Phaeoacremonium minimum: UCRPA7_5967
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Entry
UCRPA7_5967 CDS
T03102
Name
(RefSeq) putative dna-directed rna polymerase ii subunit rpb2 protein
KO
K03010
DNA-directed RNA polymerase II subunit RPB2 [EC:
2.7.7.6
]
Organism
tmn
Phaeoacremonium minimum
Pathway
tmn03020
RNA polymerase
tmn03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
tmn00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
UCRPA7_5967
09124 Replication and repair
03420 Nucleotide excision repair
UCRPA7_5967
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tmn03021
]
UCRPA7_5967
03400 DNA repair and recombination proteins [BR:
tmn03400
]
UCRPA7_5967
Enzymes [BR:
tmn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
UCRPA7_5967
Transcription machinery [BR:
tmn03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
UCRPA7_5967
DNA repair and recombination proteins [BR:
tmn03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
UCRPA7_5967
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_5
RNA_pol_Rpb2_4
RNA_pol_Rpb2_3
Motif
Other DBs
NCBI-GeneID:
19326575
NCBI-ProteinID:
XP_007916701
UniProt:
R8BGT8
LinkDB
All DBs
Position
Unknown
AA seq
1264 aa
AA seq
DB search
MADYEEGYEYEEDYGEADEGITPEDCWTVISSYFEKKGLVSQQIDSFDEFTQTGIQSLID
EYSHLTLDQNNPPSADDRAIQLRRYEIKFGHMLVTRPTITENDGSVKALLPYECRDRNLT
YSCPIYVKLTKKVSIAVEEDIPLNELDEEQLAEYHATNKPPTRIVWEEEEAETGAGLNDK
DKSNEQLRDMVFIGKIPVMVKSKICHLKDEDDDGLFVLNECPYDQGGYFVINGSEKVLIA
QERSAANIVQVFKKAQPSPDSYVAEIRSALEKGSRLISSLQLKLKAKGEAARGGYGQTIH
ATLPYIKADIPIGIVFRALGIVSDEDILNHICYDRNDSQMLEMLRPCVEEAFCIQDREVA
LDFIGKRGNNTHSVNRRDRIRSAKDILQKEMLPHISQSEGCETRKAFFLGYMVHKLLQCA
LGRRETDDRDHFGKKRLDLAGPLLAKLFRNIVRKLTQDMMAYLKRCVQENKMFDLTLGIR
PSTLTGGLKYSLATGNWGDQKKAMSSTAGVSQVLNRYTFASTLSHLRRTNTPIGRDGKLA
KPRQLHNTHWGLVCPAETPEGQACGLVKNLSLMCYVSNGTPADPIIEFMIARNMEVLEEY
DPLRHPHATKIFVNGTWVGVHSDPKHLVSLVQNLRRKGVISSEVSLVRDIRDREFKIFSD
AGRVMRPLFVVEQEDNADTGLPKGSLVLTKEHISRLEQDQGLAKDDPAFFGWDGLEHSGV
IEYLDAEEEETAMICMSPEDLETYRLQKAGYDLPDAGHEDLNARVKTKINPTTHMYTHCE
IHPSMLLGICASIIPFPDHNQSPRNTYQSAMGKQAMGFFLTNYSRRMDTMANILYYPQKP
LATTRSMEFLKFRELPAGQNAIVAIACYSGYNQEDSVIMNQSSIDRGLFRSLFFRSYTDS
EKRVGINLVESFEKPYRSDTLRLKHGTYDKLDDDGIIAPGVRVSGEDIIIGKTAPINPDA
QELGQRTQQHVKRDASTPLRSTESGIVDSVVVTTNQDGLRYVKVRVRTTKIPQIGDKFAS
RHGQKGTIGVTYRTEDMPFTREGITPDIIINPHAIPSRMTIAHLIECLLSKVSTLKGMEG
DATPFTEVTVDSVSTLLRQHGYQSRGFEIMYHGHTGRKLRAQVFFGPTYYQRLRHMVDDK
IHARARGPVQIMTRQPVEGRARDGGLRFGEMERDCMIAHGAAAFLKERLFEVSDAFRVHI
CEICGLMTPIANLTKQSFECRPCKNKTKIAQVHIPYAAKLLFQELAAMNIASRMFTDRSG
VSIR
NT seq
3795 nt
NT seq
+upstream
nt +downstream
nt
atggcggactacgaggagggctatgagtacgaggaggattacggcgaagctgacgagggc
atcacgcccgaggattgctggactgtcatctcctcgtatttcgaaaagaagggccttgtg
tcccagcagattgactctttcgacgagttcacccagaccggaattcagagcttgattgat
gagtattcgcatctcaccctcgaccagaataatccaccctctgccgatgaccgtgcgatc
cagcttcgacgttacgaaatcaagttcgggcacatgctagttacacgcccgaccatcaca
gagaacgatggcagcgtcaaggcgctactgccgtacgagtgtcgtgatcgaaacctaacg
tactcttgtcctatatacgtcaagctcaccaagaaggtctccattgccgtcgaagaggat
attcccttgaacgaacttgacgaagagcaactcgccgaatatcatgcgacgaacaagccc
cccacacggatcgtgtgggaggaggaggaggcagagacgggtgccggtctgaacgataag
gacaagtccaacgagcagctgagagacatggtgttcatcggaaagatccccgtgatggtc
aaatccaagatttgtcacctcaaggatgaggatgatgatggtttgttcgttctgaacgag
tgtccgtatgaccaaggtggctactttgtcatcaacggaagcgagaaggttctcattgct
caggagcgctccgccgccaacatcgtccaagttttcaagaaagcccagcctagcccagac
tcatatgttgctgagatccgcagcgctttagagaagggttcccggctgatatcttcgctt
cagcttaagctcaaggcaaagggcgaagcggcgcgaggcggctacggtcagactatacat
gctactctaccctacatcaaggccgatatccctattggtatcgtttttcgtgctctgggt
atcgtgtcagacgaagatatcctcaaccatatctgctacgacagaaacgacagccagatg
ttggagatgctccgcccttgtgttgaggaagctttctgcattcaggaccgcgaggtggcg
ttggacttcatcggaaagcgtggcaataacacgcacagcgttaaccgaagggatcgtatt
cgatcggccaaggatatcctccagaaggagatgcttccacacatctctcaatcagaaggc
tgcgaaactcgcaaggccttcttcctcggctacatggtccacaaactcctccagtgtgcc
cttggccgacgcgagacggatgatcgagaccattttggcaagaagcggttggatttggcc
gggcctctcctcgctaaacttttccgcaatatcgttcgaaaacttacgcaagatatgatg
gcgtacctgaagcgttgcgtacaggagaacaagatgtttgacctgacgttgggtattcgt
ccctcgactcttaccggcggtctgaagtactctttggctaccggaaactggggtgaccag
aagaaggctatgagctcgactgctggtgtttctcaagtcttgaacagatataccttcgcg
tctaccttgtcacatttgcgacggacgaatacgcctattggacgagacggcaaactggcg
aagccccgccagctccacaatactcattggggcctggtctgcccggcagagacgccagaa
ggtcaggcctgcggtttggtgaagaatctctcgttgatgtgttacgtcagtaacggtacg
ccggctgatccaatcatcgagttcatgatcgcgcggaacatggaagtcctggaagaatat
gatcctctcagacacccgcacgcgaccaagatttttgtaaacggaacatgggtgggtgta
cactccgaccccaagcatcttgtcagcctggtccagaaccttcgacgtaagggtgtcatt
agttctgaggtctcgctcgtcagagatatccgtgaccgtgagttcaagatcttttccgat
gctggtcgagtcatgagacctctcttcgtggtcgagcaagaggacaacgcggataccggc
ctgcctaaaggatctctggtactcaccaaggaacacatctcaaggcttgagcaagatcaa
ggtctcgccaaagatgaccctgccttctttggctgggacggtcttgaacattcaggtgtt
atcgaatatcttgatgcagaagaagaggaaacggcaatgatttgcatgagccccgaggac
cttgaaacctaccggcttcaaaaagctggctacgatcttccagatgccggtcacgaagat
ctcaacgcgcgtgtcaagactaagatcaaccccacgactcacatgtatacacactgcgag
atccaccccagcatgttgttgggaatctgcgccagtattattcccttccccgatcacaat
cagtcgccgcgtaatacctaccagtctgccatgggtaagcaagccatgggcttcttcctc
accaattattcccgccgaatggatacaatggcgaacattctctactaccctcagaaacca
ctggccacaactcggtccatggagttccttaagttccgtgagctgccagccggacagaat
gctattgtggccatcgcttgttactctggttacaaccaggaagattccgtcattatgaac
cagagcagcatcgaccgtggtcttttccgaagtctgttcttccgttcctacaccgactct
gagaaacgggttggtatcaacctcgtcgagtcttttgagaaaccgtatagaagcgacaca
cttcggctgaaacacggcacttacgataagcttgatgatgatggcattattgctcctggt
gtgagagtttccggtgaggacatcattatcggcaagacggcgccaatcaaccccgacgca
caggagttggggcaacgtacgcagcaacatgtgaagcgtgacgcatccacacctctgagg
tctaccgagagcggtatcgttgactctgtggtggttacgacgaaccaagatggtctccga
tacgtcaaggtccgagtgcgcacgacgaagattccacaaatcggtgataaatttgcatct
cgtcacggtcagaagggtactattggtgtcacttaccgtacagaggatatgcccttcact
cgcgaaggaatcacccccgatatcatcatcaacccccacgccattccgtcacgtatgacc
atcgcccatctgatcgagtgtcttctgtccaaggtctcaaccctgaaaggcatggaaggt
gatgcaactccgttcaccgaagttacggtcgactctgtgtccaccctcctgagacaacac
ggatatcagtcacgtggattcgagatcatgtaccatggtcatactggtcgtaaactgcga
gcccaggttttcttcggtcctacctactatcagcgtctgcgacacatggtggacgataag
attcatgcccgagctcgtggtcccgtccaaatcatgacgcgacagcctgtagagggtcgt
gcgagagatggtggtctccgtttcggagagatggagcgtgattgtatgatcgctcatggt
gctgctgccttcctaaaggagagactgtttgaggtgtcggatgccttccgagttcacatt
tgcgagatttgtggacttatgactccgattgccaacctcacgaaacaatcattcgaatgc
cgtccctgcaagaacaagacaaagattgctcaggttcacattccgtatgctgccaagctg
ctcttccaggaactggctgccatgaacatcgcctcgaggatgttcaccgatcgttctggt
gtatccattcgctaa
DBGET
integrated database retrieval system
