
DB search
MCTFLRHLLLFDNQIRTLPYEVGYLFNLEMLGIEGNPLNPEMKQEIMERGTKSLVGLLRE
QAPVPLPPNPRRIITVQEDVAPHLERVKVLTWNILGERYATTQTYGYTPTGALSWDYRKE
AILQEIRDRDADILCLQEVSIDAMREVFGPELAPHDYKGVQFPRSKAKTMSEKDGNAVDG
CAIFYKASKFILLDKQLVDFATIAINRPDMKNQHDIFNRVMPKDNIGMICFFESRATGAR
IIVANAHLAWEPTLADVKIIQTAILMENVTKFAERYARWPPCKDKKMIQIPGAEDERRDL
PEPAPSQEYRNNTDIPLLICGDYNSPDDTSVYELLSRGRVSGDHDDFGGRQYGSFTRDGV
EHPFSLRSAYQHLNGTPDELPFTNYTPGFADVIDYLWYSTNTMEVVDLLGPPDTEYLKRV
PGFPNYHFPADHIQIMAEFVIKARKDKKSLPEPDFGSGSNDRRG
NT seq
1395 nt
NT seq
+upstream
nt +downstream
nt
atgtgtacctttttacggcacctgttgctcttcgacaatcagattcgtactctgccatat
gaggtaggctatctattcaacctcgagatgttgggtattgagggcaatcctttgaatcct
gagatgaagcaagagattatggagagaggaacaaagagcttagtcggactactgcgtgaa
caagcacctgttcctctgccgccaaacccgcgccgtatcatcactgtacaagaagatgtt
gcgcctcacctagaaagggtcaaggtcttgacgtggaacatcttaggcgagagatatgct
actactcagacttacggctacacgcctacaggtgcgctctcttgggactaccggaaagag
gcaattttgcaggagatccgcgatcgggatgccgatatcctttgtctccaggaggtttcg
attgatgctatgcgagaggttttcggcccagaacttgcacctcatgattacaagggcgta
cagttcccgaggtccaaagctaagactatgtccgagaaagatggcaatgctgttgatggt
tgtgcgatattctacaaagcaagcaagttcatcttgctcgacaagcaactcgttgacttt
gcgacaattgcaatcaacaggcctgatatgaagaatcagcacgacattttcaaccgagtc
atgcccaaagacaatatcggcatgatttgcttcttcgagagccgtgctacgggtgctcgg
atcattgtggccaacgcacatcttgcgtgggaacctacactggctgatgtgaagatcatt
cagacagcaattctcatggaaaacgttacaaagtttgccgagagatacgctaggtggccg
ccatgcaaggacaagaaaatgatccaaattccaggagctgaggacgaacggagagaccta
ccagaaccggccccatcacaggaataccggaacaacactgatatacctcttcttatctgt
ggtgattacaactcccctgatgatacttccgtgtatgaactgctctctcggggacgagtc
tctggtgatcacgacgattttggaggtagacagtacggcagcttcactagggacggtgtc
gaacatcctttcagcctccgatcggcataccagcacttgaacggtactccggacgaactt
ccgttcacgaactacacacctggttttgccgatgtcatcgactatctatggtactcgacc
aatactatggaggtggtggacttgctgggaccgcccgacacagaatatctcaaacgggtt
cccggtttccctaattaccacttcccagctgatcacatccagatcatggccgagttcgtg
atcaaggcacgcaaggacaagaaatcgttgcctgagccggattttggatcggggagcaat
gaccggagaggttaa
DBGET
integrated database retrieval system
