Phaeoacremonium minimum: UCRPA7_5893
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Entry
UCRPA7_5893 CDS
T03102
Name
(RefSeq) putative atp dependent rna helicase protein
KO
K14779
ATP-dependent RNA helicase DDX52/ROK1 [EC:
5.6.2.7
]
Organism
tmn
Phaeoacremonium minimum
Brite
KEGG Orthology (KO) [BR:
tmn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tmn03009
]
UCRPA7_5893
Enzymes [BR:
tmn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
UCRPA7_5893
Ribosome biogenesis [BR:
tmn03009
]
Eukaryotic type
90S particles
Helicases
UCRPA7_5893
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
19326494
NCBI-ProteinID:
XP_007916628
UniProt:
R8BH34
LinkDB
All DBs
Position
Unknown
AA seq
699 aa
AA seq
DB search
MDILRVLSRGIKQAPRKEGASTQSASKLPSAGTRTNPQLFHDEVGSKNLKRKRTTEVTKE
ETEEELSDLDFFAPKTEVKGERKHHQKKPTEEPPNKPGQRPKLLDEDECRQLLRSHRLKF
TLLSSRQEKKTKVKKSKKKKALKVEPTEEKKQLFPQPLKSFSELRSTYDVSSRLADNLDA
QSYKIPTEVQLASLPLLLRPEVALPSLDGDNTWGEGVDFMAVAPTGSGKTLSFLIPAING
VMRRKAQDKSRKEHQLEAIVIAPTRELANQIVNEGRKLTVGTGVRVVAMKKGMRVAAETP
DGAQGSDDEVSDDDSDDDSGAEGGDDSSKPVTKADVLVTTPMLLLNFLKRGSSKKNLPTV
QSLILDEADVLLDPLFRDQTLGIWSACTNSDLRLTFWSATIGSNIETLISDQLSSHAMSR
GLSVKPLVRLVVGLKDTAVPNITHKLIYTATEPGKLLALRQLLHPVSGADSGPPLRPPFL
VFTQTIERATALHEELKYDIPLEAGGPSRIAVLHSSLADSIRSDIMRRFRAGEIWVLVTT
DVLARGVDFAGVNGIVNYDVPGSAAAYVHRAGRTGRAGREGGVAVTFYTKEDIPFVKSVA
NVIALSEKQAGKASNEADVQQWLLDALPNVKKEDKKRLKTHGVEARRSGAKAKITSKSAW
ERRKENNKRGAIQGSKRRKTQDQGAGDGAAETEWSGLDD
NT seq
2100 nt
NT seq
+upstream
nt +downstream
nt
atggatatcctaagagtcctctcgcgaggcatcaaacaggccccgagaaaagagggagcc
tcgacacagtccgccagcaagcttccctccgctggtacccgaacaaatccccaactcttc
cacgatgaagtcggatccaagaacctgaagcgcaaacggaccacggaagtgacgaaggaa
gaaactgaggaggaactgagcgaccttgacttcttcgcccccaagaccgaggttaaaggc
gagcgcaaacaccaccagaaaaagcccacggaggagccaccgaacaaaccgggacaaaga
ccaaaattgcttgacgaagacgaatgtcggcaattgctacgatctcatcgactcaagttt
actttgctctcttctcggcaagaaaaaaagacaaaggtgaagaagagtaagaagaaaaag
gcactaaaagtcgagccgacggaggagaagaagcaactgtttcctcaaccactgaagtcg
ttcagcgagcttcgctctacgtacgacgtctcttctcgacttgccgataatctggacgcc
cagagctacaaaataccaaccgaagttcaacttgcgagcctgccgctactccttcgccct
gaagttgctctacctagtcttgatggagataatacatggggagaaggtgtcgatttcatg
gcggttgcgcctactggaagtggaaagacgctcagtttcctcataccggccatcaatggt
gtaatgcgccggaaagctcaggacaagtctcggaaagagcaccagctggaggcaattgtc
atcgcccccaccagagaacttgcgaaccaaattgtcaacgaggggcggaagctcaccgtc
ggtacgggagtcagggtcgttgctatgaaaaaagggatgagggtcgcggctgagactcct
gatggcgctcaaggaagtgacgatgaggtctctgatgacgattcagacgacgactcggga
gcggaaggaggagacgattcctctaagcctgtcaccaaagctgatgttcttgttacaaca
ccgatgttactgctcaattttctgaagcgcggctcatcgaagaagaacctccctaccgtg
cagtccttgattctggatgaagctgatgtcctacttgatccactcttcagagaccaaacc
ctcggtatctggtcagcttgcacaaactcagaccttcgtctcacattttggtcagcaacg
ataggctctaatattgaaacgttgatttcggatcaactaagctcacatgcgatgtcgcga
ggtctatcggttaaaccactggttagacttgttgtcggcctgaaggatactgctgtgcct
aacatcacccataaactcatatatacggctacggagccaggcaaactgcttgctctccgc
cagctgcttcatcctgtatctggcgccgactctggtccaccgttacggccgcctttcctg
gtctttacacagacgatcgaacgagctacagcccttcatgaggagctcaaatacgacatc
ccattagaggctggcggtccgtccagaattgcggtgctccattcttccctagcagactca
attcgatcagatatcatgcgacggttcagggccggcgagatctgggtcctcgtcaccacc
gatgtgctggcacgaggagtcgatttcgcaggtgtcaacggaattgtcaattacgatgtc
cccggctcagctgccgcgtatgtccatcgcgcgggcaggactggtcgagcgggccgcgag
ggtggtgttgccgtcacattctacacgaaggaagatataccgttcgtcaagagcgttgcc
aacgttattgcgcttagcgagaagcaagctgggaaagcgagcaatgaggcagatgtccag
cagtggttgttggatgcccttcctaatgtgaagaaggaagacaagaagcggctgaagacc
cacggtgttgaagctaggcggtctggcgccaaagcaaagatcacgtcaaagagtgcttgg
gagagacgaaaagagaataacaagcgaggtgctattcaggggagcaagcggagaaaaaca
caagatcaaggtgctggagatggagcggctgagacagagtggagtgggcttgatgattaa
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